mRNA_P-littoralis_Contig1.299.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1.299.1
Unique NamemRNA_P-littoralis_Contig1.299.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1.299.1 vs. uniprot
Match: D8LI17_ECTSI (Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI17_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 1.680e-133
Identity = 182/196 (92.86%), Postives = 192/196 (97.96%), Query Frame = 1 
Query:  106 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIASNSELEGKSLDDIMKTSTGGVFNNAAQVWNHSFYWKSLSPSGGGEPTGAVKEAIEKKFGSFDEFKKAFSDTAAGHFGSGWAWLVKNESGEVEVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENFAKC 693
            M+IVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAI++NSELEGKSLD+IMKT++GGVFNNAAQVWNH+FYWKSLSPSGGGEPTGAVKEAIE+KFGSF+ FKKAFSDTAAGHFGSGWAWLVK ESG V+VVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANEN AKC
Sbjct:    1 MSIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAISTNSELEGKSLDEIMKTASGGVFNNAAQVWNHTFYWKSLSPSGGGEPTGAVKEAIEEKFGSFEAFKKAFSDTAAGHFGSGWAWLVKTESGGVDVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENLAKC 196
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BLAST of mRNA_P-littoralis_Contig1.299.1 vs. uniprot
Match: A0A7S2V2G5_9STRA (Superoxide dismutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G5_9STRA)

HSP 1 Score: 306 bits (784), Expect = 2.360e-99
Identity = 134/195 (68.72%), Postives = 162/195 (83.08%), Query Frame = 1 
Query:  106 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIASNSELEGKSLDDIMKTSTGGVFNNAAQVWNHSFYWKSLSPSGGGEPTGAVKEAIEKKFGSFDEFKKAFSDTAAGHFGSGWAWLVKNESGEVEVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENFAK 690
            MAI LP LP+ K ALAPHIS ET+ +HY KHHA YVTKLNAA+   SE EGKSL++IM  ++GG+FNNAAQ+WNH+FYW S+SP+GGGEP+G + +AI   FGSF+ FK+ FS +A GHFGSGWAWL K + G +E+V THDASNP+KEGKG PILTCDVWEHAYYIDYRN+RP YIAAWWN++NWDFAN N+ +
Sbjct:    1 MAIQLPPLPYEKGALAPHISEETLSFHYEKHHAGYVTKLNAALPG-SEFEGKSLEEIMMNASGGMFNNAAQIWNHTFYWNSMSPNGGGEPSGPISDAINSSFGSFESFKEKFSASAGGHFGSGWAWLCKKDDGSLEIVDTHDASNPLKEGKGKPILTCDVWEHAYYIDYRNARPSYIAAWWNVINWDFANSNYTE 194
[Close]
BLAST of mRNA_P-littoralis_Contig1.299.1 vs. uniprot
Match: A0A6V1U4U1_HETAK (Superoxide dismutase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U4U1_HETAK)

HSP 1 Score: 302 bits (774), Expect = 2.210e-97
Identity = 137/217 (63.13%), Postives = 166/217 (76.50%), Query Frame = 1 
Query:   37 RCFSFFSTLSALPEKHRSSNSSIMAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIASNSELEGKSLDDIMKTSTGGVFNNAAQVWNHSFYWKSLSPSGGGEPTGAVKEAIEKKFGSFDEFKKAFSDTAAGHFGSGWAWLVKNESGEVEVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENFA 687
            R F F+ +++   +  R+  ++IM I LP LP+ KDALAPHISAET+EYHYGKHHA YV KLNAAI      + K++D IM    GG++NNAAQ+WNH+FYWKS+SPSGGG PTG + +AI   FGSFD FK+ FS  A GHFGSGWAWL KN  G + +  THDA N +KEG GTP+LTCDVWEHAYYIDYRN+RP Y+AAWWNL+NW+FANEN A
Sbjct:   10 RSFCFWPSIAHFQQLRRTLLTTIMPIELPALPYEKDALAPHISAETLEYHYGKHHAGYVAKLNAAIEGTDHAD-KTVDQIMMECEGGLYNNAAQIWNHTFYWKSMSPSGGGAPTGPIADAINASFGSFDAFKEQFSAVAGGHFGSGWAWLCKNADGSLSIQETHDAGNVLKEGLGTPLLTCDVWEHAYYIDYRNARPQYVAAWWNLINWEFANENLA 225
