mRNA_P-littoralis_Contig1086.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1086.3.1
Unique NamemRNA_P-littoralis_Contig1086.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1086.3.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 8.210e-98
Identity = 129/172 (75.00%), Postives = 148/172 (86.05%), Query Frame = 1
Query:    1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTYVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIVSTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKG 516
            W  W+RLPEG+DL++VES Y  LG+PGAVGS DCT+V WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ STKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y   G  + HTGGWLI +GGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKG
Sbjct:   22 WRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKG 193          
BLAST of mRNA_P-littoralis_Contig1086.3.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 4.350e-94
Identity = 129/172 (75.00%), Postives = 147/172 (85.47%), Query Frame = 1
Query:    1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTYVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIVSTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKG 516
            W  W+RLPEG+ L++VES Y  LG+PGAVGS DCT+V WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ STKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y   G  + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKG
Sbjct:  254 WRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKG 425          
BLAST of mRNA_P-littoralis_Contig1086.3.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 3.330e-90
Identity = 123/172 (71.51%), Postives = 145/172 (84.30%), Query Frame = 1
Query:    1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTYVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIVSTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKG 516
            WHQWV LPEG+ LK+V   Y  +G PGAV S DCT+++W  C +SETN HKGKEGYT++V+EA CDH+GRI+ STKG+PGAENDKTVVKRDLSV R++ EEPWASYK+ L+ L+G ++ HTGGWLIVDGGYHRVP LICP+K YAS  QQEWSKRFES+RKDIEC FGRLKG
Sbjct:  156 WHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKG 327          
BLAST of mRNA_P-littoralis_Contig1086.3.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 4.680e-84
Identity = 118/172 (68.60%), Postives = 134/172 (77.91%), Query Frame = 1
Query:    1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTYVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIVSTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKG 516
            W  W+RLPEG+DL++VES Y  LG+PGAVGS DCT+V WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ STKGYPGAENDKTVV                 YKYE+Y   G  + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKD+EC FGRLKG
Sbjct:   49 WRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKG 204          
BLAST of mRNA_P-littoralis_Contig1086.3.1 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 1.110e-71
Identity = 96/172 (55.81%), Postives = 131/172 (76.16%), Query Frame = 1
Query:    1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTYVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIVSTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKG 516
            W  WV+LP GD+LK+VE ++ + G+PGA+ S DCT+  W     SE  ++ GKEGY +VV EA CDH GRII +TK YPG+ENDKT+++RD S+ RI+ EEPW+S KY+LY  DG+ + + G WL+VDGGY ++PLLI P K +A+VE+ +WS+R ES+RKDIEC +GR+KG
Sbjct:   22 WDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKG 193          
BLAST of mRNA_P-littoralis_Contig1086.3.1 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 7.760e-66
Identity = 99/172 (57.56%), Postives = 123/172 (71.51%), Query Frame = 1
Query:    1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTYVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIVSTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKG 516
            W  WV+LP GD+LK+VE IY + G+PGA GS DCT+  W  C +SE N H GKEGYTS+V E  CDH+GRII +TK  PGAENDKTV+ RD S+ RI+ EEPW SY             +T  W+IVDGGY ++PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KG
Sbjct:   98 WDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKG 256          
BLAST of mRNA_P-littoralis_Contig1086.3.1 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 5.730e-61
