mRNA_P-littoralis_Contig1.263.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1.263.2
Unique NamemRNA_P-littoralis_Contig1.263.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: D7FT36_ECTSI (Aspartyl protease family A01A, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT36_ECTSI)

HSP 1 Score: 444 bits (1141), Expect = 1.130e-153
Identity = 243/351 (69.23%), Postives = 265/351 (75.50%), Query Frame = 1
Query:    1 GSTSDDLPSGARKREGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGG---------VSAGRPGEGATTTGTRAMRR-------------RAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLEPGQGVWDPYACLRGNNIGGHVRSARSSTTAKRKA 987
            G+ SDD  +G  KR+GKV+V ELL+FIFPKSLQHPLSTGRLYAF +YGPLDSN+ LRSG NG RVVSTWEIDTMCLQFEREDILQVYIS GR LFVLN+AQKEEVIAQADSHLKTAKGRGYRRQVTR EVV LLS LPR  +GLVSFHDAQ LI+ YRE QIARFKVIFPEIAGG A  ++ R++     G   G   ++D       GG            GR   G     T  M               RAKF+A+VAPAEMF+KD+G TPAG+ANHTSKLLSTRAYKV NIADGNDPGLTQNVKLIR+DR  E GQG WDPYACLRG NIGGHVRSARSSTTAKRKA
Sbjct:    2 GAVSDDNATG--KRDGKVNVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRYASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAASKQAGRASKSCAHGNIGGGGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGKVLASTENMSTGCSGGGGAKRKGGRAKFSAEVAPAEMFVKDMGHTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA 350          
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A7S3Y154_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y154_HETAK)

HSP 1 Score: 238 bits (607), Expect = 9.520e-73
Identity = 144/325 (44.31%), Postives = 189/325 (58.15%), Query Frame = 1
Query:   34 RKREGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVS-AGRPGEGATTTGTRAMRRRAKFNAD-------VAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLEPGQGVWDPYACLRGNNIGGHVRSARSSTTAKRK 984
            RK + +V +  L+ F+FP  LQHPLSTGRL+AFG+YGPLD N+ LRSG  G  +V  +E+D MC +FERE ILQVY+    +  +L+E++ E VIAQAD   K AKG+    QV+R E   L + LPRD  G +SFHD Q  IV YRE +IA  KVIFPE+ G                               P +  VS AG PG            R+A  +A        VAP EMF K  GFT   M++  ++LLS  A+++ +I  GN   LTQNV+L+RE R  + G+  WD  +CLRG+NIGGHV++A+S+TT KRK
Sbjct:   36 RKAQVQVSLESLMVFLFPPGLQHPLSTGRLFAFGLYGPLDENSQLRSGHKGQHIVQRFELDAMCQRFEREIILQVYLGSD-SFELLSESEVEAVIAQADRRTKVAKGKAGMPQVSREEAAALFADLPRDADGRLSFHDMQRKIVEYREQKIAELKVIFPELMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-PQQAAVSDAGEPGSXXXXFKLMDAGRQAPVSAKKKGLSRRVAPPEMFQKGTGFTEMEMSSQVNQLLSKHAFRITDIEHGNASELTQNVQLLREIREPDDGR-KWDSNSCLRGSNIGGHVKTAKSATTVKRK 357          
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A7S2B712_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B712_9STRA)

HSP 1 Score: 229 bits (583), Expect = 6.170e-70
Identity = 137/308 (44.48%), Postives = 180/308 (58.44%), Query Frame = 1
Query:   76 FIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQA-GLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIR---EDRPLEP-GQGVWDPYACLRGNNIGGHVRSARSSTTAKRK 984
