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Homology
BLAST of mRNA_P-littoralis_Contig1.264.2 vs. uniprot
Match: D7FT37_ECTSI (CDP-alcohol phosphatidyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT37_ECTSI) HSP 1 Score: 402 bits (1033), Expect = 1.510e-126 Identity = 208/239 (87.03%), Postives = 224/239 (93.72%), Query Frame = 1
Query: 2041 IDKESDRVWTVPNMITMGRIVFCPFLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWNQKARNSSVLGGFLDPLADKVMVTTVALALGQEGIIPAALVAVMVGRDALLIAGSLAYRYKTRQAGDAFFDLDSIDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSGLCVATGVATLASGANYLLVSGLKPRGKLGKRFMIQRETLQERYRQREVLVREKMGVGRERLRLRK 2757
++KESDRVWTVPNMITMGRI FCP LA LIVTSQHELALAGLLAASLTDWLDGYIARKW Q +SVLGGFLDPLADKVMVTTVALALGQ+GI+P ALVA+MVGRDALLIAGS+AYR+KTR+ GDAFFDLDS+DYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFS LCV TGVATLASG NYLLVSGLKP+G+LGKR MIQRE LQERYR+REVLVRE+MGVGRER+R+RK
Sbjct: 2 VEKESDRVWTVPNMITMGRIAFCPVLASLIVTSQHELALAGLLAASLTDWLDGYIARKWKQ----TSVLGGFLDPLADKVMVTTVALALGQQGIVPTALVALMVGRDALLIAGSIAYRFKTRREGDAFFDLDSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYLLVSGLKPKGRLGKRLMIQRENLQERYREREVLVRERMGVGRERMRVRK 236
BLAST of mRNA_P-littoralis_Contig1.264.2 vs. uniprot
Match: A0A6H5KUV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV6_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 3.150e-123 Identity = 207/239 (86.61%), Postives = 222/239 (92.89%), Query Frame = 1
Query: 2041 IDKESDRVWTVPNMITMGRIVFCPFLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWNQKARNSSVLGGFLDPLADKVMVTTVALALGQEGIIPAALVAVMVGRDALLIAGSLAYRYKTRQAGDAFFDLDSIDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSGLCVATGVATLASGANYLLVSGLKPRGKLGKRFMIQRETLQERYRQREVLVREKMGVGRERLRLRK 2757
I KESDRVWTVPNMITMGRI FCP LAGLIVTSQHELALAGLLAASLTDWLDGYIARKW Q +SVLGGFLDPLADKVMVTTVALALGQ+GI+PAALVA+MVGRDALLI GS+AYR+KTR+ GD FFDLDS+DYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFS LCV TGVATLASG NYLLVSGLKP+G+LGKR MIQR+ LQERYR+REVLVRE+MG GRER+R+RK
Sbjct: 145 IKKESDRVWTVPNMITMGRIAFCPVLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWKQ----TSVLGGFLDPLADKVMVTTVALALGQQGIVPAALVALMVGRDALLITGSIAYRFKTRREGDDFFDLDSLDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSALCVGTGVATLASGVNYLLVSGLKPKGRLGKRLMIQRQNLQERYREREVLVRERMGAGRERMRVRK 379
BLAST of mRNA_P-littoralis_Contig1.264.2 vs. uniprot
Match: A0A4D9CZ77_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ77_9STRA) HSP 1 Score: 164 bits (415), Expect = 3.780e-42 Identity = 97/203 (47.78%), Postives = 130/203 (64.04%), Query Frame = 1
Query: 2062 VWTVPNMITMGRIVFCPFLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWNQKARNSSVLGGFLDPLADKVMVTTVALALGQEGIIPAALVAVMVGRDALLIAGSLAYRYKTRQAGDAFFDLDS-IDYKVTPSTLSKVNTVLQFGTLWLGLTNSVY--LVPG--DAVFSGLCVATGVATLASGANYLLVSG----LKPRGK 2643
+WTVPN+IT+ RI+ P LAGLI+ ++ A+ GL A+ +DWLDG+IA+ +NQ SSVLG FLDPLADKV+V +A+ L +G+IP L+ V++GRDALLI GS R + R AG FFD S +++TP+ LSK+NT LQF L L +++ +P D VF LC TG T+ SG YL G L+ RGK
Sbjct: 1 MWTVPNIITLARILSSPLLAGLILQGRYSYAVMGLAVAAGSDWLDGHIAKNYNQ----SSVLGSFLDPLADKVLVAALAVPLAFQGLIPTPLLVVVLGRDALLIGGSFIKRLQNRPAGAPFFDTSSSATFQITPNLLSKINTTLQFTVLTFALCRALWGDAIPAAVDEVFEPLCWLTGGTTVGSGLTYLAGDGTGSLLRKRGK 199
