mRNA_P-littoralis_Contig1.263.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: D7FT36_ECTSI (Aspartyl protease family A01A, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT36_ECTSI) HSP 1 Score: 444 bits (1141), Expect = 1.130e-153 Identity = 243/351 (69.23%), Postives = 265/351 (75.50%), Query Frame = 1
Query: 1 GSTSDDLPSGARKREGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGG---------VSAGRPGEGATTTGTRAMRR-------------RAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLEPGQGVWDPYACLRGNNIGGHVRSARSSTTAKRKA 987
G+ SDD +G KR+GKV+V ELL+FIFPKSLQHPLSTGRLYAF +YGPLDSN+ LRSG NG RVVSTWEIDTMCLQFEREDILQVYIS GR LFVLN+AQKEEVIAQADSHLKTAKGRGYRRQVTR EVV LLS LPR +GLVSFHDAQ LI+ YRE QIARFKVIFPEIAGG A ++ R++ G G ++D GG GR G T M RAKF+A+VAPAEMF+KD+G TPAG+ANHTSKLLSTRAYKV NIADGNDPGLTQNVKLIR+DR E GQG WDPYACLRG NIGGHVRSARSSTTAKRKA
Sbjct: 2 GAVSDDNATG--KRDGKVNVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRYASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAASKQAGRASKSCAHGNIGGGGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGKVLASTENMSTGCSGGGGAKRKGGRAKFSAEVAPAEMFVKDMGHTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA 350
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A7S3Y154_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y154_HETAK) HSP 1 Score: 238 bits (607), Expect = 9.520e-73 Identity = 144/325 (44.31%), Postives = 189/325 (58.15%), Query Frame = 1
Query: 34 RKREGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVS-AGRPGEGATTTGTRAMRRRAKFNAD-------VAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLEPGQGVWDPYACLRGNNIGGHVRSARSSTTAKRK 984
RK + +V + L+ F+FP LQHPLSTGRL+AFG+YGPLD N+ LRSG G +V +E+D MC +FERE ILQVY+ + +L+E++ E VIAQAD K AKG+ QV+R E L + LPRD G +SFHD Q IV YRE +IA KVIFPE+ G P + VS AG PG R+A +A VAP EMF K GFT M++ ++LLS A+++ +I GN LTQNV+L+RE R + G+ WD +CLRG+NIGGHV++A+S+TT KRK
Sbjct: 36 RKAQVQVSLESLMVFLFPPGLQHPLSTGRLFAFGLYGPLDENSQLRSGHKGQHIVQRFELDAMCQRFEREIILQVYLGSD-SFELLSESEVEAVIAQADRRTKVAKGKAGMPQVSREEAAALFADLPRDADGRLSFHDMQRKIVEYREQKIAELKVIFPELMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-PQQAAVSDAGEPGSXXXXFKLMDAGRQAPVSAKKKGLSRRVAPPEMFQKGTGFTEMEMSSQVNQLLSKHAFRITDIEHGNASELTQNVQLLREIREPDDGR-KWDSNSCLRGSNIGGHVKTAKSATTVKRK 357
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A7S2B712_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B712_9STRA) HSP 1 Score: 229 bits (583), Expect = 6.170e-70 Identity = 137/308 (44.48%), Postives = 180/308 (58.44%), Query Frame = 1
Query: 76 FIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQA-GLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIR---EDRPLEP-GQGVWDPYACLRGNNIGGHVRSARSSTTAKRK 984
F+FP++LQHP+STGRL+AFG YGPLD++A LRSG G VV WE+DTMC QFEREDILQ+Y+ G+ L E Q EE++AQADS LK AKG+ +QVT EV + S L D A GL+ FHD Q I+ YR+ I K +FPE+ + S +S + P G+ T GR +TG R R + A VAPA MF++D G +A+ T+KLL +A+ + NIADGN LT NV+L+R +D P G+ WD RG +G V++ +SSTT KRK
Sbjct: 7 FVFPQNLQHPMSTGRLFAFGFYGPLDADARLRSGHKGQHVVGNWELDTMCRQFEREDILQIYMLPGQTHSNLTEDQAEEILAQADSRLKVAKGKAMMKQVTPEEVDMIFSDLEPDPATGLLQFHDCQQRIIEYRQYCIKLNKEVFPEVTSKAKRIGSLKSGPEFTPIGPLGA----------TYNEFGPGR------STGRRT--RGVRVGASVAPATMFLRDKGLNSMEVASSTNKLLCHKAFSLCNIADGNSSELTANVRLVRSEPKDSAYTPEGRSTWDRNHATRGQLMGAFVKAPKSSTTVKRK 296
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A7S4A522_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A522_9STRA) HSP 1 Score: 215 bits (547), Expect = 1.320e-63 Identity = 121/294 (41.16%), Postives = 172/294 (58.50%), Query Frame = 1
