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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 1036 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 1035 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789414.38847-CDS-P-littoralis_Contig109:219682..220301 | 1680789414.38847-CDS-P-littoralis_Contig109:219682..220301 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig109 219683..220301 - |
| 1680789414.3970442-CDS-P-littoralis_Contig109:220315..220434 | 1680789414.3970442-CDS-P-littoralis_Contig109:220315..220434 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig109 220316..220434 - |
| 1680789414.4055476-CDS-P-littoralis_Contig109:223549..223813 | 1680789414.4055476-CDS-P-littoralis_Contig109:223549..223813 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig109 223550..223813 - |
| 1680789414.4147253-CDS-P-littoralis_Contig109:223939..223972 | 1680789414.4147253-CDS-P-littoralis_Contig109:223939..223972 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig109 223940..223972 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig109.41.1 >prot_P-littoralis_Contig109.41.1 ID=prot_P-littoralis_Contig109.41.1|Name=mRNA_P-littoralis_Contig109.41.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp
GDTRAASPASQQRQPTHKRPPTSTPTARTGKILLLGHSVAFPVSRLLLSS
PSVLLVSCPVSNTYEERAGRAGSEWTTIVWNPEKQQQQRGLRQQHRQRAV
LSRFRPSFETSARDTKSTNDKARPRAGATRTRTSARLARLLDAGEQLQPT
SSAPPPPPPPPPGAPGAPLKASVPERPNTEEGQGSRTIAGAAARAGAVTA
TAAAAEASASAEPEITTGTVKAITAVTTAIAPGTEARANPERAAAVAGPA
VTVVRPPFSSATGTGNAAAAAAAAAADNSGSSSGDSRAAGAPPALTSGGA
KRKLGPERTREGRSESPQKFALSGNNVGGGGGGSGGAVGKRLSGE back to topmRNA from alignment at P-littoralis_Contig109:219683..223972- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig109.41.1 ID=mRNA_P-littoralis_Contig109.41.1|Name=mRNA_P-littoralis_Contig109.41.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4290bp|location=Sequence derived from alignment at P-littoralis_Contig109:219683..223972- (Pylaiella littoralis U1_48)
GGAGATACGAGGGCCGCAAGTCCAGCGAGTCAAGTGCGTCCGTTTGCATT
TTGTCCAGGATACATTCACACAGGCATTTTCATTTCGAACCGAACTTTGC
TGCTCCGCCTCGTTTTTCTGACTGAGCTGTTCTCTCTACCCGCCCGTTGG
CAACCACAGCAGCGGCAGCCGACGCACAAACGGCCGCCGACCTCGACACC
GACAGCACGGACAGGAAAGATCTTGCTCTTGGGGCACAGCGTGGCCTTTC
CAGTCTCTCGACTGCTGTTGTCAAGCCCAAGCGTGCTGTTGGTGTCGTGT
CCCGTCTCCAACACGTACGAAGAGAGGGCCGGGCGTGCCGGATCGGAATG
GACGACGATAGTCTGGAACCCAGAGAAGCAACAACAGCAGCGGGGGTTGC
GCCAACAACACCGGCAGCGAGCGGTGAGAGAGGAGAGAGAGAGATAGAGA
GAGAGGACAAGGAAGAGAGAGAGGTATCGGGGTCCTATTTCCCGAGTAGG
ACAGCATGTTCTATTCCGAGCAACTCACAAGTTTCCACAAGTTTCCTCCT
CCGCTTGCTTGCTGCTCCAGGTTATACGGAGTATAATCGCTGCCGGAATG