BLAST of mRNA_P-littoralis_Contig1.264.2 vs. uniprot
Match: W7TR40_9STRA (Cdp-diacylglycerol--glycerol-3-phosphate 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TR40_9STRA) HSP 1 Score: 165 bits (417), Expect = 7.480e-41 Identity = 101/222 (45.50%), Postives = 138/222 (62.16%), Query Frame = 1
Query: 2005 SDRSEEEMTKPAIDKESDRVWTVPNMITMGRIVFCPFLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWNQKARNSSVLGGFLDPLADKVMVTTVALALGQEGIIPAALVAVMVGRDALLIAGSLAYRYKTRQAGDAFFDL-DSIDYKVTPSTLSKVNTVLQFGTLWLGLTNSVY--LVPG--DAVFSGLCVATGVATLASGANYLLVSG----LKPRGK 2643
SD S+ + +P +E+ +WTVPN+IT+ RI+ P LAGLI+ ++ A+ GL A+ +DWLDG+IA+ +NQ SSVLG FLDPLADKV+V +A+ L +G IP L+ V++GRDALLI GS R + R G FFD S +++TP+ LSK+NT LQF L L +++ +P D VF LC TG T+ SG YL G L+ RGK
Sbjct: 114 SDPSKTTIKRPPSSRET--MWTVPNIITLARIISSPLLAGLILQGRYSYAVMGLAVAAGSDWLDGHIAKNYNQ----SSVLGSFLDPLADKVLVAALAVPLALQGFIPTPLLVVVLGRDALLIGGSFIKRLQNRPVGAPFFDTASSATFQITPNLLSKINTTLQFIVLTFALCRALWGDAIPAAVDEVFEPLCWLTGGTTVGSGLTYLAGDGTGSLLRKRGK 329
BLAST of mRNA_P-littoralis_Contig1.264.2 vs. uniprot
Match: A0A1V9ZN07_9STRA (Cardiolipin synthetase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZN07_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.010e-40 Identity = 92/196 (46.94%), Postives = 125/196 (63.78%), Query Frame = 1
Query: 2035 PAIDKESD--RVWTVPNMITMGRIVFCPFLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWNQKARNSSVLGGFLDPLADKVMVTTVALALGQEGIIPAALVAVMVGRDALLIAGSLAYRYKTRQAGDAFFDLDSI-DYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSGLCVATGVATLASGANYL 2613
P DK D +V TVPN IT RI+ P+L LIV+ + A+ L AA L+DWLDGY+ARK QK +++G FLDPLADKVMV T+ +++G G++P LV V+ GRD LLI G+L +RY T+ + FF D + ++V PS LSK NT LQF TL L N+ + VPGD + + + ++T ASG+ YL
Sbjct: 31 PPADKPQDPHKVVTVPNAITFTRILSTPYLGYLIVSGSYPAAVGVLGAAGLSDWLDGYLARKLKQK----TIVGTFLDPLADKVMVGTLCVSMGYTGLLPLPLVIVIFGRDLLLIGGTLYHRYHTKTSNSDFFQTDDLTSFEVNPSLLSKANTALQFATLGGALLNAAFQVPGDLALNVMFGSVAISTFASGSMYL 222
BLAST of mRNA_P-littoralis_Contig1.264.2 vs. uniprot
Match: A0A067CS69_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CS69_SAPPC) HSP 1 Score: 158 bits (400), Expect = 1.140e-39 Identity = 89/196 (45.41%), Postives = 127/196 (64.80%), Query Frame = 1
Query: 2035 PAIDKESD--RVWTVPNMITMGRIVFCPFLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWNQKARNSSVLGGFLDPLADKVMVTTVALALGQEGIIPAALVAVMVGRDALLIAGSLAYRYKTRQAGDAFFDLDSI-DYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSGLCVATGVATLASGANYL 2613
P+ +K +D +V T+PN IT RI+ P+L LIV+ + A+ L AA +DWLDGY+ARK NQK +++G FLDPLADKVMV T+ +++G G++P L+ V+ GRD LLI G+L +RY T+ AFF D + ++V PS LSK NT LQF TL L N+ + +PGD + + + ++T ASG+ YL
Sbjct: 51 PSKEKANDPHQVVTLPNAITFTRILSTPYLGYLIVSGSYPAAIGVLGAAGFSDWLDGYLARKLNQK----TIVGTFLDPLADKVMVGTLCVSMGYAGLLPLPLIVVIFGRDLLLIGGTLYHRYHTKTNSSAFFQTDDLTSFEVNPSNLSKANTALQFATLGGALLNAAFHMPGDLAMNVMFGSVALSTFASGSMYL 242
BLAST of mRNA_P-littoralis_Contig1.264.2 vs. uniprot
Match: A0A8K1CPA2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPA2_PYTOL) HSP 1 Score: 159 bits (403), Expect = 1.370e-39 Identity = 89/186 (47.85%), Postives = 121/186 (65.05%), Query Frame = 1