Query: 43 EGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIRED-RPLEPGQGVWDPYACL 921
E V + +L+ F+FP L HPLSTGRLYAFG YGPLD LRSG G V+ WE+D MC QFERED LQVY+S+GRAL L+E Q+ E+I+QAD+ +K+ +G+G Q+++ EV + G+ G + FH+ Q ++A+RE++I + +V++P +A + P V +G S + R + T+ R+ R AK + VAP MF KD G + +A +++L TRAYK+ +I D N P LTQNV LIRED + E G+G W +CL
Sbjct: 75 ESLVSIDDLISFVFPADLYHPLSTGRLYAFGFYGPLDRQQQLRSGPKGQHVLGRWELDAMCHQFEREDCLQVYVSEGRALCTLSEEQQNELISQADARMKSKRGKGLMPQLSKDEVRDIFEGVETSPDGTMRFHEMQQRVLAFREDRIKKMRVMYPLVA-------------RKPLRVGFGGSQTASRK----------------SLTSTKRSRRTTAKVSPAVAPPTMFQKDKGLRNSDVATRINRMLCTRAYKICDIGD-NTPELTQNVALIREDDKDRELGEGPW---SCL 335
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A835ZGK5_9STRA (Putative aspartyl protease family A01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK5_9STRA) HSP 1 Score: 194 bits (493), Expect = 2.780e-56 Identity = 123/317 (38.80%), Postives = 170/317 (53.63%), Query Frame = 1
Query: 34 RKREGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSN-RSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHT--------------------SKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLEPGQGV-WDPYAC 918
R + +V + +LL FIFP LQHPLS+GRL FG YGP N L SG+ G+ VV WE+D+MC +RED+LQVY+S R L L AQ+EE+IAQ+ Q+TR +V+ L G+PR SFHD Q ++VAYR+ ++A K+++P +A A +KS R A+S E G++++ R ++G + KF+ DVAPA MF+KD G MA +KLLST+A+K+ +I DGN+P LT NV+LIRED +P G WD C
Sbjct: 22 RAKAARVFLDDLLKFIFPVHLQHPLSSGRLIVFGYYGP-PVNGQLHSGQRGEHVVGDWELDSMCTTIDREDVLQVYVSDDRPLCELLAAQQEEIIAQSTVTFP---------QITREQVIALFEGVPRGTDNAFSFHDVQKVVVAYRDRRVADGKIMYPSLA---AHSKSPPRKRAQS---TEKGTATAAQRQSPISRG--------------------HKFKFSPDVAPATMFLKDKGLGDMEMATQRPLHSIQTINEVLLLTCMVQINKLLSTKAFKISSIEDGNNPSLTGNVRLIREDTTHQPQGGAQWDETCC 302
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A7S2RFT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT5_9STRA) HSP 1 Score: 157 bits (398), Expect = 1.150e-43 Identity = 93/211 (44.08%), Postives = 123/211 (58.29%), Query Frame = 1
Query: 106 LSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIK 738
+STGRL AFG +GPLD A LRSG G VVS WE+DTMC QFEREDILQVY+ +G++ L E + E++AQAD+ +K AKG+ +QVT EV +L + L RD+ GL++FHD Q I+ +REN I KVIFP + G+ K A P G +G K G SA + R + ++ + VAP EMF+K
Sbjct: 1 MSTGRLLAFGFHGPLDHAARLRSGYLGQHVVSRWELDTMCRQFEREDILQVYMQKGQSPSALAEEEALELLAQADTRMKVAKGKALMKQVTEEEVRELFADLHRDEDGLLTFHDMQQRIMQFRENAIKSNKVIFPHLTPGVGKP-----GASPPSGERHGGQ----------KSGTSARK---------DRRKKTSSRVSESVAPLEMFLK 187
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A3R7K4N4_9STRA (NDK domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K4N4_9STRA) HSP 1 Score: 152 bits (384), Expect = 8.720e-39 Identity = 99/291 (34.02%), Postives = 145/291 (49.83%), Query Frame = 1
Query: 40 REGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLE-PGQGVWDP 909
+ G +D+ +LL+F+FPK LQHP S GRL+ FG+YGPLDS++ LRSG G VV+ E+ TM + EREDIL VY ++ L++ ++EEV+ Q D LK Q T ++ L S L RD G ++FHD Q ++ R ++ K G L + + R+ TR + + AP+ F+KDVG T A S+LLSTRA+++ + DGN P LTQNV+L+R D+ + + W+P
Sbjct: 207 KSGAMDLDQLLNFLFPKHLQHPNSAGRLFVFGLYGPLDSHSRLRSGERGLHVVTDRELTTMSTRIEREDILAVY-----SMCSLSQEEEEEVVRQVDRLLKCYP------QYTPRDIETLFSPLLRDADGNMNFHDMQRAVMKERLRRVVCMKERLHPALGVLVRNQFARTL---------------------------------------TRLTATKGDSLVNGAPSSFFLKDVGATDVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLVRPDKAQQFVNRDPWNP 447
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A329S5P5_9STRA (NDK domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S5P5_9STRA) HSP 1 Score: 148 bits (374), Expect = 3.250e-37 Identity = 95/275 (34.55%), Postives = 140/275 (50.91%), Query Frame = 1