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BLAST of mRNA_P-littoralis_Contig1.299.1 vs. uniprot
Match: A0A0G4G4J6_VITBC (Superoxide dismutase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G4J6_VITBC)

HSP 1 Score: 297 bits (760), Expect = 9.730e-96
Identity = 133/195 (68.21%), Postives = 153/195 (78.46%), Query Frame = 1 
Query:  106 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIASNSELEGKSLDDIMKTSTGGVFNNAAQVWNHSFYWKSLSPSGGGEPTGAVKEAIEKKFGSFDEFKKAFSDTAAGHFGSGWAWLVKNESGEVEVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENFAK 690
            MA  LP LPWAK+ LAPHIS ETI YHYGKHHA YVTKLN  +   +E   K L D++KT+ GG+FNNAAQ WNHSFYW SLSPSGGGEP GA+K AIE+ FGSF +FK  FS  AAGHFGSGW WLVK   G++++  THDA NP+++G G P+LTCDVWEHAYY+DYRN RP Y+ AWWNLVNWDFAN N AK
Sbjct:    1 MAFQLPALPWAKNGLAPHISEETINYHYGKHHATYVTKLNGLV-EGTENAKKDLADLVKTTDGGLFNNAAQHWNHSFYWNSLSPSGGGEPKGAIKAAIEQDFGSFQKFKDDFSANAAGHFGSGWVWLVKGTDGKLKIHQTHDAGNPLRDGAGVPLLTCDVWEHAYYVDYRNDRPSYVKAWWNLVNWDFANNNLAK 194
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BLAST of mRNA_P-littoralis_Contig1.299.1 vs. uniprot
Match: A0A356T2V4_9DELT (Superoxide dismutase n=2 Tax=Myxococcales TaxID=29 RepID=A0A356T2V4_9DELT)

HSP 1 Score: 293 bits (749), Expect = 3.840e-94
Identity = 131/190 (68.95%), Postives = 157/190 (82.63%), Query Frame = 1 
Query:  106 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIASNSELEGKSLDDIMKTSTGGVFNNAAQVWNHSFYWKSLSPSGGGEPTGAVKEAIEKKFGSFDEFKKAFSDTAAGHFGSGWAWLVKNESGEVEVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFAN 675
            MA  LPELP+AKDALAPHIS ET+E+HYGKHH  YV KLN A+  ++ L+GKSL+D++KT  GGVFNNAAQVWNH+FYW SLSP+GGGEPTG + +AI+K FGSF +FK+ FS  A+GHF SGWAW+V +  G +++V  HDA NP+  GK TP+LTCDVWEHAYYIDYRN+RP YIAAWWNLVNWD AN
Sbjct:    1 MAFTLPELPYAKDALAPHISKETLEFHYGKHHQGYVNKLNKAVEDDASLQGKSLEDLIKTQKGGVFNNAAQVWNHTFYWNSLSPNGGGEPTGKIADAIKKSFGSFSDFKEQFSKAASGHFASGWAWVVTSGDG-LDIVDLHDAGNPLTMGK-TPVLTCDVWEHAYYIDYRNARPDYIAAWWNLVNWDHAN 188
[Close]
BLAST of mRNA_P-littoralis_Contig1.299.1 vs. uniprot
Match: A0A835ZFU3_9STRA (Superoxide dismutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFU3_9STRA)

HSP 1 Score: 292 bits (747), Expect = 1.010e-93
Identity = 134/193 (69.43%), Postives = 161/193 (83.42%), Query Frame = 1 
Query:  109 AIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIASNSELEGKSLDDIMKTSTGGVFNNAAQ--VWNHSFYWKSLSPSGGGEPTGAVKEAIEKKFGSFDEFKKAFSDTAAGHFGSGWAWLVKNESGEVEVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANEN 681
            +IVL  LP+AK+ALAPHIS ET+EYH+GKHHAAYVTKLNAAIA+++ L+ K+L++IM +S+GG F+NAAQ  V+NH FYW SLSP GGG PTG + +AI++ FG FD+FK AF   A GHFGSGWAWLVK + G ++VV THDASNPV E  G PI+TCDVWEHAYYIDYRN+RP Y+AAWWNLVNWDFAN N
Sbjct:    4 SIVLMTLPYAKNALAPHISEETLEYHHGKHHAAYVTKLNAAIAADAGLQNKTLEEIMLSSSGGTFSNAAQASVFNHDFYWHSLSPEGGGTPTGPIADAIKESFGDFDKFKAAFDAAAGGHFGSGWAWLVKADDGSLKVVSTHDASNPVVEKLGKPIITCDVWEHAYYIDYRNARPSYLAAWWNLVNWDFANVN 196
[Close]
BLAST of mRNA_P-littoralis_Contig1.299.1 vs. uniprot
Match: A0A2T6E734_9GAMM (Superoxide dismutase n=4 Tax=Saccharospirillum TaxID=231683 RepID=A0A2T6E734_9GAMM)

HSP 1 Score: 288 bits (737), Expect = 2.630e-92
Identity = 132/195 (67.69%), Postives = 158/195 (81.03%), Query Frame = 1 