            F+FP++LQHP+STGRL+AFG YGPLD++A LRSG  G  VV  WE+DTMC QFEREDILQ+Y+  G+    L E Q EE++AQADS LK AKG+   +QVT  EV  + S L  D A GL+ FHD Q  I+ YR+  I   K +FPE+     +  S +S  +  P    G+          T      GR      +TG R   R  +  A VAPA MF++D G     +A+ T+KLL  +A+ + NIADGN   LT NV+L+R   +D    P G+  WD     RG  +G  V++ +SSTT KRK
Sbjct:    7 FVFPQNLQHPMSTGRLFAFGFYGPLDADARLRSGHKGQHVVGNWELDTMCRQFEREDILQIYMLPGQTHSNLTEDQAEEILAQADSRLKVAKGKAMMKQVTPEEVDMIFSDLEPDPATGLLQFHDCQQRIIEYRQYCIKLNKEVFPEVTSKAKRIGSLKSGPEFTPIGPLGA----------TYNEFGPGR------STGRRT--RGVRVGASVAPATMFLRDKGLNSMEVASSTNKLLCHKAFSLCNIADGNSSELTANVRLVRSEPKDSAYTPEGRSTWDRNHATRGQLMGAFVKAPKSSTTVKRK 296          
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A7S4A522_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A522_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.320e-63
Identity = 121/294 (41.16%), Postives = 172/294 (58.50%), Query Frame = 1
Query:   43 EGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIRED-RPLEPGQGVWDPYACL 921
            E  V + +L+ F+FP  L HPLSTGRLYAFG YGPLD    LRSG  G  V+  WE+D MC QFERED LQVY+S+GRAL  L+E Q+ E+I+QAD+ +K+ +G+G   Q+++ EV  +  G+     G + FH+ Q  ++A+RE++I + +V++P +A             + P  V +G S +  R                 + T+  R+ R  AK +  VAP  MF KD G   + +A   +++L TRAYK+ +I D N P LTQNV LIRED +  E G+G W   +CL
Sbjct:   75 ESLVSIDDLISFVFPADLYHPLSTGRLYAFGFYGPLDRQQQLRSGPKGQHVLGRWELDAMCHQFEREDCLQVYVSEGRALCTLSEEQQNELISQADARMKSKRGKGLMPQLSKDEVRDIFEGVETSPDGTMRFHEMQQRVLAFREDRIKKMRVMYPLVA-------------RKPLRVGFGGSQTASRK----------------SLTSTKRSRRTTAKVSPAVAPPTMFQKDKGLRNSDVATRINRMLCTRAYKICDIGD-NTPELTQNVALIREDDKDRELGEGPW---SCL 335          
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A835ZGK5_9STRA (Putative aspartyl protease family A01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK5_9STRA)

HSP 1 Score: 194 bits (493), Expect = 2.780e-56
Identity = 123/317 (38.80%), Postives = 170/317 (53.63%), Query Frame = 1
Query:   34 RKREGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSN-RSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHT--------------------SKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLEPGQGV-WDPYAC 918
            R +  +V + +LL FIFP  LQHPLS+GRL  FG YGP   N  L SG+ G+ VV  WE+D+MC   +RED+LQVY+S  R L  L  AQ+EE+IAQ+              Q+TR +V+ L  G+PR      SFHD Q ++VAYR+ ++A  K+++P +A   A +KS  R  A+S    E G++++  R    ++G                     + KF+ DVAPA MF+KD G     MA                       +KLLST+A+K+ +I DGN+P LT NV+LIRED   +P  G  WD   C
Sbjct:   22 RAKAARVFLDDLLKFIFPVHLQHPLSSGRLIVFGYYGP-PVNGQLHSGQRGEHVVGDWELDSMCTTIDREDVLQVYVSDDRPLCELLAAQQEEIIAQSTVTFP---------QITREQVIALFEGVPRGTDNAFSFHDVQKVVVAYRDRRVADGKIMYPSLA---AHSKSPPRKRAQS---TEKGTATAAQRQSPISRG--------------------HKFKFSPDVAPATMFLKDKGLGDMEMATQRPLHSIQTINEVLLLTCMVQINKLLSTKAFKISSIEDGNNPSLTGNVRLIREDTTHQPQGGAQWDETCC 302          
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A7S2RFT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT5_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.150e-43