TGTCTTTTCCCTGCTGGTTAAATCATCGTACCTGGTGACCTACCTCCGTT
ATAAACTTGGGCACGTATAATATACATACAACAGCAGCGACGGGACCGTG
CGCCTGGCGCCAAACAAACGTGCTCGCACCGACTGCCAACATGAGGGCTC
TTGTCTATCTAACAACCACAACCGATGCAAACACCACCACCAGCTACTAC
GAGTATCTGCAGCAGCGGCGACCTTGCTTCCCCCGTAGCGACTTTTCTTC
CTCCTGGGGGTCGGTTCCCCAAGGTACATATGATACATACTCACTGACAC
AAATACAAAGTATGATATCTCACAGCAGTTGTCACTGCTGTACTGCCATC
CGCAGTTCTCGGTGTCGCCGTTGTCGGTGCACGTGGAAAGCCCTTCGGAG
CAAAGACAACCACGTACACGCCAACACAGCACCACAGCACATGCTTGACA
GCAGTACCGACCGAGCGAAGGGTACGACCAACAGCACCAGGAAGAGGACG
GGGGCAGCAAGGAAAGCTTACCGCCCAACTGCTGTCTGTCGGCGTGGCTG
CTCCGTGCTCCGTTTCTCATCCCCCTCTGAGAGGGTCCGCGTCCCTACAA
GAGTGATTCAAGTTTTAGTCCAGCAGCAGGCACTATGATACCAGTACGTA
GTATACTTCGAAGTATATAACAGCAGTGTGTGTGTTGTGTCTTGGACGCC
ACTCTACACCTTTCAGGTAGGTAGACGCTCCAACCGGGGTCACTCAGCAT
TTAGGAATTCAGCGTGTGTGTGTTGTCATCCCTTTAATTGGACGCCACTC
TGCACCTTTCGGGTAGGTCGACGCTCCTTCCGGGGGCACACAGGGGGAAG
TCAACACAGTTTTTTTTGTTTTTCTCCACTTCCCTCTGCGGTGCTTGCCT
TGTTTTTGGTTGAGCTTTTATCGCGAGAAAGGGGGCAGCGATCCCTTTCC
CTCGTTGATGGTACGATCGAATTTTTGTTTGCTCACGCTTTCCACTTCCA
CGCGCATTGTGAGAAGAAAACCCAGATCGTGTTGTTGCACTGGGATTCGG
ACTCACGCGTGAATGTCAGAAGGTTGTGGATTACCAACTGAACCACCGGG
GCGACCGGTCAGTAGACTCTGAAAAAAACGGCCTTATTTGTGTGATCCTT
CTTGGACGGGTGGAATAATATCACAATCCGGTACAGTACTACTGCTGCTG
GTCAGGCTGGCTCACGGTGAAGACCCCAAATTCAGCCAACAGACTGCTGT
CGTCCCGTGCGCAATAAATACTCGATGATGACAAATTTGGTACCAAACTG
ATTGCCGTCCGTAGCAGAAGGACAGAGGAACACGACGTGCTGGGTTTTCG
CTCAAAGCTCTATGAAAGAGTCAGTACAGCAGTAGCGGTTGCTCTATGAT
AATGGATGACATGTGTTCCGGTCATTACATTACGTTTTTTAACACCCCCT
GAATTAGATACAAACGAGGCTTTCCACTCTAAAAAGCTCAAGAAATGAAA
TCTACAAGCAAAAGCATGATTCAAAAGATACAGCAGCATATACTTGGAAG
TACTTTTTTCGGACGCGGGCGGTCTCTCTGGGTCCCAAAGGAAGGTGTTG
ACAATTTTTTTCCCGAAATCCCACAAACGGACGTAAGCACACCCGCTTTC
GAAAGTTTAAGTTTCGAAGTGCAGTCAGTAGGCCATACTAGCACTGCTTG
CAGAAATTAAAAAATTCTGGATTCTGTTGTGTTATGATAGGATTTTGTAT
GTGTACTGCTCGTGTGTACTTCGTGCCTCGGAAAAAAACGCGTGAGAAAA
TAGTTTTTGAGACTATGCGACAAGTACTTTTCTATCGCCCTGAACCATCC
TGTATCTTTTGGTTTACTTCGAAGTATATTTTTTTGTGATCGTACAGCCC
GAAACAAGGGCAAACCAACCCCACCGCGCAGCCCGTTCTTTGCAGCATCG
CAGCGCAAGTCTGCCGCGCACACTTTTGACTTGATGGCCGGCAGCACTTC
GTCGTTTCGGTCCCCCACAGAGCCCACATACACTGCTGTACAGACAGCAG
TACTACGTTCGGCGGTTCTTCCCGAATTACTCCATGCGCCCCGGAGAATC
CTTCCAGTGTATCCGCACGGCGCGTTGCCGCAGGCGAAACACCCAGTGAC
AACCGCGACTTCACTGTCAGTTTAATATAGACTCCGACTGTCAACAAAAC
GCATCGTTGCATCATTAACCCCCCCACAAGCTCAGGCAGCACCAGCTTGT
GGAATGGAAGGTTAAGGTTCCGCTTCGCCAACAAAGACATTCCCTTCCCA
CTCCCGAATACCCCGGAATACCCCGGAATAAGTAAAAGTTCGATCCCTAC
CGCGTCAAAGAAAAGAAAAAGTACGCACGTGTATCCAGTGGTGTCCAGCT
CCATCACATCTGATCATGCTCAGAAGTATAATACACCTTAGTGTTGCCAG
GCATGCAACAGCAGCAGTACCCCTTAACACCGACAGCATAAAAACGGACC
ACTGCATGTCTCCGAGCACTCAGAACCGAATCTGTTACGCTTGTATTTTT