Query:  106 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIASNSELEGKSLDDIMKTSTGGVFNNAAQVWNHSFYWKSLSPSGGGEPTGAVKEAIEKKFGSFDEFKKAFSDTAAGHFGSGWAWLVKNESGEVEVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENFAK 690
            MA  LP LP+AKDAL PHIS ET+EYH+GKHH  YVTKLN  +   +E EGKSL+DI+K+++GG+FNNAAQ+WNH+FYW  LSP+GGG PTGAV +AI  K+GSFD F+K F + AAG+FGSGW WLVKN  G VE+V T DA  P+  G+ TP+LT DVWEHAYYIDYRNSRP Y+AA+W LVNW+FANENFAK
Sbjct:    1 MAFELPALPYAKDALEPHISQETLEYHHGKHHNTYVTKLNGMVPG-TEFEGKSLEDIIKSASGGMFNNAAQIWNHTFYWHCLSPNGGGAPTGAVADAINGKWGSFDAFQKEFDEKAAGNFGSGWTWLVKNSDGSVEIVNTDDAGTPITSGQ-TPLLTVDVWEHAYYIDYRNSRPDYLAAFWKLVNWEFANENFAK 193
[Close]
BLAST of mRNA_P-littoralis_Contig1.299.1 vs. uniprot
Match: W7T7U7_9STRA (Superoxide dismutase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7U7_9STRA)

HSP 1 Score: 287 bits (735), Expect = 5.830e-92
Identity = 130/196 (66.33%), Postives = 156/196 (79.59%), Query Frame = 1 
Query:  106 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIASNSELEGKSLDDIMKTS-TGGVFNNAAQVWNHSFYWKSLSPSGGGEPTGAVKEAIEKKFGSFDEFKKAFSDTAAGHFGSGWAWLVKNESGEVEVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENFAK 690
            MAI LP LPW K+ALAPHISAETI+YHYGKHHAAYVTKLN  I  +    GKS+ +IM  +  GG+FNNAAQVWNH+FYW S++P+ GG P+G + + I   FGSFD FK  FS  AAGHFGSGWAWLV  + G++EVV THDASNP+KEG GTP+LTCDVWEHAYY+DYRN+RP Y+ AWW+LVNW++AN   A+
Sbjct:    1 MAIELPPLPWDKNALAPHISAETIDYHYGKHHAAYVTKLNGMIKDDPAYAGKSVKEIMLAAPAGGLFNNAAQVWNHTFYWNSMAPNAGGAPSGPIADKINAAFGSFDNFKSQFSTAAAGHFGSGWAWLVLKD-GKLEVVSTHDASNPLKEGLGTPLLTCDVWEHAYYVDYRNARPAYVEAWWSLVNWEWANARLAE 195
[Close]
BLAST of mRNA_P-littoralis_Contig1.299.1 vs. uniprot
Match: A0A2T4D4F0_9GAMM (Superoxide dismutase n=2 Tax=Pseudidiomarina aestuarii TaxID=624146 RepID=A0A2T4D4F0_9GAMM)

HSP 1 Score: 284 bits (727), Expect = 8.690e-91
Identity = 130/194 (67.01%), Postives = 157/194 (80.93%), Query Frame = 1 
Query:  106 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIASNSELEGKSLDDIMKTSTGGVFNNAAQVWNHSFYWKSLSPSGGGEPTGAVKEAIEKKFGSFDEFKKAFSDTAAGHFGSGWAWLVKNESGEVEVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENFA 687
            MA  LP LP+ K+AL PHISAET+EYHYGKHHAAYVTKLN A+   ++LE KSL+D++KT++GG+FNNAAQVWNH+FYW  LSP+GGGEPTGA+ +AI KKFGSF +FK+ FS  AAG+FGSGW WLVK   G V++  T DA  P+ +   TPILT DVWEHAYYIDYRN+RP Y+ A+WNLVNWDF  +NFA
Sbjct:    1 MAFELPALPYEKNALEPHISAETLEYHYGKHHAAYVTKLNDAV-KGTDLENKSLEDVIKTASGGLFNNAAQVWNHTFYWHCLSPNGGGEPTGALADAINKKFGSFAKFKEEFSAQAAGNFGSGWTWLVKTADGGVDITNTDDAETPITDSSITPILTVDVWEHAYYIDYRNARPKYLDAFWNLVNWDFVAKNFA 193
[Close]
BLAST of mRNA_P-littoralis_Contig1.299.1 vs. uniprot
Match: A0A7C5EH16_9BACT (Superoxide dismutase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5EH16_9BACT)

HSP 1 Score: 283 bits (724), Expect = 2.220e-90
Identity = 132/192 (68.75%), Postives = 154/192 (80.21%), Query Frame = 1 
Query:  106 MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIASNSELEGKSLDDIMKTSTGGVFNNAAQVWNHSFYWKSLSPSGGGEPTGAVKEAIEKKFGSFDEFKKAFSDTAAGHFGSGWAWLVKNESGEVEVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANEN 681