Identity = 89/141 (63.12%), Postives = 110/141 (78.01%), Query Frame = 1
Query:    1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTYVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIVSTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPY 423
            WHQWV LPEG+ LK+V   Y  +  PG V S DCT+++   C +SETN HKGKEGYT++V+EA CDH+GRI+ STKG+PGAENDKTVVKRDLSV R++ EEPWA YK+ L+ L+G ++ HTGGWLIVDGGYHRV  +   Y
Sbjct:  144 WHQWVTLPEGEVLKKVAGEYGDMVCPGVVASVDCTHISLPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWARYKFVLFDLEGNTTEHTGGWLIVDGGYHRVSSVWVSY 284          
BLAST of mRNA_P-littoralis_Contig1086.3.1 vs. uniprot
Match: A0A6H5K4F4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4F4_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 1.670e-60
Identity = 95/190 (50.00%), Postives = 124/190 (65.26%), Query Frame = 1
Query:    1 WHQWVRLPEGDDLKQVESIYNQLGFPGA---VGSADCTYVAWERCAYSET---------------NIHKGKEGYTSVVFEAICDHAGRIIVSTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKG 516
            W  WV+LP GD+ K+VE IY + G+PGA     +A+ +                           N H GKEGYTS+V E  CDH+GRII +TK YPGAENDK V+ RD S+ R++ E+PW SYK++LY  DGT + +TG W+IVDGGY ++PLLI P KT+ +VE+  WS+R ES+RKDIEC FGR+KG
Sbjct:   33 WDTWVKLPGGDEFKKVEEIYRKCGYPGARKVXTTAETSXXXXXXXXXXXXXXXXXXXXXXXXXXXNTHTGKEGYTSLVVECTCDHSGRIIAATKTYPGAENDKKVIARDKSIWRVRDEDPWKSYKFKLYNADGTETEYTGAWIIVDGGYPKIPLLIPPIKTHNTVEEHNWSRRLESMRKDIECCFGRVKG 222          
BLAST of mRNA_P-littoralis_Contig1086.3.1 vs. uniprot
Match: A0A6H5KW69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW69_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 4.640e-52
Identity = 73/138 (52.90%), Postives = 101/138 (73.19%), Query Frame = 1
Query:    1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTYVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIVSTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLI 414
            W  WV+LP GD+LK+VE ++ + G+PGA+GS DCT+  W     SE  ++ GKEGY +VV EA CDH GRII +TK YPG+ NDKT+++RD S+ RI+ EEPW+S KY+LY  DG+ + + G WL+VDGGY +V  ++
Sbjct:   22 WDTWVKLPVGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSANDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKVKTVL 159          
BLAST of mRNA_P-littoralis_Contig1086.3.1 vs. uniprot
Match: A0A6H5K1K5_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K5_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 4.820e-51
Identity = 71/134 (52.99%), Postives = 99/134 (73.88%), Query Frame = 1
Query:    1 WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTYVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIVSTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRV 402
            W  WV+LP GD+LK+VE ++ + G+PGA+GS DCT+  W     SE  ++ GKEGY +VV EA CDH G II +TK YPG+ENDK++++RD S+ RI+ EEPW+S KY+LY  DG+ + + G WL+VDGGY ++
Sbjct:   22 WDTWVKLPVGDELKEVERVFRKSGYPGAIGSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGHIIAATKSYPGSENDKSIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKM 155          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1086.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRU1_9PHAE8.210e-9875.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L0H2_9PHAE4.350e-9475.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE3.330e-9071.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY35_9PHAE4.680e-8468.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K604_9PHAE1.110e-7155.81Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7N8_9PHAE7.760e-6657.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8G0_9PHAE5.730e-6163.12DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K4F4_9PHAE1.670e-6050.00DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KW69_9PHAE4.640e-5252.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1K5_9PHAE4.820e-5152.99Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1086contigP-littoralis_Contig1086:2150..3803 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size833
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.33e-43
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size648