Query: 52 VDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDR 876
+ +G+LL+F+FP+ LQHP S GRL+ FG+YGPLD+++ LRSG G VV+ E+ TM + EREDIL VY + L++ ++EEV+ Q D LK Q T ++ L + LPRD G +SFHD Q ++ R ++ K + LA+ NR + T TR ++ + AP+ F+KD+G T A S+LLSTRA+++ + DGN P LTQN +L+R D+
Sbjct: 237 MGLGQLLNFLFPEHLQHPTSAGRLFVFGLYGPLDAHSRLRSGEKGLHVVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVRQVDHLLKRFP------QYTPRDIETLFAPLPRDSEGSMSFHDMQQTVLKERLRRVVCMK---ERLHPALAEPVRNRFSR------------------------------------TLTRLTVTKSDSLVNGAPSSFFLKDIGATNVESAAFVSRLLSTRAFQICQMEDGNSPELTQNARLVRPDK 461
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: G5A5E0_PHYSP (Peptidase A1 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A5E0_PHYSP) HSP 1 Score: 150 bits (380), Expect = 6.960e-37 Identity = 106/305 (34.75%), Postives = 154/305 (50.49%), Query Frame = 1
Query: 19 LPSGARK--REGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKV-IFPEIA----GGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLEP-GQGVWDP 909
LPSG + + +G+LL+F+FP+ LQHP S GRL+ FG+YGPLD+++ LRSG G VV+ E+ TM + EREDIL VY + L++ ++EEV+ Q D LK Q T ++ +L + LPRD G +SFHD Q ++ R ++ K + P +A A+T + SA K GG+ G AP+ F+KDVG T A S+LLSTRA+++ + DGN P LTQNV+L+R D+ + + W+P
Sbjct: 563 LPSGGANPGKSAVMGLGQLLNFMFPEHLQHPNSAGRLFVFGLYGPLDAHSRLRSGEKGLHVVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVRQVDHLLKKFP------QYTPRDIEKLFAPLPRDSDGNMSFHDMQRAVLKERLRRVVCMKERLHPALAEPVRNQFARTLTRLSAKKD--------------------GGLVNG------------------------APSSFFLKDVGATNVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLLRPDKAQKSLEREPWNP 812
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: V9ENW6_PHYPR (NDK domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9ENW6_PHYPR) HSP 1 Score: 147 bits (371), Expect = 9.370e-37 Identity = 99/295 (33.56%), Postives = 146/295 (49.49%), Query Frame = 1
Query: 52 VDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLE-PGQGVWDPYACLRGNN 933
+ + +LL+F+FP+ LQHP S GRL+ FG+YGPLD + LRSG G +V+ E+ TM + EREDIL VY + L++ ++EEV+ Q D LK Q T ++ L + LPRD G +SFHD Q ++ R ++ K + LA+ NR + T TR ++ + AP+ F+KDVG T A S+LLSTRA+++ + DGN P LTQNV+L+R D+ + + W+P R +N
Sbjct: 239 MGLDQLLNFLFPEHLQHPTSAGRLFVFGLYGPLDEYSRLRSGEKGLHIVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVCQVDHLLKRFP------QYTPRDIETLFAPLPRDSDGNMSFHDMQQAVLKERLRRVVCMK---ERLHPALAEPVRNRFSR------------------------------------TLTRVTATKSSGLVNGAPSSFFLKDVGATNVENAALVSRLLSTRAFQICQMEDGNSPALTQNVRLVRFDKAQKFVEREPWNPNCQKRSHN 483 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.263.2 >prot_P-littoralis_Contig1.263.2 ID=prot_P-littoralis_Contig1.263.2|Name=mRNA_P-littoralis_Contig1.263.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=285bp MYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFback to top mRNA from alignment at P-littoralis_Contig1:1220110..1222172+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.263.2 ID=mRNA_P-littoralis_Contig1.263.2|Name=mRNA_P-littoralis_Contig1.263.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2063bp|location=Sequence derived from alignment at P-littoralis_Contig1:1220110..1222172+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1220110..1222172+ >mRNA_P-littoralis_Contig1.263.2 ID=mRNA_P-littoralis_Contig1.263.2|Name=mRNA_P-littoralis_Contig1.263.2|organism=Pylaiella littoralis U1_48|type=CDS|length=855bp|location=Sequence derived from alignment at P-littoralis_Contig1:1220110..1222172+ (Pylaiella littoralis U1_48)back to top |