            M+  LPELP+AKDAL+PHISAET+EYH+GKHHAAY  KLNA +   S  E  SLDDI+K + GG+FN AAQ +NHSFYWK LSP+GGG P GA+ +AI + FGSFD FK AF+  A GHFGSGWAWLVKN  G++EV  THDA  P+++G   PILTCDVWEHAYYIDYRN+RP YI A+WNLVNWDFANEN
Sbjct:    1 MSYELPELPYAKDALSPHISAETLEYHHGKHHAAYTNKLNAMLPG-SGFEEASLDDIIKKADGGLFNQAAQYFNHSFYWKCLSPNGGGTPKGAIADAINESFGSFDAFKDAFTKAAGGHFGSGWAWLVKNADGKLEVTSTHDAGCPIRDG-AKPILTCDVWEHAYYIDYRNARPKYIEAFWNLVNWDFANEN 190
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI17_ECTSI1.680e-13392.86Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S2V2G5_9STRA2.360e-9968.72Superoxide dismutase n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1U4U1_HETAK2.210e-9763.13Superoxide dismutase n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4G4J6_VITBC9.730e-9668.21Superoxide dismutase n=1 Tax=Vitrella brassicaform... [more]
A0A356T2V4_9DELT3.840e-9468.95Superoxide dismutase n=2 Tax=Myxococcales TaxID=29... [more]
A0A835ZFU3_9STRA1.010e-9369.43Superoxide dismutase n=1 Tax=Tribonema minus TaxID... [more]
A0A2T6E734_9GAMM2.630e-9267.69Superoxide dismutase n=4 Tax=Saccharospirillum Tax... [more]
W7T7U7_9STRA5.830e-9266.33Superoxide dismutase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A2T4D4F0_9GAMM8.690e-9167.01Superoxide dismutase n=2 Tax=Pseudidiomarina aestu... [more]
A0A7C5EH16_9BACT2.220e-9068.75Superoxide dismutase n=1 Tax=Planctomycetes bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1401736..1411203 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LI17
Preferred nameSODB1
PFAMsSod_Fe_C,Sod_Fe_N
Model size1514
Max annot lvl2759|Eukaryota
KEGG koko:K04564
KEGG Pathwayko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016
Hectar predicted targeting categoryother localisation
Exons8
Evalue1.48e-139
EggNOG OGsCOG0605@1|root,KOG0876@2759|Eukaryota
Ec32 ortholog descriptionManganese/iron superoxide dismutase, N-terminal
Ec32 orthologEc-04_002870.1
EC1.15.1.1
Descriptionoxidoreductase activity, acting on superoxide radicals as acceptor
Cds size591
COG categoryP
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.299.1prot_P-littoralis_Contig1.299.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1 1402554..1410909 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789320.2013123-UTR-P-littoralis_Contig1:1401735..14025531680789320.2013123-UTR-P-littoralis_Contig1:1401735..1402553Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1401736..1402553 -
1680789320.2798276-UTR-P-littoralis_Contig1:1410909..14109351680789320.2798276-UTR-P-littoralis_Contig1:1410909..1410935Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1410910..1410935 -
1680789320.2878988-UTR-P-littoralis_Contig1:1411124..14112031680789320.2878988-UTR-P-littoralis_Contig1:1411124..1411203Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1411125..1411203 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789320.2159517-CDS-P-littoralis_Contig1:1402553..14026121680789320.2159517-CDS-P-littoralis_Contig1:1402553..1402612Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1402554..1402612 -
1680789320.2246666-CDS-P-littoralis_Contig1:1403220..14032751680789320.2246666-CDS-P-littoralis_Contig1:1403220..1403275Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1403221..1403275 -