Query: 2059 RVWTVPNMITMGRIVFCPFLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWNQKARNSSVLGGFLDPLADKVMVTTVALALGQEGIIPAALVAVMVGRDALLIAGSLAYRYKTRQAGDAFFDL-DSIDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSGLCVATGVATLASGANYL 2613
+V VPN+IT RIV P+L LI + + A+ L AA L+DWLDGYIARK+ Q+ S++G FLDP ADK+MV T++L++ G++P LV ++ GRD LL++G+ +R KT+ A AFFD DS ++V P+ LSKVNT LQF T L LTN+ + +PGD + L G T SGA YL
Sbjct: 97 QVVNVPNVITFARIVATPYLGYLIYSGSYASAVGVLAAAGLSDWLDGYIARKFKQE----SIIGSFLDPFADKLMVGTLSLSMLSSGLLPWPLVVLVFGRDFLLVSGTFYHRLKTKAADSAFFDTSDSGAFQVAPTMLSKVNTALQFSTFGLALTNAAWQIPGDLALNTLFGVVGTTTFLSGAEYL 278
BLAST of mRNA_P-littoralis_Contig1.264.2 vs. uniprot
Match: A0A1V9YRT6_9STRA (Cardiolipin synthetase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YRT6_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.460e-38 Identity = 83/185 (44.86%), Postives = 118/185 (63.78%), Query Frame = 1
Query: 2062 VWTVPNMITMGRIVFCPFLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWNQKARNSSVLGGFLDPLADKVMVTTVALALGQEGIIPAALVAVMVGRDALLIAGSLAYRYKTRQAGDAFFDLDSI-DYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSGLCVATGVATLASGANYL 2613
V +PN IT RIV P+L LI T + AL L A +DWLDGY+ARK NQK +++G FLDPLADK+MV T+ +++ G++P ++ ++ GRD LL+ G+ +RY T+ +G FF D + ++VTPS LSKVNT LQFGTL L N+ + PG+ + L + ++T ASG+ YL
Sbjct: 51 VVNLPNAITFTRIVSTPYLGYLIATGNYPTALGVLGVAGFSDWLDGYLARKLNQK----TIVGTFLDPLADKLMVGTLCVSMAYTGLLPLPVMVIIFGRDLLLVGGTFYHRYHTKTSGSGFFQTDDLTSFEVTPSLLSKVNTALQFGTLGSALLNATFQFPGELAMNVLFGSVAISTFASGSMYL 231
BLAST of mRNA_P-littoralis_Contig1.264.2 vs. uniprot
Match: A0A024UTC6_9STRA (CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTC6_9STRA) HSP 1 Score: 150 bits (378), Expect = 9.390e-37 Identity = 90/195 (46.15%), Postives = 126/195 (64.62%), Query Frame = 1
Query: 2032 KPAIDKESDRVWTVPNMITMGRIVFCPFLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWNQKARNSSVLGGFLDPLADKVMVTTVALALGQEGIIPAALVAVMVGRDALLIAGSLAYRYKTRQAGDAFFDLDSIDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPG-DAVFSGLCVATGVATLASGANYL 2613
+P+ DK ++ T+PN+ITM RIV P+L LI+ +++ A+ L AS++DWLDGY+ARK +QK +V+G FLDPLADK+MV T+ L+LG ++P LV V+ GRD LLI G+L YR++TR A FF ++ ++V P+ SK+NT LQF TL L ++ VPG D L V+T ASG YL
Sbjct: 52 RPSNDKML-QILTLPNVITMTRIVATPYLGHLIMQGEYKYAVGVLAVASISDWLDGYLARKLDQK----TVVGTFLDPLADKLMVGTLCLSLGYVQLLPLPLVVVIFGRDLLLIGGTLLYRHRTRNASSDFFQTNNA-FEVQPTLTSKINTALQFTTLGGALLHAASPVPGSDVALQCLFAGVTVSTFASGFGYL 240
BLAST of mRNA_P-littoralis_Contig1.264.2 vs. uniprot
Match: K3WNK1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNK1_GLOUD) HSP 1 Score: 147 bits (372), Expect = 1.080e-35 Identity = 85/186 (45.70%), Postives = 118/186 (63.44%), Query Frame = 1
Query: 2059 RVWTVPNMITMGRIVFCPFLAGLIVTSQHELALAGLLAASLTDWLDGYIARKWNQKARNSSVLGGFLDPLADKVMVTTVALALGQEGIIPAALVAVMVGRDALLIAGSLAYRYKTRQAGDAFFDL-DSIDYKVTPSTLSKVNTVLQFGTLWLGLTNSVYLVPGDAVFSGLCVATGVATLASGANYL 2613
+V VPN+IT RI+ P+L+ LIV QHE A+ GL A +DWLDGYIAR + Q+ S++G FLDP ADK+M+ ++L++ G++P LV ++ GRD LL++G+ +R KT+ AFFD DS ++V P+ +SKVNT LQF LTN+ + VP D GL G T ASG+ YL
Sbjct: 77 QVVNVPNVITFARILSTPYLSYLIVDGQHEAAI-GL--AGFSDWLDGYIARTYKQE----SIIGSFLDPFADKLMIGALSLSMMWSGLLPWPLVTLIFGRDVLLVSGTFYHRLKTKDVDTAFFDTSDSGAFEVKPTMISKVNTALQFALFGFTLTNAAWQVPFDPALQGLFGVVGATTFASGSEYL 255