TCTCTCTTCACCTTCTTCCGCCGTCCCTGAGAGTTATTTTCCGCGCGATT
TACAGAGGACTTGTACCCGTGTCATATTATACATACTTGTACTTGCAACC
GAAGAAGTTGCTTTACGTTCGTTCGATTTGCGTTGTTTGTTCTGTCTGTT
TGTTTGTTTAACAAAACACCCAAAAAGAACTCGCTCGCTGAAACTCGCTG
AACGAAACAAAACCTGCCGACACACGAATTTGTAGCTGAAGTATGATATG
ATAGCGTGTCCGTTAATCGATTGCTGTAGGGGCAATCATACTGACGTGCC
CGTCTCCACTTCGCAAGGCTAATTATTAACCAACCGCGACGATAACAACA
ACATCATCAATGTGATATCACACCATGATAACAAGCAGGTCCTGTCGAGA
TTCCGCCCGAGTTTCGAGACCAGTGCGCGAGACACAAAGAGTACAAACGA
CAAGGCCCGCCCTCGGGCAGGCGCTACACGGACGCGGACATCGGCGAGAC
TCGCACGGCCCTTTCTTCAAGGCTTCTCGACGCCGGCGAACAATTGCAGC
CGACGTCGTCGGCACCGCCGCCACCGCCACCGCCGCCCCCGGGCGCCCCG
GGCGCCCCCTTGAAGGCAAGCGTCCCGGAGCGGCCGAACACCGAGGAAGG
GCAAGGAAGCAGGACAATTGCAGGAGCAGCAGCACGGGCGGGAGCAGTGA
CAGCAACGGCGGCGGCGGCAGAGGCATCGGCATCGGCAGAGCCAGAAATA
ACAACGGGCACGGTAAAAGCAATAACAGCAGTAACCACAGCAATAGCCCC
GGGGACAGAGGCTAGAGCGAACCCTGAGAGAGCAGCAGCAGTGGCCGGAC
CGGCGGTGACAGTAGTTAGACCCCCTTTTTCTTCTGCCACCGGCACGGGA
AACGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGACAACAGTGGCAGCAG
TAGTGGTGATAGTCGAGCGGCAGGAGCCCCCCCGGCTCTTACCAGCGGCG
GGGCCAAGCGAAAGTTGGGACCGGAGAGAACACGAGAGGGGAGGAGCGAG
TCGCCTCAAAAGTTTGCGTTAAGCGGCAACAACGTCGGCGGCGGCGGCGG
CGGCAGCGGCGGCGCTGTCGGCAAGAGACTGTCAGGCGAG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig109:219683..223972- >mRNA_P-littoralis_Contig109.41.1 ID=mRNA_P-littoralis_Contig109.41.1|Name=mRNA_P-littoralis_Contig109.41.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig109:219683..223972- (Pylaiella littoralis U1_48)
GGAGATACGAGGGCCGCAAGTCCAGCGAGTCAACAGCGGCAGCCGACGCA
CAAACGGCCGCCGACCTCGACACCGACAGCACGGACAGGAAAGATCTTGC
TCTTGGGGCACAGCGTGGCCTTTCCAGTCTCTCGACTGCTGTTGTCAAGC
CCAAGCGTGCTGTTGGTGTCGTGTCCCGTCTCCAACACGTACGAAGAGAG
GGCCGGGCGTGCCGGATCGGAATGGACGACGATAGTCTGGAACCCAGAGA
AGCAACAACAGCAGCGGGGGTTGCGCCAACAACACCGGCAGCGAGCGGTC
CTGTCGAGATTCCGCCCGAGTTTCGAGACCAGTGCGCGAGACACAAAGAG
TACAAACGACAAGGCCCGCCCTCGGGCAGGCGCTACACGGACGCGGACAT
CGGCGAGACTCGCACGGCTTCTCGACGCCGGCGAACAATTGCAGCCGACG
TCGTCGGCACCGCCGCCACCGCCACCGCCGCCCCCGGGCGCCCCGGGCGC
CCCCTTGAAGGCAAGCGTCCCGGAGCGGCCGAACACCGAGGAAGGGCAAG
GAAGCAGGACAATTGCAGGAGCAGCAGCACGGGCGGGAGCAGTGACAGCA
ACGGCGGCGGCGGCAGAGGCATCGGCATCGGCAGAGCCAGAAATAACAAC
GGGCACGGTAAAAGCAATAACAGCAGTAACCACAGCAATAGCCCCGGGGA
CAGAGGCTAGAGCGAACCCTGAGAGAGCAGCAGCAGTGGCCGGACCGGCG
GTGACAGTAGTTAGACCCCCTTTTTCTTCTGCCACCGGCACGGGAAACGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGACAACAGTGGCAGCAGTAGTG
GTGATAGTCGAGCGGCAGGAGCCCCCCCGGCTCTTACCAGCGGCGGGGCC
AAGCGAAAGTTGGGACCGGAGAGAACACGAGAGGGGAGGAGCGAGTCGCC
TCAAAAGTTTGCGTTAAGCGGCAACAACGTCGGCGGCGGCGGCGGCGGCA
GCGGCGGCGCTGTCGGCAAGAGACTGTCAGGCGAG back to top
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