1680789320.2330792-CDS-P-littoralis_Contig1:1403582..14036511680789320.2330792-CDS-P-littoralis_Contig1:1403582..1403651Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1403583..1403651 -
1680789320.241697-CDS-P-littoralis_Contig1:1404296..14044911680789320.241697-CDS-P-littoralis_Contig1:1404296..1404491Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1404297..1404491 -
1680789320.2546387-CDS-P-littoralis_Contig1:1404666..14047761680789320.2546387-CDS-P-littoralis_Contig1:1404666..1404776Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1404667..1404776 -
1680789320.263534-CDS-P-littoralis_Contig1:1405630..14056671680789320.263534-CDS-P-littoralis_Contig1:1405630..1405667Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1405631..1405667 -
1680789320.2718377-CDS-P-littoralis_Contig1:1410843..14109091680789320.2718377-CDS-P-littoralis_Contig1:1410843..1410909Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1410844..1410909 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1.299.1

>prot_P-littoralis_Contig1.299.1 ID=prot_P-littoralis_Contig1.299.1|Name=mRNA_P-littoralis_Contig1.299.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=197bp
MAIVLPELPWAKDALAPHISAETIEYHYGKHHAAYVTKLNAAIASNSELE
GKSLDDIMKTSTGGVFNNAAQVWNHSFYWKSLSPSGGGEPTGAVKEAIEK
KFGSFDEFKKAFSDTAAGHFGSGWAWLVKNESGEVEVVGTHDASNPVKEG
KGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFANENFAKC*
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mRNA from alignment at P-littoralis_Contig1:1401736..1411203-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1.299.1 ID=mRNA_P-littoralis_Contig1.299.1|Name=mRNA_P-littoralis_Contig1.299.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9468bp|location=Sequence derived from alignment at P-littoralis_Contig1:1401736..1411203- (Pylaiella littoralis U1_48)
TCTTCGCCGCGCGCCGATTGTCACATCACGAGCTCTCGCTGCTTTTCCTT
CTTCTCTACCCTTTCCGCACTTCCAGAAAGTGAGTGATTGCATTAATTAT
CCTGTGCACGAGATCGGTTTGCCACGTGATAGATGCACGTCACTGGATTG
ACCCATGCCGCTTGGACGTCGCATATACATGTAATTGAGCGAACCTTCTG
ACCTTGGCAATTACGATGTGCTTGAAGCCTTCCCACGCTTTCATGTTTGT
TCGCTGTTTGTTCCTCAGAGCATCGGTCGTCAAATTCATCGATCATGGCC
ATCGTGCTTCCGGAACTCCCATGGGCGAAGGACGCCCTAGCTCCTCACAT
CAGCGCCGAAGTAAGGCACGCAGCGGCGGCAGCAGCAGCAGCAGTAGAGC
AATCCGCACAAGAGAAAAGTCTAGTACTATATGATACTGATTTCCAGCTG
ATTTCCCCCCGTCACACATCAATAATCCATCTGAACCCAAAATTGAAACA
CCCCGCTTTCATTCCATCAGTCACATCCTCTTTTTGTGCACAGAGGGCAC
TAGACTCAGGCCAGCCAGTTTGGTCCGGTTTGGCACATGACCCAACAGCT
TTTTGTTATGCGCTGGATGCAATCGCTGGCGCGTGACGTGGTACGCTCAG
GAGTCGCCTTCAACTTTGAAACAACCCAAACCCCACAACAGCAGTCACCA
CAGACAGATGTGACCGCGCCTTTCCTTTTTATTTGAAGTCTCCCCGCCGC
CTTATGATTATCAGTGATCGCCGTTACCGCGAATTCACCTGTTTCTTTCC
GGTTTTTACCACAAGTCAGCTTTCCGTGTTACTTTCCGGCAATTACCGCA
AAAAGCGGGGATAGATATGTACTAGAACTGGTGAAAGTAAGGCCCAATCT
TATGGGAGATGGGCAACTGGAATTTCCGGAGCTGGAAAAGCGTTTTCCAA
GCCTGATATTCCAAGTCGGACAATCAGACTGGTGCCAACTTTATGGGAGA
ATCGGAGAATCTGGACAGCGATTGGAAATCAGATGGGGTTGCCGAATGGA
CGGCAGGCGGTTTGGGCTAATTTTGATAAACTGCTGCTGATGGCGCAGAG
CGCCAAGCGTAATCGCCAGCACGGTCAGGATCGCTCGTAGCTTTGGTACC
TGCACCTGGCCCGTGTGGTTGTGTTATCGGTTGCGTGTATTTGTGCTTGT
TGTGTGCTGTGAACCACTGCGGAGTAACCTCGTGACTGCGCGCGCGACGG
