prot_P-littoralis_Contig108.69.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig108.69.1
Unique Nameprot_P-littoralis_Contig108.69.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length117
Homology
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BLAST of mRNA_P-littoralis_Contig108.69.1 vs. uniprot
Match: A0A6H5KH92_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH92_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 9.100e-8
Identity = 32/73 (43.84%), Postives = 42/73 (57.53%), Query Frame = 0 
Query:   22 VPAKRTEDGRVWGSVRVKGARDCMNPDCTQRSSSGCSCAE-CKEGGDSGALMCRTCFKNEASHTAPAVARVNG 93
            VP  +   G+V GSV++K    CMNP C +R   GC+C E C   G +G LMC+TCF +   H A A A  +G
Sbjct:  269 VPLAQQPTGKVLGSVQLKSQLLCMNPACPKRKLKGCTCEEFCAFEGQTGVLMCKTCFLDTDRHAAAAEAHWHG 341
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig108.69.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KH92_9PHAE9.100e-843.84DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig108contigP-littoralis_Contig108:222951..223312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig108.69.1mRNA_P-littoralis_Contig108.69.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig108 222599..223742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig108.69.1 ID=prot_P-littoralis_Contig108.69.1|Name=mRNA_P-littoralis_Contig108.69.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=117bp
MARGLMGRCDVGSLNTGGRRQVPAKRTEDGRVWGSVRVKGARDCMNPDCT
QRSSSGCSCAECKEGGDSGALMCRTCFKNEASHTAPAVARVNGTTGKRRK
KAHGVAQEVKRILFFR*
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