Identity = 93/211 (44.08%), Postives = 123/211 (58.29%), Query Frame = 1
Query:  106 LSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIK 738
            +STGRL AFG +GPLD  A LRSG  G  VVS WE+DTMC QFEREDILQVY+ +G++   L E +  E++AQAD+ +K AKG+   +QVT  EV +L + L RD+ GL++FHD Q  I+ +REN I   KVIFP +  G+ K       A  P G  +G            K G SA +          R  +  ++ +  VAP EMF+K
Sbjct:    1 MSTGRLLAFGFHGPLDHAARLRSGYLGQHVVSRWELDTMCRQFEREDILQVYMQKGQSPSALAEEEALELLAQADTRMKVAKGKALMKQVTEEEVRELFADLHRDEDGLLTFHDMQQRIMQFRENAIKSNKVIFPHLTPGVGKP-----GASPPSGERHGGQ----------KSGTSARK---------DRRKKTSSRVSESVAPLEMFLK 187          
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A3R7K4N4_9STRA (NDK domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K4N4_9STRA)

HSP 1 Score: 152 bits (384), Expect = 8.720e-39
Identity = 99/291 (34.02%), Postives = 145/291 (49.83%), Query Frame = 1
Query:   40 REGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLE-PGQGVWDP 909
            + G +D+ +LL+F+FPK LQHP S GRL+ FG+YGPLDS++ LRSG  G  VV+  E+ TM  + EREDIL VY     ++  L++ ++EEV+ Q D  LK         Q T  ++  L S L RD  G ++FHD Q  ++  R  ++   K       G L + +  R+                                        TR    +     + AP+  F+KDVG T    A   S+LLSTRA+++  + DGN P LTQNV+L+R D+  +   +  W+P
Sbjct:  207 KSGAMDLDQLLNFLFPKHLQHPNSAGRLFVFGLYGPLDSHSRLRSGERGLHVVTDRELTTMSTRIEREDILAVY-----SMCSLSQEEEEEVVRQVDRLLKCYP------QYTPRDIETLFSPLLRDADGNMNFHDMQRAVMKERLRRVVCMKERLHPALGVLVRNQFARTL---------------------------------------TRLTATKGDSLVNGAPSSFFLKDVGATDVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLVRPDKAQQFVNRDPWNP 447          
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: A0A329S5P5_9STRA (NDK domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S5P5_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.250e-37
Identity = 95/275 (34.55%), Postives = 140/275 (50.91%), Query Frame = 1
Query:   52 VDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDR 876
            + +G+LL+F+FP+ LQHP S GRL+ FG+YGPLD+++ LRSG  G  VV+  E+ TM  + EREDIL VY      +  L++ ++EEV+ Q D  LK         Q T  ++  L + LPRD  G +SFHD Q  ++  R  ++   K     +   LA+   NR +                                     T TR    ++    + AP+  F+KD+G T    A   S+LLSTRA+++  + DGN P LTQN +L+R D+
Sbjct:  237 MGLGQLLNFLFPEHLQHPTSAGRLFVFGLYGPLDAHSRLRSGEKGLHVVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVRQVDHLLKRFP------QYTPRDIETLFAPLPRDSEGSMSFHDMQQTVLKERLRRVVCMK---ERLHPALAEPVRNRFSR------------------------------------TLTRLTVTKSDSLVNGAPSSFFLKDIGATNVESAAFVSRLLSTRAFQICQMEDGNSPELTQNARLVRPDK 461          
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: G5A5E0_PHYSP (Peptidase A1 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A5E0_PHYSP)

HSP 1 Score: 150 bits (380), Expect = 6.960e-37
Identity = 106/305 (34.75%), Postives = 154/305 (50.49%), Query Frame = 1
Query:   19 LPSGARK--REGKVDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKV-IFPEIA----GGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLEP-GQGVWDP 909