ATCCCAGCTTGGAATCCGAGGTCATTTGGCCTGGAATCCGAGGGCAGATT
CTAGCCGAGTCGCTTGGAATCCGGAGAAATGGAAAATATTTTCCAATTCC
GACCGAAAACAACCCCAATAAGATAGAAATATTTTCCAGGCCTGGAATTT
GGATTCCAGTTCCTCATGTGAAACTCTTGGATTCCAGTTTTCGGCTTTTT
ACCATAAGGGCTTGTTTTAACGGAAAAAGTGACACCCGGATTGGAAAGCT
AGTTGGAATTGGAATTGGCTCTGATTGGTCAGTCAACTTTTGCATTCTAC
GGGGCTAGCTTTTTCGAATAGTTGGAATGGGCAAGGGAGTTGGTGCGAGA
ACCGAAAGGCGGTGTATGAAATGGCAACAAGTTTCGTGTACAGCAGTACA
GCACAGCAGTAGTAGTGTTTTCCACCAAAGAGACCGACAAAAACACGCAC
GAAGCTAGCAGACAGCAGCTGTGCTGCTGCAGCTGGCAGGCCTGCGGGGA
GCAGTCACACACACACCCACACCCACACCTACAATACACACACACGCGCG
TACATATGATATGATACACACACAACTCTGGTAGGTGCCGAGATGGCTGC
GACATGGATCATGAACTATAGCCAGCTGGTAGCAGATAGTGCCCTGCCTC
CTGAGCATGGCTCCTACCGCCGCTTGTCGGCGGACGCTAGGTAGTCTAAT
ACTTGCGCATGAATGCGCGTTCTACAGGTGGCAAGTACAACAGTTGGTAC
GTTGTGTAGTCGGCGCTGGCGTTGTCAACCGCAGTTGCTTCGATAGGTTT
ACATGTATGTCGCATCTTCGGAACGCAGATCAGCTACAACTGCTCCACCT
AACCCGGGTGTCACATGTTTCGTTGAAACGACATGTGTCTTCTTTCCATA
AAAGCTATAAGGTCTGTCCAAATTGGGCCTCCAATCCGGGTGTCACATTT
TGCGTTAAAACAGGCCTTAAGAGCGGGCCTAATAGCTTTTTTTCAACACC
CCCCGCCAAAAAAGTACCTGCAGTAGGCTGTGTTCAACACACGGAAGATA
TGGAGGAGATCGCCATGATCAAGAAAAAAAACGAAAACAAATCTTCTGCG
GATGAGTAAAAAATATCGAGAGAGAAAAGACTCTTGTGACTAAGTCTTCA
ACTTTGCGGCACCGTCTTACCGCCGCCCTCTAGTACGCAGCGTGGTGTGT
GTGTGTCACTGCTGCAGCGCAACAACAGGTACAGCTGTGTGCTGGACTGC
AGCTTCCGCAGCAGGAGTGTACCAAGTACTGCTGCTACACTGTTGGTGCT
GTGCGGTGTTGTTCTGCCTGCCTTGTGCACAGCAGCAGCAGCAGCAAAAG
TCATGTTCACACTTACGAGACAGCGGCAGCAGCACCCTATCTCCCTCCCT
GCCTCTCTCTCCCTCTCGTTCCCTCTCTCTCCTATCCATACACCAGTATA
CCAGCAGTACAGCAGTAGCTAAGTGGCTGTTGTGTGAGATGTGTGTGATG
ATGTGCTCTCTTCAGAGTACCTGACATGCATGCCTCCCTTCATGTATCCG
GGAAAAGGGCGAATTTTGGCGAAGAAATAAACACACATCACCGCTGCTAT
CTCGATGGTCGCGACACGAGATGAGCAGGAAGCAGTTGGGAGAGCTCGGA
CTAAATTAGCTCTGTCGGCCACACCCGAGGATTCGTGAAGCCGTTCTGTG
TGTGTGTCGTTTTCAACAAAAAGGTGGCCGAAAAAACTCCCTCAGACGGA
CGGACGGACAGCCTCGGCATAAATTCACGCCCCCTGACTCTTTTTTTTTT
GCGTGTGTGATCGTGATGTGGGCACGAGGCTTGGGGGGGGGTACCTAAAC
AGCTTCTTTTTTTTTTATCAAAAAGCTCACTAACGTTTGCAACGAAAAGC
TAATATCATCCCCGGGGGGTTCGCAGGATATTTCATCGAACGGTACCCGG
GGGTTCCGCAGACCCCCTGCATCGTAAATGCGATGGAACACTTGCGTCGG
TCCTTGTTCTTGTGTCGTGAGGGCCCGGATTAACGGGGAATTGAAAAAAT
GAAATTGCGAAAAAGAAATCGGAATTGGGCTCTGATTGGTCCGAGAAAAA
AAGAGGAAGAGGCGTCATTTTCTTTGAAAGAGGCGTGTCTCCGATTCAGC
ACACACCGAGCAGGCGTTATTTCGTTTTCTTCTTCGCGAAAATAAAGTGT
TTCGGACCTTTTTTTTGCGAAAACGAAAACGAAATACCGCCTCCTAGCCT
TGAAGGCGGGGACGCTTCAGCTCTGCGAGGCATCTCCGGTAGACTTTTGT
ACAGCAGACAAGTTCACATGTTGGCTGATAACTTGCGACACAAGCGACGA
AATTCCCTGCTATTTGCATGTCTAGAGAGGTGGGTTTGAAGCGAAATGGG
AATGCCCAAGGTTTGGGGCAGTGGGGTGTCAAGCGTGACGCGAAAAAAAA
ATTCAACTCGTGCACAACGACCCGCTTTTGCTTTGAGCCGCTTTTTCGGG
TGAGTTTGCAAGCAGCCAAGTTCACGTTTCCACTGATATCTCGCCGGAAA
ACGGATGAAATTCCCTACCATCTGCGTGCCTAGCGAGATGGGTCTAATGT
CCACCGGGAACACCCAAGGTTTGGGGTCGGTGAGTATCGAACGTGACGGG
AAACAAGCGATCAGCCATCCAAGAAACATCAAAAGTCATCGCAAACGGTG
TCCTCTGGTGTACTGCTGTATCCCCTCTTCTTCTCCACCCTGGTACCAGG
TCCGCTGCAGCAGCGTGAAAAAAAAAAAGATGCTCGTTCCGTTGATACTC
AACTATTTTTTTCTATTCACAGAAGAACGAATTTGTTTCTTTTTCGCAAT
TTCGCAATTTCGTTTTTTTCAATCCCCCGTTAATACGGGCTCTGATGTCG
GCGAACGCAAGAAGCTGTGGTCGACCCTCTTGGGGTTCCGCGCTAGTTGA
AGACCTCAAAGCTCCCCAATCGGAGGATCCTCCACCACTCATGGTCCGCA
ATCGACTAGTTGTGTGTTGTGTGCTGTAGTGCTCTCGTGCTATTGTTGTG