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FT37 |
| Preferred name | CRLS1 |
| PFAMs | CDP-OH_P_transf |
| Model size | 4341 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00002,RC00017 |
| KEGG ko | ko:K02950,ko:K08744,ko:K10737 |
| KEGG Reaction | R02030 |
| KEGG Pathway | ko00564,ko01100,ko03010,map00564,map01100,map03010 |
| KEGG Module | M00178,M00179 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000002,GO:0001101,GO:0003674,GO:0003824,GO:0003841,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006163,GO:0006164,GO:0006605,GO:0006612,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006873,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0008104,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0014070,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016780,GO:0016787,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019866,GO:0030145,GO:0030572,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032048,GO:0032049,GO:0033036,GO:0033993,GO:0034613,GO:0034641,GO:0034654,GO:0036148,GO:0042127,GO:0042171,GO:0042221,GO:0042391,GO:0042493,GO:0042592,GO:0042886,GO:0043167,GO:0043169,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043337,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0045184,GO:0046034,GO:0046390,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0046683,GO:0046872,GO:0046907,GO:0046914,GO:0047144,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051881,GO:0055082,GO:0055086,GO:0061024,GO:0065007,GO:0065008,GO:0070727,GO:0071617,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072521,GO:0072522,GO:0072657,GO:0090150,GO:0090407,GO:0097066,GO:0097068,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901698,GO:1901700,GO:1904386,GO:1905711 |
| Exons | 9 |
| Evalue | 2.75e-137 |
| EggNOG OGs | COG0558@1|root,KOG1617@2759|Eukaryota |
| Ec32 ortholog description | CDP-alcohol phosphatidyltransferase |
| Ec32 ortholog | Ec-04_002700.1 |
| EC | 2.7.8.41,3.6.4.12 |
| Description | cardiolipin synthase activity |
| Cds size | 1431 |
| COG category | I |
| BRITE | br01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03032 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789318.288082-UTR-P-littoralis_Contig1:1222910..1224356 | 1680789318.288082-UTR-P-littoralis_Contig1:1222910..1224356 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1 1222911..1224356 - |
| 1680789318.3016627-UTR-P-littoralis_Contig1:1224665..1224680 | 1680789318.3016627-UTR-P-littoralis_Contig1:1224665..1224680 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1 1224666..1224680 - |
| 1680789318.391632-UTR-P-littoralis_Contig1:1229333..1230782 | 1680789318.391632-UTR-P-littoralis_Contig1:1229333..1230782 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1 1229334..1230782 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789318.3094494-CDS-P-littoralis_Contig1:1224680..1224803 | 1680789318.3094494-CDS-P-littoralis_Contig1:1224680..1224803 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 1224681..1224803 - |