            LPSG     +   + +G+LL+F+FP+ LQHP S GRL+ FG+YGPLD+++ LRSG  G  VV+  E+ TM  + EREDIL VY      +  L++ ++EEV+ Q D  LK         Q T  ++ +L + LPRD  G +SFHD Q  ++  R  ++   K  + P +A       A+T +  SA K                     GG+  G                        AP+  F+KDVG T    A   S+LLSTRA+++  + DGN P LTQNV+L+R D+  +   +  W+P
Sbjct:  563 LPSGGANPGKSAVMGLGQLLNFMFPEHLQHPNSAGRLFVFGLYGPLDAHSRLRSGEKGLHVVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVRQVDHLLKKFP------QYTPRDIEKLFAPLPRDSDGNMSFHDMQRAVLKERLRRVVCMKERLHPALAEPVRNQFARTLTRLSAKKD--------------------GGLVNG------------------------APSSFFLKDVGATNVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLLRPDKAQKSLEREPWNP 812          
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Match: V9ENW6_PHYPR (NDK domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9ENW6_PHYPR)

HSP 1 Score: 147 bits (371), Expect = 9.370e-37
Identity = 99/295 (33.56%), Postives = 146/295 (49.49%), Query Frame = 1
Query:   52 VDVGELLDFIFPKSLQHPLSTGRLYAFGMYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLVSFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYGSSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFIKDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLE-PGQGVWDPYACLRGNN 933
            + + +LL+F+FP+ LQHP S GRL+ FG+YGPLD  + LRSG  G  +V+  E+ TM  + EREDIL VY      +  L++ ++EEV+ Q D  LK         Q T  ++  L + LPRD  G +SFHD Q  ++  R  ++   K     +   LA+   NR +                                     T TR    ++    + AP+  F+KDVG T    A   S+LLSTRA+++  + DGN P LTQNV+L+R D+  +   +  W+P    R +N
Sbjct:  239 MGLDQLLNFLFPEHLQHPTSAGRLFVFGLYGPLDEYSRLRSGEKGLHIVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVCQVDHLLKRFP------QYTPRDIETLFAPLPRDSDGNMSFHDMQQAVLKERLRRVVCMK---ERLHPALAEPVRNRFSR------------------------------------TLTRVTATKSSGLVNGAPSSFFLKDVGATNVENAALVSRLLSTRAFQICQMEDGNSPALTQNVRLVRFDKAQKFVEREPWNPNCQKRSHN 483          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.263.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT36_ECTSI1.130e-15369.23Aspartyl protease family A01A, putative n=1 Tax=Ec... [more]
A0A7S3Y154_HETAK9.520e-7344.31Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2B712_9STRA6.170e-7044.48Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4A522_9STRA1.320e-6341.16Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835ZGK5_9STRA2.780e-5638.80Putative aspartyl protease family A01A n=1 Tax=Tri... [more]
A0A7S2RFT5_9STRA1.150e-4344.08Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A3R7K4N4_9STRA8.720e-3934.02NDK domain-containing protein n=1 Tax=Phytophthora... [more]
A0A329S5P5_9STRA3.250e-3734.55NDK domain-containing protein n=1 Tax=Phytophthora... [more]
G5A5E0_PHYSP6.960e-3734.75Peptidase A1 domain-containing protein n=1 Tax=Phy... [more]
V9ENW6_PHYPR9.370e-3733.56NDK domain-containing protein n=8 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1220110..1222172 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FT36