GTGAGGGTCTATATTTCGTGGTGGTACGGTCCGTCTGCTGTGTGTGGCGG
TACGGTAATGCAGGGAGGACCGTGGATGTCAGAGGGGGCCCCGCGCAGCA
GAGGGGGGGGGCGCTCACAGCAACCGTGTTACCGCAAAATAACCGTGTTA
CTTTCCTCTGAAAAAGTTACCGGTAATCACCGGTGTAGCGGTAACGGCGA
TCCCTGATGATTTTGTGTACACAAGTATCGTATGGGGCTACTCCGCATCA
TACTCGCAGGTAATCAGCAATACCTACGGTACCCATCGTGTGTATCCCGC
TGGTCCAAAGGACAGCATGCATCCACTCCTGCCTGCCTCGCGGATTGTAC
CGCCTGTCCGGGACGACACAAGAGTAACTTATTTGCAATCTGTTCTTCGG
TCTCCTACAGTATGTACTTGCGAGATATATATATATATGATGGTATACCT
CTCGCGCCAGGATCCTTCCGCATACAGACAGCTGTTCAGCAGCACACAGT
AGTATATGCTGGTATACTGACTGAGCACTACTGCTGTTGCTTCGTAAAAT
GTAATTTCAACTTGTTTATCTTTCTACGAGCAAGTGCCCCGCCCTGCCCC
TTTTCACGCCTTTGGGAGTGGGGGGAAGCATGACAGCATGGTTGAGCTTT
TATCGCGAGAAAGGGGAGAGCAATCCCTTTCCCTCGTCGATGGTACGATC
GAACGTTGTTTACTCACGAATTAATCGATTTCCACTTTCACGCGCATTGT
GAGATGTAAACCCGGATCGTGTTACTGCACTGGGATTCGAACTCACGCGT
GAACTAAGAAGAATATTTGTGTCAAATGTTTACAGCACCTGGTACATGGT
GGGTATGCTACTATCACGGAGCCCCGAGATACCGAGACGATGATCCCCCC
CTCCTCGCGCGGGGGCTACAAAAATGATTGTTCAGGGAGTAAACTGGCTC
TTCGCCTCCGTAGCCACCTACCCGTGAAAACCTACGATATTTGTTGAAAG
ATTTTAAAAAGTGTCTTCCTCACTTTTCCCCATCATACTCGTATACACAT
CATGGTACTTCGTCATCAAACAATGAAATCGAGATTATTTCTCACTCACA
CGAACAACGCACACCTTCGCCGTCGCGTGCCACATGTCTGTCGCTGCTGT
GCGTCTGCTGCCCGCGCCCGCTTCCCGACCCCGCATGTGATGCTGGCGTC
GTCCGCCCTTCCTCCTTTCTTTTCTTCCCCTCGCAGACCATCGAGTACCA
CTACGGGAAGCACCATGCTGCTTGTGAGTTTGATTCGTACGAAGTACTTC
GCGACATTCTTGTCAGGTTGATCCTGATAATCTTATGAGAGCTGCAACGG
CACATTGTACATACTGTACGATATATGGTGACTCAGTGAACACGCATCAC
GAAATGTCATAGATTAGTACTCCGGTGTAACTTTTTTTGTGTCCGTCCCT
GTTTTACTATAGATCCTTGTCGAGAGAGATACGAATACGCGTACTTCTGT
CTTCGCAAGGAGCATAAACGTAAACATTTCACCTGGCGATGGGCGACGGC
TGGCCGCATTTTTATAAGCTCTCCCGCGAAAAGGAGAACCAGATTAAATC
ACCGCCCAGCCCGATGGCGGGCGAACGCACGGCGAGGGTTCGCTCACCAT
AAATAAGGTCGACCGGTTTCATCTGTGTCTCTACTCAAGCGCGAGTACCT
TTCAAAATCTTGCCAGCCGTCACGACTCGATGTCGGACGCCGATCTGTAG
GAAGCAGGCCAGATATCGTATCAATTACCATAATTATTTTTGTGCACAGC
GGTTCAATCCGCGGGCGTGCGGCGTGTCGAGCGCTCGAACAGATGACCAT
CCGATTTCGCCGGGGCTACAAAAATGGAATAGGCGGAGAATCGGTCATTC
CAGGCGACGGCTCTACAGCGTTCAGATGCACCAACGGGTTCGAAGAAACA
ATGTGTTTGTGCTGTAGTAACAGCAACAACACACCATGACATCATTTTTT
TCTCTCAAGCGCAGCCGCCATTCATTTTCAAGTACGAGTACAGATGCTTC
TGCTACATTTTGTGTTTTGTGCGGTGTCTTGTGTGTCCTTCCTCTTACTC
CTCCCCTCCTCCACCTCCTCCTCTCAGATGTGACGAAGCTCAACGCGGCC
ATCGCCAGCAACTCCGAGCTTGAGGGCAAGAGCCTCGACGACATCATGAA
GACCTCCACGGGTGGTGTCTTCAACAACGCCGCCCAGGTGACTTTGCCGC
TCCGGTGTGATGGACTAGCAAAGAGAATAGCTACATACATACCTTTAAAT
TCTGAAAAAGCACGCCTATAGGGCCGTGTTGGTACCCGTATTCTAAAGCT
GGTTGTCCACCAACCCCCCAATATACGTGTAAATCACTCTGAGACACTTT
TTTTTTTTACAGGTGTGGAACCACTCCTTCTACTGGAAGTCTCTCAGCCC
CAGCGGGGGCGGAGAGCCAACCGGCGCGGTGAAGGAGGCGATCGAGAAGA
AGTTCGGGTCTTTCGACGAGTTCAAGAAGGCCTTCAGCGACACCGCGGCC
GGCCACTTCGGGTCCGGATGGGCGTGGCTCGTCAAGAACGAATCCGGAGA
AGTCGAGGTACCCACATTGTTTTCATCATTTTTATTTTTTATTTTTTTCG
TCTGTGAGATGGTGATGATGAACTTTTTTGATACAAGAACGATATATTGT
TTTGTTTTTCCATCTCTCGAAAAATGTGTCGATCGGGGAGGGGTTCACGT
CAGTCCGGCAGGGGAGGGGGGGACTCCATTGATGCTTGCGGTTGTCATTT
GACCGTTGACCGCGCGTGTGACTCTAGCCTTGCCTTCGAAGAGTCATCTG
ACCATTGAAGACGCATCCCTTCAGAGCGTGAGCTTACGTGCATGTCAACA
TTCCCCGAGTCCAGCAAGTCCAGGAGGGTACCAAAATACGTTTCCTGGTC
TCTCGTTTTTTTCCCCCCCAACGTTCGACGTGTCTGTTTTTTGTTTGTCC
TGGGACGCGCGAGCCTAGAGGTAGGCGTCACTGGTGCGAGCCATCCGCCT
CGACTGCACGCTCCGAACCGCACCCTGAAACAAGAGGGTGCTGTACTCCT