| 1680789318.3185344-CDS-P-littoralis_Contig1:1225539..1225729 | 1680789318.3185344-CDS-P-littoralis_Contig1:1225539..1225729 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 1225540..1225729 - |
| 1680789318.3273594-CDS-P-littoralis_Contig1:1226064..1226156 | 1680789318.3273594-CDS-P-littoralis_Contig1:1226064..1226156 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 1226065..1226156 - |
| 1680789318.3389127-CDS-P-littoralis_Contig1:1226719..1226854 | 1680789318.3389127-CDS-P-littoralis_Contig1:1226719..1226854 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 1226720..1226854 - |
| 1680789318.3520277-CDS-P-littoralis_Contig1:1227159..1227261 | 1680789318.3520277-CDS-P-littoralis_Contig1:1227159..1227261 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 1227160..1227261 - |
| 1680789318.3610044-CDS-P-littoralis_Contig1:1227616..1227693 | 1680789318.3610044-CDS-P-littoralis_Contig1:1227616..1227693 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 1227617..1227693 - |
| 1680789318.372003-CDS-P-littoralis_Contig1:1227971..1228083 | 1680789318.372003-CDS-P-littoralis_Contig1:1227971..1228083 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 1227972..1228083 - |
| 1680789318.381172-CDS-P-littoralis_Contig1:1228733..1229333 | 1680789318.381172-CDS-P-littoralis_Contig1:1228733..1229333 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 1228734..1229333 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.264.2 >prot_P-littoralis_Contig1.264.2 ID=prot_P-littoralis_Contig1.264.2|Name=mRNA_P-littoralis_Contig1.264.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=477bp
MILLMAVLDTKCILFSCVQSGYADQRRQNCRRILLLRPSTERCLATVTAV PATTSSPAPSPPPRSSRAVRYRNSSTRQRVAAFGSFGTNATRLPPPQAQQ VCWEPRRKWKHQHQHQGDKAVVVVMPRRTLRFSSSTFDLKQQEQQYGHDR NSTERKPEHHTDGEANVDHVRRAQLGSAARGGSGSSDRSEEEMTKPAIDK ESDRVWTVPNMITMGRIVFCPFLAGLIVTSQHELALAGLLAASLTDWLDG YIARKWNQKARNSSVLGGFLDPLADKVMVTTVALALGQEGIIPAALVAVM VGRDALLIAGSLAYRYKTRQAGDAFFDLDSIDYKVTPSTLSKVNTVLQFG TLWLGLTNSVYLVPGDAVFSGLCVATGVATLASGANYLLVSGLKPRGKLG KRFMIQRETLQERYRQREVLVREKMGVGRERLRLRKDALNDKLKARRNKV AGALKNRINKGGRARGARGFGVKKGG* back to topmRNA from alignment at P-littoralis_Contig1:1222911..1230782- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1.264.2 ID=mRNA_P-littoralis_Contig1.264.2|Name=mRNA_P-littoralis_Contig1.264.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7872bp|location=Sequence derived from alignment at P-littoralis_Contig1:1222911..1230782- (Pylaiella littoralis U1_48) GAGCTCTAAAAAGGAATTTGGGTGGCTTCCTTTTGCTGTCGCCAACACTT
TTCGAAACATTGCCGGAAAAACTCGATGCATTGCATTAACTTGGCATCAT
ATATATATATATGTATGACAGCAGTTGTGAACAAAATGATGGCACATCAT
ACTCGTAAGCAATACCAGTACATGAAGTACAAAAGCCTTAAAACCTTGTA
TTTATAATTGTAAATTTATTACACTCCGGAGTATGATACAGCAGTACTGC
TGTAGCACCACACGTGTCTCGTGTTTATTTATCCTTTACGAAGTACTTCG
AAGTATATGAAACAACAGCTGCAAGCAGATACAAACTCGCCGTGATCCAG
AACTTTCATGTTTCTCGCTACCGCTGTACCGATCTATATATGGTATTGCC
CTGCAAAATTTCAACTGCCGTTTTATGATACAAGTACCGGTACAATACAG
AGTCAGTGCCAGGAACAGCACCATCTTCCGAGTCTGAAAAGAAAAAACAA
ATTAAAGCGTGGGAACCATGAACCAGGCAGCTGGAGCTCATGACGAACGT
TTTTGTATTGTCGTGTGTGATATAGGACTCGCACCGGACTTGCTCCTATC