PFAMsNDK
Model size1003
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue8.18e-131
EggNOG OGs2CN2N@1|root,2QTJA@2759|Eukaryota
Ec32 ortholog descriptionaspartyl protease family A01A, putative
Ec32 orthologEc-04_002690.1
Cds size855
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789318.2227511-UTR-P-littoralis_Contig1:1220109..12202441680789318.2227511-UTR-P-littoralis_Contig1:1220109..1220244Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1220110..1220244 +
1680789318.2622468-UTR-P-littoralis_Contig1:1222159..12221721680789318.2622468-UTR-P-littoralis_Contig1:1222159..1222172Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1222160..1222172 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789318.233559-CDS-P-littoralis_Contig1:1220244..12203641680789318.233559-CDS-P-littoralis_Contig1:1220244..1220364Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1220245..1220364 +
1680789318.2411258-CDS-P-littoralis_Contig1:1221174..12216931680789318.2411258-CDS-P-littoralis_Contig1:1221174..1221693Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1221175..1221693 +
1680789318.2501929-CDS-P-littoralis_Contig1:1221943..12221591680789318.2501929-CDS-P-littoralis_Contig1:1221943..1222159Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1221944..1222159 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.263.2prot_P-littoralis_Contig1.263.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1 1220245..1222159 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1.263.2

>prot_P-littoralis_Contig1.263.2 ID=prot_P-littoralis_Contig1.263.2|Name=mRNA_P-littoralis_Contig1.263.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=285bp
MYGPLDSNANLRSGRNGDRVVSTWEIDTMCLQFEREDILQVYISQGRALF
VLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRPEVVQLLSGLPRDQAGLV
SFHDAQNLIVAYRENQIARFKVIFPEIAGGLAKTKSNRSAAKSPPGVEYG
SSSSIDRSPTPTKGGVSAGRPGEGATTTGTRAMRRRAKFNADVAPAEMFI
KDVGFTPAGMANHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDRPLE
PGQGVWDPYACLRGNNIGGHVRSARSSTTAKRKA*
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mRNA from alignment at P-littoralis_Contig1:1220110..1222172+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1.263.2 ID=mRNA_P-littoralis_Contig1.263.2|Name=mRNA_P-littoralis_Contig1.263.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2063bp|location=Sequence derived from alignment at P-littoralis_Contig1:1220110..1222172+ (Pylaiella littoralis U1_48)