TGAACTCTTTTTACTTCCGCAGCGTTATCAGAGATTTATCATGGGGGTTT
TGGCCGCGAAACCAGCATGATGGTCGCCTCCCCTCCTTCGCTAAACCTCG
TTGCTGTTGCCGATGTTGCGCGTTTCTTTGTTGTGTTTGAACGGCCGCCC
AGGTGGTTGGAACCCACGACGCGTCCAACCCTGTGAAGGAGGGCAAGGGA
ACGCCCATCCTGACCTGCGATGTGAGTAGTGGATCGATTGTCGATAAGGC
GCCTTGCAGGAGTTATCTTTCGAATCGCTCGATTTGATGCGGAAATTCGT
TCCTGGTACACTCGATTTCCAGGTCCATCAGTAGCCCCCCCCCCCCCAGC
ATGTTTGCTGTCGCACACGATTCAAAGTACCTGGTGAATGGATTACGTGC
ACAGGTCCCATCACCAATCCCGCATCTTCCTCCCGGAATCAACCCTCGCC
TCCCCCCCCTCTAACGTCCTTACCCTTTCCCTGGCATTCTGATCTGTTTG
TGTCGTCCTTCTCTCCCTCTCTTTCAAGGTGTGGGAGCACGCGTACTACA
TCGACTACCGCAACTCCCGGCCAGGGTACATCGGTAAGATTGCCCCCACC
TGAGCACGACGCTCTGTAGACATATATACGATCTTTGACCACCCGTGTGT
GCGTCTGTCTACACTGCGTTACACCGAGTTCCGATCATTTCGTGCATTCC
GTGGTGTAGAACCCCAGTCCATCCGGGGTTGATGATTTTTATTTCGCGCA
CGTCTGAGGTCGCCAGGGGAAGCTCTGTGTTTTACGGCGACGGGTAATCC
ATAGGTTCCTTTGTAGGTGGCAACAGTCCACCCTCTGTATACACGATGCA
TTCGAAGCTGGCATCCGCATACATCCGTTGAGTTTATTAAAGTACCGGAG
TCCGCCTCCATCTCGATCGGGTCGTGGGGGGTCACCTTAGCTCACCCGTC
ATGGGAAACAGGATGCAGGGAAACACATGACTGAGGAGCACCGTTCCAAC
CCATCATCAAGATAAGACGTGCGACAAGTTCTCGTGTACTTGGAAACATT
GTACAAGTGGTGACTCTATTTGGAGCATCAGGATCGGTGCTCCGTTTCGG
AAAGGGTGTGTGGTCAAGTTTAAGCACAGGCGGCATTAAATACCCCCCCC
CCCCCCTCCCCTACCGCATCTCGATGATTCCGAACTCCCAGCGGCTTGGT
GGAACCTTGTGAACTGGGACTTTGCCAACGAGAACTTCGCCAAGTGCTGA
TCGGTTTGGTTTAAGTCAGCGGAGATGGACGGACGCACGACGATAGATAT
AAGGAAAATAAAGCATTTCACGAACTACTGAACAATCAACAATCATTAGA
GGCTTGCCCAGACGGAAACGCCAGCGCTCCAACTCTGAAGCCGTAGGTAG
TCATCACACCTTCTCAACGGAAGGAGCTGCCACTGAGGAGACCGGGCGCA
AGAAACGAACGACGATCGACATCGGAAGAGAGAGGCGTTAAGATGGCGAA
AGTACGGGTGTCTTGTGTTGCGCAAGTGGGTCGATTTGCGCGCGCCTTCT
CGCAGCGAGTGTCTTGACCACGGGATATTAGATAAAAAGAATCAGAGTTG
AAAAAATAAAATAGAACGAGTTGGGGTGTGACGTGCGTGCCTCAATGCCG
CCCCTGGGCTGTTGATAGATGTTATATTTGTTCCGAAAGCTCCTCCTACG
ATCACAAGCATGTACGAGATCTGGAGGTGGAAATACTATTACTCCACACG
GGCAAATAAAATACAAAAAACTTGCTGCGTAGCTCGCAATAACTTCTTCG
TGACTTAAATGCAAAGAAGGTCCGCGCAGTGACCCAGAGTAGACTGTTAC
CAGTGCTCTGGGTGCTCATCGTCCGAGTTCCATGAGGCCGTTGGGGGGGA
AGAGGCATACGGACGGGAAATCTAGGTGGACGCATGCGTCAGACTCGCCG
CGTCTTGAAAGCCAATCGTGACACCCCATGCACCGCGCTCATTCCGTACT
CCGCATCCCCCCAGGGTGTCTGGAGTTTTCTTCGCGATTTTGTTTTTTCT
ACAGAAAAACACGTTTCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1:1401736..1411203-

>mRNA_P-littoralis_Contig1.299.1 ID=mRNA_P-littoralis_Contig1.299.1|Name=mRNA_P-littoralis_Contig1.299.1|organism=Pylaiella littoralis U1_48|type=CDS|length=591bp|location=Sequence derived from alignment at P-littoralis_Contig1:1401736..1411203- (Pylaiella littoralis U1_48)
ATGGCCATCGTGCTTCCGGAACTCCCATGGGCGAAGGACGCCCTAGCTCC
TCACATCAGCGCCGAAACCATCGAGTACCACTACGGGAAGCACCATGCTG
CTTATGTGACGAAGCTCAACGCGGCCATCGCCAGCAACTCCGAGCTTGAG
GGCAAGAGCCTCGACGACATCATGAAGACCTCCACGGGTGGTGTCTTCAA
CAACGCCGCCCAGGTGTGGAACCACTCCTTCTACTGGAAGTCTCTCAGCC
CCAGCGGGGGCGGAGAGCCAACCGGCGCGGTGAAGGAGGCGATCGAGAAG
AAGTTCGGGTCTTTCGACGAGTTCAAGAAGGCCTTCAGCGACACCGCGGC
CGGCCACTTCGGGTCCGGATGGGCGTGGCTCGTCAAGAACGAATCCGGAG
AAGTCGAGGTGGTTGGAACCCACGACGCGTCCAACCCTGTGAAGGAGGGC
AAGGGAACGCCCATCCTGACCTGCGATGTGTGGGAGCACGCGTACTACAT
CGACTACCGCAACTCCCGGCCAGGGTACATCGCGGCTTGGTGGAACCTTG
TGAACTGGGACTTTGCCAACGAGAACTTCGCCAAGTGCTGA
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