CGGGTAGCCCCACCGGATACCCGGTTCCAGTTTTTTTTGTCGAGTGCGAC
CCTTTGATCTCACACCCGACTTGCTCCTACCCAGGTACCCGACCTCGGGT
ACCCGGAACCGAGTAGCCCCACCGGGTACCCGGTTCCAAGTTTTTGAGTC
GGGTGCGACCATTAGTGTGATACGATGGGCAGGCCAAGTTTGCCTTTTCC
TTGGATGAACACAAAAAAAATAGAGAGAGGCTGCTGAACTGTATGGTGGC
GCACTCTCCAAGGGTCCGTGCTTCTTACCCTTCTTTACTGCAGCATCTGT
TCTGACTTCATAGAGGTACGCGTGCACGCGAAGCACATCCACCACCATGC
TGCCGTGAGAGAAAATCGTAAAAATACCAGTACAGCGTCATGTATGCATG
CCACATGACATGATTTTGTTCTATTTTTGTAGCGTTGTGTTATCATTCGG
GGCCGGTTTTGGGTCGATGGGATCACCCGCGTGATACATACACTACCTTT
TCGCGTAGGCAGCCTGTGACCACGGAAATCGTCCATGATCGGAGGAGTTC
GGACATCAGAAGGTACTAAAGGGAGATCGGAATGGTTTTTGATGTGAAGG
CAACACACAGATGATGTGCCAACTATCCGCACTTGTCATGCGTAGACTTT
GCGACCAGCCCCTTGCATTTGAGCTTGCGCTTGGCGTGCACTGAGCGGAC
TACTCACATTTTCGATTACTTCGTACTCCATACTTTAAGCAGGTGCTTGT
TTTGTCATTACGCAGCGCAACAAACAGTTTGATCGATGCTACTATTTCGA
TGTAGGGCTCTTCAGTAGGACATGGAACTTCGCAAACGTGTGCCATGACA
TGATACTACTGATGGCTGTACTTGATACGAAGTGTATTTTATTTTCTTGT
GTCCAAAGCGGGTATGCCGATCAACGCCGACAGAACTGTCGCCGCATCCT
GCTCCTGCGGCCGTCGACTGAGCGGTGCCTCGCCACCGTCACGGCCGTTC
CCGCGACGACATCATCACCAGCACCGTCACCGCCACCGCGTTCATCACGC
GCCGTGCGATATCGCAACAGCAGTACCAGGCAGAGAGTTGCCGCTTTCGG
CTCTTTTGGCACCAACGCCACCAGGTTGCCGCCGCCGCAAGCGCAACAGG
TGTGTTGGGAACCACGACGAAAATGGAAGCACCAGCACCAGCACCAGGGG
GACAAGGCAGTAGTCGTTGTCATGCCCAGGAGAACGCTACGTTTTTCTTC
TTCCACCTTCGATCTAAAACAGCAGGAGCAGCAGTATGGACACGACAGGA
ACAGCACGGAGCGGAAGCCAGAACACCACACGGACGGCGAAGCGAACGTA
GATCACGTGAGGCGAGCGCAGCTGGGGTCCGCGGCGAGAGGAGGTAGCGG
CAGCAGCGATCGCTCTGAGGAGGAGATGACCAAACCAGCCATCGACAAGG
TACGGTACATATCAGACCAGGATACGGCGATGGCATACATACAGCAGCAC
CAGCAGTGTCACAGCGGTGACGTGTTGTTCTACGTCTGGTATTGTCGTAC
GAAGAAAGTATGTAGAGGCGGTTTTGTGCCGGCACGAGGTGGTGCGCCTC
CGTCTTCGTCCATCGTGGAACGTGACATGTGTCTGTCGTTTTGAGAAGCA
GGGCGGAGGGAGAGATTATAGGATAGATCCTTGTTCGTCATTTGATGAAC
CCTTCGCACACCGCGGATGAATGTCAGCTATCTCAGCTACATAGACCGAT
GTACTTCGTGGTTGTGAGGCTTATCTGTCCGGTTTTTCTGACGTATCATA
TATTAACCTCTGTTTGGTTTCTGTGTGGTGTTTGTTCCTCTTTTCTTCTC
TCCCTCTCTCTCAAGGCATGATATTTTGTATGCTTGATAACTTATGCATA
TTTTTGCTTTGCGGTGATCTACTGCTGCATCTTTTTTAAAGGGCTCTGCT
TGTACGTATTAATTTTATTTCTCTTGCCTGTAACGACTTTCTTGTTTTTG
CCTCACCTTCCTTTCTCCTGCCTGTACCCTTTCATTTCCTGTGTTTCTTT
ACCCTTACTCTTCTGTGCTGTTTGTCGCATTCGGCCGATATAATGGAAGG
AGTCCGATAGAGTGTGGACAGTCCCCAACATGATCACCATGGGTCGGATA
GTTTTTTGTCCCTTCCTGGCCGGACTTATCGTCACGTCTCAGCATGAGCT
GGCTCTCGCCGGTGAGCCGAGGAACGTTTTGAAGGCCACGCACCCATCAG
GCTCAGAAACACCCGCGGTTTGTGTACAGCATCACCGCGGCAGGATGTGG
TGCATATCACACACATCGGGAGATAGTTTCTCGGTTCCGATAGTCGCGGT
TGCGATTTTAACGTGTGGGTGTACATCTGTCTTTTCATCGGTACCATCCT
GGGTAGGTAGCTCCTATTTTGTGCTGTGTATCTGTTGACTTTCGCATCTG
TGTACCTGGTGTGCGCAACTCTTTTCCCCTTCCTTCCAGGGCTGTTGGCG
GCGAGCTTGACGGATTGGTTGGACGGGTACATCGCGAGAAAGTGGAACCA
AAAGGCGAGGAACAGCGTTTTGTTTGCCTCTCGACCCTCTCGACCCTCTC
GACCCTCTCTCACTCGCTCACTCGCTCACTCGCTCACGTAACGCACCGCG
GCTATGTCTTCATCTCTCCCCTGCCCTCCTCTCCACTTTCTCACGGTGCC
GCCCGTCTCGCACTGAAAGTGCTGCCACGAAACCTTCGCAGTCTGCGCTG
GGAAGGTTAAGGTTTCTGGCAGCCCGTCGCCGACGAGAGAAATTACTAAA
GCTTTTCGTTTTGAGGGCAACTGCCATACCGCCTCCCACTCTGCCCTGAT
TCTGGACTCCTGCCCCCTGGTCTCGCGGTGTTCTTTTGGTCCCGAATCGT
TCTCAATTTCATTATTTACAGTCTGTGCTGGGAGGGTTTTTGGATCCGTT
GGCGGACAAGGTAATGGTCACCACGGTGGCTTTAGCGCTTGGTCAGGAAG
GAATCATCCCCGCTGCTCTAGTGGTGAGGACACAAAGGGAAACACCAAAA