GGAAGCACCTCCGATGACCTTCCTTCAGGTGCGAGAAAGCGGGAAGGCAA GGTGGATGTGGGAGAGCTTCTTGATTTCATTTTCCCGAAGTCACTCCAGC ATCCACTGTCGACGGGCAGGCTGTACGCGTTTGGCATGTACGGCCCTCTG GACTCCAACGCCAACCTACGATCTGGACGAAATGGGGACCGAGTGGTGAG CACATGGGAAATCGACACGATGTGCCTGCAGTTCGAGCGAGAGGACATCT TGCAGGTGGATGAAATATGACAGCTATGCGTACACGCGTGTGGTTCGAGC TCTTTCTCGCGAGGCCTGGTATTCTTCACTGTGCCCTCCTGTACAGCAAG CAGTGTGCGACCCCGGCTGGTGCGCCCAACGCCATTTACGCCGAAAGTAG ACTTGGGCGTCCAGAATAAATGGGATGACCACAAAGAAAAAATACACACA GAGCGATTCCTGAAACACTCCGGAGAAAACAATGACAATAATCAACATGG ACACAATTTCCATACGACAAAAGCTTCACTTCGTCGTCGGGGACAAAAGC GGACGTACAGCGTGGCACCCACTCGAGTAAGTCTTCTCTGCCGTGAATGC CTCTGTTTGGCCATTGATTATTTTTCCTCAACGGCAGTCGTCTGCTATGG TCCAGCAGCATATTTTTGAAGTGGTCAGACCAATCGCTCGTAGAGGCATG CCAACACCTGACAAATCTACAGGAAAATTGCTGGTCAAAGCAAAGAAACT ATGCGCTTACAAGAACCATCAGAATGTGCATTTGACATGAACGCATCGGT TTGGAGCTCCCTATAGCTGCTGTACCTTCTAGGATCACGTGTACAACAGA CTTCTGTGGGTCGCTTGGGCCCGTAGAACTGCTGCTGAAAAACAACGTGT GCGTACCAGATACTCGTAGTCTAGAGGTTTAGGGGACAAAAGGAAGTTGA TGATCGAACCATTTACATGCAATAAGTTGGACATTCTCCTCGCAGCGTAT CTTACCCTTTTTTGCCCTGTTTCCATGCAATTCATTGCAATGGCTTCACG GATTCCGACCTAAAGGTCTACATATCGCAGGGGCGGGCGTTGTTCGTCCT GAATGAGGCCCAAAAGGAAGAGGTCATAGCGCAAGCGGACAGCCATCTCA AGACAGCGAAAGGCCGCGGCTACCGCCGACAAGTCACGCGACCGGAAGTG GTTCAGCTCCTGTCGGGCTTACCGAGAGACCAGGCGGGGCTGGTGAGCTT CCACGACGCGCAGAATCTCATCGTGGCCTACCGAGAAAATCAGATCGCTC GATTTAAGGTCATTTTCCCCGAAATTGCAGGTGGATTGGCCAAGACAAAA TCAAACCGTTCTGCTGCGAAATCTCCGCCAGGAGTTGAATATGGCAGCAG CAGTAGTATCGACCGGTCGCCTACGCCAACTAAGGGCGGAGTATCGGCGG GGCGTCCTGGCGAGGGCGCAACGACAACAGGCACCAGAGCCATGAGAAGA AGGGCCAAATTCAACGCCGACGTTGCTCCTGCTGAGATGTTTATCAAGGA CGTGGGTTTCACTCCCGCGGGTATGGCCAACCACGTGAGCGATGCCCCCC CCAAATATGAGCTGCTCCGACCGGTACATGGATAACTGGAACACGTTGTC GCTACAGCAGTACCTGGTGGAACCGTTGGCTAACTCAGAAAAAGTAAACT TGCCTGATCATGAACCAAAATTGGATCTTGTCTAGCTTGTGCACTGTGCC CCCGCCAAGCATCTATGCGAGAGAAATTCACTTTTAGTCTCTGCGCCCGC CGCCCCGATTCCCTCACATCTTGCCTCTATCCAGACAAGCAAGCTCCTGA GTACTCGTGCGTACAAGGTTGGCAACATAGCGGACGGCAACGACCCCGGT CTAACGCAAAACGTGAAGCTCATCCGAGAGGACAGACCCCTTGAGCCCGG TCAGGGAGTGTGGGACCCATACGCTTGCCTGCGAGGAAATAACATCGGCG GCCATGTACGGTCTGCGAGAAGCTCGACAACGGCGAAGCGTAAAGCCTGA CGCTGAATATTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1:1220110..1222172+

>mRNA_P-littoralis_Contig1.263.2 ID=mRNA_P-littoralis_Contig1.263.2|Name=mRNA_P-littoralis_Contig1.263.2|organism=Pylaiella littoralis U1_48|type=CDS|length=855bp|location=Sequence derived from alignment at P-littoralis_Contig1:1220110..1222172+ (Pylaiella littoralis U1_48)
ATGTACGGCCCTCTGGACTCCAACGCCAACCTACGATCTGGACGAAATGG
GGACCGAGTGGTGAGCACATGGGAAATCGACACGATGTGCCTGCAGTTCG
AGCGAGAGGACATCTTGCAGGTCTACATATCGCAGGGGCGGGCGTTGTTC
GTCCTGAATGAGGCCCAAAAGGAAGAGGTCATAGCGCAAGCGGACAGCCA
TCTCAAGACAGCGAAAGGCCGCGGCTACCGCCGACAAGTCACGCGACCGG
AAGTGGTTCAGCTCCTGTCGGGCTTACCGAGAGACCAGGCGGGGCTGGTG
AGCTTCCACGACGCGCAGAATCTCATCGTGGCCTACCGAGAAAATCAGAT
CGCTCGATTTAAGGTCATTTTCCCCGAAATTGCAGGTGGATTGGCCAAGA
CAAAATCAAACCGTTCTGCTGCGAAATCTCCGCCAGGAGTTGAATATGGC
AGCAGCAGTAGTATCGACCGGTCGCCTACGCCAACTAAGGGCGGAGTATC
GGCGGGGCGTCCTGGCGAGGGCGCAACGACAACAGGCACCAGAGCCATGA
GAAGAAGGGCCAAATTCAACGCCGACGTTGCTCCTGCTGAGATGTTTATC
AAGGACGTGGGTTTCACTCCCGCGGGTATGGCCAACCACACAAGCAAGCT
CCTGAGTACTCGTGCGTACAAGGTTGGCAACATAGCGGACGGCAACGACC
CCGGTCTAACGCAAAACGTGAAGCTCATCCGAGAGGACAGACCCCTTGAG
CCCGGTCAGGGAGTGTGGGACCCATACGCTTGCCTGCGAGGAAATAACAT
CGGCGGCCATGTACGGTCTGCGAGAAGCTCGACAACGGCGAAGCGTAAAG
CCTGA
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