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789413.435511-UTR-P-littoralis_Contig1086:2149..23341680789413.435511-UTR-P-littoralis_Contig1086:2149..2334Pylaiella littoralis U1_48UTRP-littoralis_Contig1086 2150..2334 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789413.4477155-CDS-P-littoralis_Contig1086:2334..25831680789413.4477155-CDS-P-littoralis_Contig1086:2334..2583Pylaiella littoralis U1_48CDSP-littoralis_Contig1086 2335..2583 -
1680789413.4564617-CDS-P-littoralis_Contig1086:3404..38031680789413.4564617-CDS-P-littoralis_Contig1086:3404..3803Pylaiella littoralis U1_48CDSP-littoralis_Contig1086 3405..3803 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1086.3.1prot_P-littoralis_Contig1086.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1086 2335..3803 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1086.3.1

>prot_P-littoralis_Contig1086.3.1 ID=prot_P-littoralis_Contig1086.3.1|Name=mRNA_P-littoralis_Contig1086.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=216bp
WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTYVAWERCAYSETNIH
KGKEGYTSVVFEAICDHAGRIIVSTKGYPGAENDKTVVKRDLSVNRIQHE
EPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQ
EWSKRFESVRKDIECFFGRLKGGSGCSRPAFCSTAGRRSTTPGSRLASFT
TCSCSSTAWPTLRRT*
back to top

mRNA from alignment at P-littoralis_Contig1086:2150..3803-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1086.3.1 ID=mRNA_P-littoralis_Contig1086.3.1|Name=mRNA_P-littoralis_Contig1086.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1654bp|location=Sequence derived from alignment at P-littoralis_Contig1086:2150..3803- (Pylaiella littoralis U1_48)
TGGCATCAGTGGGTTCGGCTGCCTGAGGGCGATGACCTCAAGCAAGTGGA GAGCATCTACAACCAGCTGGGTTTTCCGGGGGCCGTAGGGTCAGCCGACT GCACCTACGTGGCGTGGGAGCGTTGTGCTTATTCGGAAACGAATATCCAC AAGGGGAAGGAGGGGTACACGTCGGTTGTGTTCGAGGCGATTTGTGACCA CGCTGGCCGCATCATCGTGTCGACGAAGGGGTACCCCGGGGCGGAGAACG ACAAAACGGTGGTCAAGCGCGACTTGTCCGTCAACCGGATCCAACACGAG GAGCCGTGGGCGAGCTACAAGTACGAGCTGTACGGTCTCGATGGCACGAG TTCGTGGCACACGGGGGGGTGGCTGATCGTCGACGGGGGGTACCACCGGG TGAGTAAATTGTATGACGTGAGGGCAATGGTGTCGATGAAACCATGAGCG ATTGTGAGGTGTGCAGGTATAAATAGAGAGGAACCCCCACGCCCTGCAAA GCACAAGTGTGGTGCCGAAGTGTTGCTGTTGTCTTTCCATGGATACCCCT CGTGCATGCCTTGAGGGCAATGGTTTCCATTGGGTTGTTGCATAGAGTTG CAGGTAAGAATAGAGAGTACCCCCCCCCCCCAAAGCATTGAGTCGTACCG AAGTGCAGCTGTTGTCTTTCCAAGAACCCCCTGCCTCCCCGTCGAGGGGG AACCAGCCCGCTGTATTTTTCTCTAGTGTACCTTTTACGCAGACCAGAGA ACCACTTGCTCCTGTTCACTTTTGCATCTGATGTCGGATGTAGAACCCGC TGAACTAAGACCAGCTATCCCATTTGTGGGCGCCCCCCCGACGTGTGTGT TGCCGGACATTAGTTGTTCTAGGTAACAATACCACAGGCCCATCACCTCG CATATTGGTCGCTTATCACCCTCCTGATCATGCACATTGCATCGCGATCT TGCGGTCTTGCGGCACGTAGCCCCCCACTCGACAGAAGCATCTGATCAGC ATCGATATGAGGTATCCGGTTGCTCTCGTAATATCTCCGAGGATTGGTGG CTGCGGCCTACATTTTCTCTCCGGTATGCAGTCAATCGAGAGTCCCACGT TTTTTTATGCATTACTTCTTTCGAGGTTTTAAAACTGAATTTCCGGATCG ACGAAACATAGGCCCATACCACATTCATTTTTCCCTTCTTTCGCCCCTGC TCTTTTTGGCCGTACACCAGGTGCCCCTTCTCATATGCCCGTATAAAACG TACGCGAGCGTTGAACAGCAGGAGTGGAGCAAGAGATTCGAGTCAGTACG CAAGGACATCGAGTGCTTTTTCGGAAGACTCAAGGGCGGTTCAGGTTGTT CAAGACCGGCATTTTGTTCAACAGCCGGGAGAAGATCGACAACGCCTGGT TCACGGCTTGCATCATTCACAACATGCTCCTGCAGTTCGACGGCCTGGCC AACCTTGAGAAGGACATGAACTGGACGGGCAAGGATGGAGAGGCGGACGA GACCACCGGCCCTTTCCCCGCACAGACGACTGTTGGCAGCATGGATGTGG GAGCCGGCGGCGACACTAGCTTCCACACGCTCAGGGAGGAACTGGTGGAC CACTTCACATACAAGAAGAAGGGGTAAATTGTCTGGTTTCGGAGCGCGGC TAAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1086:2150..3803-

>mRNA_P-littoralis_Contig1086.3.1 ID=mRNA_P-littoralis_Contig1086.3.1|Name=mRNA_P-littoralis_Contig1086.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=648bp|location=Sequence derived from alignment at P-littoralis_Contig1086:2150..3803- (Pylaiella littoralis U1_48)
TGGCATCAGTGGGTTCGGCTGCCTGAGGGCGATGACCTCAAGCAAGTGGA
GAGCATCTACAACCAGCTGGGTTTTCCGGGGGCCGTAGGGTCAGCCGACT
GCACCTACGTGGCGTGGGAGCGTTGTGCTTATTCGGAAACGAATATCCAC
AAGGGGAAGGAGGGGTACACGTCGGTTGTGTTCGAGGCGATTTGTGACCA
CGCTGGCCGCATCATCGTGTCGACGAAGGGGTACCCCGGGGCGGAGAACG
ACAAAACGGTGGTCAAGCGCGACTTGTCCGTCAACCGGATCCAACACGAG
GAGCCGTGGGCGAGCTACAAGTACGAGCTGTACGGTCTCGATGGCACGAG
TTCGTGGCACACGGGGGGGTGGCTGATCGTCGACGGGGGGTACCACCGGG
TGCCCCTTCTCATATGCCCGTATAAAACGTACGCGAGCGTTGAACAGCAG
GAGTGGAGCAAGAGATTCGAGTCAGTACGCAAGGACATCGAGTGCTTTTT
CGGAAGACTCAAGGGCGGTTCAGGTTGTTCAAGACCGGCATTTTGTTCAA
CAGCCGGGAGAAGATCGACAACGCCTGGTTCACGGCTTGCATCATTCACA
ACATGCTCCTGCAGTTCGACGGCCTGGCCAACCTTGAGAAGGACATGA
back to top