ATATACCAACGAGGCTAGGCCGGGATGGGGGGTGGGGGATGGGGGGGAGA
GGAAAGATAGACTATTTGAGGTAGATACTGAGAAGATAGGGAAAAGGGGT
ATAGGGAGAGGAGGGGTGGAGAAGGGAAGAGAGAGAGCCAAGAATGACCA
GACATGTCGACGACAGTTCATCATGGTGGGCATTTCATAGTTCACTCAAA
GGTGGCGTTTTCTATGTGGGCAGAGCAAATACTGTAGTGCCACGACGGCT
GCAACACCGGTTGCTCGCTCTGTTTCAGGCGGTGATGGTTGGGCGCGACG
CGCTGCTGATCGCCGGCTCCTTGGCCTACCGCTACAAGACGAGACAAGCA
GGAGACGCTTTCTTCGACCTGGACTCGATCGACTATAAGGTCACCCCGAG
CACGCTCAGCAAAGTAAGGAACACCGGTGGTGCTGGTGATGGTGATGGTA
TTGGTGCCGCTGCTGTTGATGAGCTGAGGCGGTGGCAGCAAACGCCGTTG
CTGTTGATCCGTTTGTCCTCATGCCACCGCTCCAGCTGCTCTACCGTATG
GCACAGGACAAGGGGGAGTAGCACAGATTTGAGTCCCAAATCTTCGCCTT
GAAGTTGGTGGGGACGAGTGTGAAGAAGAGAGTGTTATCTATTCTAGCGC
ATTGCTGCACAACGCGCTCAACTTGCTCGCTCCGGTGCGTCCAGGCATGT
GCTGTACCGCAAGCAGCCGTCCGTATACCATATGCATCGGCTGGGCGGGG
GTGAGGGCCTCCCCCTGCATTCGGTAACTTTCGTTGTCAGTCTCATCTGC
TAGGCTGGTGTTTTTCCGTGCTTGTGATCATCTTTGACTGAAAGTGTTAT
TTTGACCGTCTTACCTGCCTCTGTTAGGTTGAGTGCCTCTCCCTGCGTTC
GGTAACTTTTGGTCTAAAATAGTTTTGTTTTTCTGTTTTTTTACCGAATT
TCGCTATATTGGCGGCCTCACACCAGGTGAATACTGTTCTCCAGTTCGGA
ACGCTGTGGCTCGGGCTGACAAACTCCGTCTATCTCGTCCCAGGAGACGC
CGTATTTTCGGGGCTATGGTAAGATAAAGAGCTGTGGCACGCACTGCAGC
TAGATCCCTAGTCCGGAACGTGTATGAAAGGGCGGCAGCATTGGGCCCCC
CCGCTAGTCCTTGCGCCCCAACATGATCACCAATTGAAATGTATTCCTTC
ATCAAGTGTACCATGTCATCATTTTTTCCGATACCAAAGCTCCATCACTG
CGGACGTGGGGTAACGAGAGACAGCTGATGCAACCGACTAACCCTTAACG
TCCCTCTCTCCGCCCTCCGTTCCACCAAATGGTACCCGCTTGTGCATAAC
GCCATCACGAACCCAAAACGAAATGGAAATCCTCTCGGCTACTGCACACA
AAGTGTCGCCACTGGAGTGGCCACGTTAGCGTCCGGGGCTAACTACCTCC
TCGTGTCAGGCCTGAAGCCGAGAGGGAAGCTCGGGAAACGCTTCATGATT
CAGAGGGAAACCCTGCAGGAGCGGTACCGCCAGAGGGAAGTGCTTGTCAG
GGAAAAGATGGGAGTCGGGCGGGAGCGTTTGCGGCTTAGGAAGGTACGGG
CAGACTGCTTGCTGTTCTCTGCTTGTCGTGAAGGCGCATCGCACTTCCGA
TGTTTTCGGTTTGCTCGTGTTCCTGCAACTGCTGCAGCATGTCATTTTTC
ACAGTTTTTTCACTGTTTTTCCTGGAGTGTTTGGGGGTATCATGATGATA
TCAAAGTCTTATCGGTGTTGTGCTTTCTGTGCTGCGGCGTTTCTGCTCCG
CTGTGCGGGCGGTTACCGCAGTACGATACGAACCAGCAGCGAAACCAGGA
AATATTTTATTTCACCCTGGGGGATGTTTGGATTTTCGTTGCCATCCACT
CTGAATCAAAATCATGGTGCCCGCGTTCGAGTACATGTATGTGTAGCCTC
CTGACCTCGTTGTTGATATTTTCACGCCTTCGGCTGCCACCCAAACAACC
AGCAGCGTAGGAATGTCCTGTCTCTTTTTCGTTTGTTATCGAACCAATGA
ACCCTGATATCAAAGGCTACCTGCTGGTCTTGATATACGGTACCCCCTCT
CCCCCAACCCCCCCCCCCAGCTAAGATTTGTTTTGCAGCGCATGTCGCGG
GTCTAGCGCTATCATACCCTGCCTGTGCCATGTCATGGACTACTGTCGAA
GGCGGAACTTTCTTTGAATGCGTATCGCATCCGGTACTGCTGCGGTATTG
TGTAATGGCTAAATGTCAGCAGTCGGCTATCTTGCCCTCTCTCTCCCTCT
CGCGGTGATTTCATTTCTGTGTTTCGCAGGATGCGCTAAATGACAAGCTC
AAGGCGAGGCGAAATAAGGTGGCGGGGGCCCTGAAGAACCGCATCAACAA
AGGGGGGCGGGCTAGGGGGGCTCGTGGATTTGGCGTGAAAAAGGGCGGGT
GACCACCTTCAACTCAGGTAACCAATTTCTTGGGTGATGCCATGGTTGTA
AGCGTTGATGTTGGTATCATGTCCTCGTCGATTTTGGTGTTTGGAGTTTC
GGGCCCGTGGTGTTCTTTTTTTGTTTTGGATGGTAAAAATTATTGCTGTC
TTTTGTGTCTGTCCTTGCCGTTGTTGTTTGTCTTTTACGTTTTGGTCTTT
CACGCGGTATGATCTGCTGCAGCATGTACGGGGAAAGAAAAGGGGGGGCA
AAGTACGATGGTGCCTCTCAATAGTACGCTGTGTGCTTTTAACTGTCTAC
CACCAATGGCTTGTCACGTTCAACAGGCAGCAATCAATGGTGGCCAAATC
TGAGGGTGGCCAAGACGTGATCGGCCGGATGGGGTCACGTGACATGAAGT
GACCGCGCTCGGAGAACGTCGTGCCGGCTAGAGACGAATCATGTTTTTCT
ACGGAAGATAAACCCCCTTCCACCGTGGGCATCCCCAAGCGATTCTAAGC
CCATCTCAGCAGACACACAGGCAGTCAGTCAGCAGGGAACGTCACCCCTT
CCTTGTGTGGATAGTTACTGATCATCATCATCATCCATTTGATCGCTAGA
CAGATACCGGGTTTTCGTACTGTACTCGTAGCCTGAACGGCAGAAGAAGG
GGCAGGGCGCACTATTGGCGTCGCCTCGCCCACTTTGGCGAATTTGCCGC
GGTAACGTCACTCATCGCGCATACATGCACACACTTGTATTGCTGAAATA
CAGTCGCTGTATTATACTTTGAAGTACTTCGTAATTTTTTTCCGTGACTG
GTTATCGGTGCGGCGGCACATGGTACCCAAGTCGCTCTCGTGTCGTTCAG
TTGTTCAAAGGCGTCAAAACACGCGTTACAGCTTTTAACCCTGCTTGCTC
TTCCGGGTTGGTCTTTGGCTTTTTGCTTCCAGCCCGATTCAGTTATTGTC
GGTCGTCCTCTGCGCCACCACGCACCCTTAAATGTTTGGGTCCTTTGACG
TACGCATTTAGATATAGATCATTTGTCCCTCTAGACCCTAGCAAGCCTAC
AAATCCGGGACGGATAACAATCCGGGTTTTATCTGAGAAGTGAGGTGTTG
CGCCCAACGCAATGGCCTCGTCGTGGGGTGTTCTCGGCGGGTTGCATATA
TATGCAGATGGACCCAAGAAACGCGTGTAGTGAGGCGGACCTCGCACGTA
TTGGCGCTTCATGTTTCTTGCACGTACGGGTGGCCGCTACGAAGTGCTTC
GTTCGGTTTGCGGTGTTGCCCCTTTCAGCGAGAATCGGTACCATGAACAT
GCTTTGTGGCGGGTGCGTGTCGGCTAGGAAGAGGCGGGGTTCACGACGTG
TTTGTTGCTTGTTCGCCATGTTTATTGCACAGGTCCATGCTGTACCTGAG
GCGTATGAACCGGGTGTATTTGCGGGATGCTCGAAAAATTTATTTTATTG
TATGACACACCAAAGTTTTAGAAGGAGGGTGTCATCACTGCGAACGCTCT
GTTGTTGTTTGGGTTGCTGCATTGCTGGGTGGACGACACAAAAGCTCCAC
GTTTCCCCTAGACGTGTACGGTATGACGCGTGGTATTGTTGATGGTTTGG
TGCTTTTTTCACGCACGTCGCCCATTCTGGTCTTACGAAACCTGCCATGT
CTTCCTAGACTATGAAGCCGTTCTTGCTAAGGAGTTTTTCTTCAACGGTT
TTTTGAAGTCTTACACATCACACCGGGAGTGCAGGCATTAAGCCTGCAGA
CATAACTAAACCTGTTCATTCC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1:1222911..1230782- >mRNA_P-littoralis_Contig1.264.2 ID=mRNA_P-littoralis_Contig1.264.2|Name=mRNA_P-littoralis_Contig1.264.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1431bp|location=Sequence derived from alignment at P-littoralis_Contig1:1222911..1230782- (Pylaiella littoralis U1_48) ATGATACTACTGATGGCTGTACTTGATACGAAGTGTATTTTATTTTCTTG TGTCCAAAGCGGGTATGCCGATCAACGCCGACAGAACTGTCGCCGCATCC TGCTCCTGCGGCCGTCGACTGAGCGGTGCCTCGCCACCGTCACGGCCGTT CCCGCGACGACATCATCACCAGCACCGTCACCGCCACCGCGTTCATCACG CGCCGTGCGATATCGCAACAGCAGTACCAGGCAGAGAGTTGCCGCTTTCG GCTCTTTTGGCACCAACGCCACCAGGTTGCCGCCGCCGCAAGCGCAACAG GTGTGTTGGGAACCACGACGAAAATGGAAGCACCAGCACCAGCACCAGGG GGACAAGGCAGTAGTCGTTGTCATGCCCAGGAGAACGCTACGTTTTTCTT CTTCCACCTTCGATCTAAAACAGCAGGAGCAGCAGTATGGACACGACAGG AACAGCACGGAGCGGAAGCCAGAACACCACACGGACGGCGAAGCGAACGT AGATCACGTGAGGCGAGCGCAGCTGGGGTCCGCGGCGAGAGGAGGTAGCG GCAGCAGCGATCGCTCTGAGGAGGAGATGACCAAACCAGCCATCGACAAG GAGTCCGATAGAGTGTGGACAGTCCCCAACATGATCACCATGGGTCGGAT AGTTTTTTGTCCCTTCCTGGCCGGACTTATCGTCACGTCTCAGCATGAGC TGGCTCTCGCCGGGCTGTTGGCGGCGAGCTTGACGGATTGGTTGGACGGG TACATCGCGAGAAAGTGGAACCAAAAGGCGAGGAACAGCTCTGTGCTGGG AGGGTTTTTGGATCCGTTGGCGGACAAGGTAATGGTCACCACGGTGGCTT TAGCGCTTGGTCAGGAAGGAATCATCCCCGCTGCTCTAGTGGCGGTGATG GTTGGGCGCGACGCGCTGCTGATCGCCGGCTCCTTGGCCTACCGCTACAA GACGAGACAAGCAGGAGACGCTTTCTTCGACCTGGACTCGATCGACTATA AGGTCACCCCGAGCACGCTCAGCAAAGTGAATACTGTTCTCCAGTTCGGA ACGCTGTGGCTCGGGCTGACAAACTCCGTCTATCTCGTCCCAGGAGACGC CGTATTTTCGGGGCTATGTGTCGCCACTGGAGTGGCCACGTTAGCGTCCG GGGCTAACTACCTCCTCGTGTCAGGCCTGAAGCCGAGAGGGAAGCTCGGG AAACGCTTCATGATTCAGAGGGAAACCCTGCAGGAGCGGTACCGCCAGAG GGAAGTGCTTGTCAGGGAAAAGATGGGAGTCGGGCGGGAGCGTTTGCGGC TTAGGAAGGATGCGCTAAATGACAAGCTCAAGGCGAGGCGAAATAAGGTG GCGGGGGCCCTGAAGAACCGCATCAACAAAGGGGGGCGGGCTAGGGGGGC TCGTGGATTTGGCGTGAAAAAGGGCGGGTGA back to top
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