mRNA_P-littoralis_Contig1.258.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.258.2 vs. uniprot
Match: D7FT33_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT33_ECTSI) HSP 1 Score: 384 bits (985), Expect = 1.100e-119 Identity = 229/362 (63.26%), Postives = 250/362 (69.06%), Query Frame = 1
Query: 277 MPNRITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDLDELESSVTVMEGNKHLAELYMMGNPCQSWAGFEAYVIARLPQLERLDGKEITRTDRIKAQQRLPALREEIVPLAEEVRQRKHDEKQA---------------DGERDQGGKTDGDGGKAGAGHPPAPGKADGATSSAAVDDGRSISKTKCDGDRGXXXXXXXXXELTKHTPEVRTAIYREMAEQKKEKEDRQRENLPKDRDFELEQVLCQRAE-PASENLRGLSGSAMRRNSSFVLRKPERHYCQAQARGGKGHGVAG 1314
MPN+ITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIG+M+NLHHMKELEYLNLAL KLDLTVNFVD+DELE+SV+ MEGN+HL +LYMMGNPCQSWAGFEAY IARLPQLERLDGKEITRTDRIKAQQRLPALR+EI LA+EVRQRK EK+A D E +GG D D HP AP K+DGAT D S + CDG ELTKHTPE RTAIYREMAEQK+EKE+RQ+ENLPKDR+FELEQ R PASE R S SA F + R G+G G +G
Sbjct: 1 MPNKITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGKMQNLHHMKELEYLNLALXXXXXXXXXXXXXXXXKLDLTVNFVDMDELENSVSAMEGNRHLKDLYMMGNPCQSWAGFEAYTIARLPQLERLDGKEITRTDRIKAQQRLPALRKEIPLLAQEVRQRKLAEKEAAKLESQEKHDGNNNSDNEHSRGGGVDADD------HPTAPAKSDGATDQPGHDARPSGTDKSCDG-------KGEEEELTKHTPEARTAIYREMAEQKREKEERQKENLPKDRNFELEQTRLPRWRGPASEKPRARSDSAHEAKLEFRFEETGAASSTPGGRVGRGSGSSG 349
BLAST of mRNA_P-littoralis_Contig1.258.2 vs. uniprot
Match: A0A835Z7F5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F5_9STRA) HSP 1 Score: 264 bits (675), Expect = 1.050e-76 Identity = 152/291 (52.23%), Postives = 184/291 (63.23%), Query Frame = 1
Query: 289 ITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDLDELESSVTVMEGNKHLAELYMMGNPCQS-WAGFEAYVIARLPQLERLDGKEITRTDRIKAQQRLPALREEIVPLAEEVRQRKHDEKQADGERDQGGKTDGDGGKAGAGHPPAPGKADGATSSAAVDDGRSISKTKCDGDRGXXXXXXXXXELTKHTPEVRTAIYREMAEQKKEKEDRQRENLPKDRDFELE 1158
I+++L+RRRAEHNEGLIHTLEE+SLHQEE+E I+D LG NCR LKILYLQNNII +M+NLHH+KELEYLNLALNNI+ +EGL SCE LNKLDLTVNF+DLD+L+ S+ + +L +LYMMGNP Q+ W GF AYV L QLERLDG+EITR+ RI AQQ+LPAL+ E + + +T E T HTPEVRT IYRE+AEQK+EK++RQRENLPK+RDFE E
Sbjct: 5 ISLELVRRRAEHNEGLIHTLEEISLHQEEIERINDVLGKNCRHLKILYLQNNIINKMENLHHLKELEYLNLALNNITIIEGLGSCEMLNKLDLTVNFIDLDKLQESIEHLASCPNLKDLYMMGNPAQANWEGFAAYVTGILSQLERLDGREITRSMRITAQQQLPALKAEY-------------------------------------------------------QAQKLEQTA--------------EETTPHTPEVRTQIYRELAEQKREKDERQRENLPKERDFEQE 226
BLAST of mRNA_P-littoralis_Contig1.258.2 vs. uniprot
Match: A0A7S3HTQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTQ6_9STRA) HSP 1 Score: 254 bits (650), Expect = 9.530e-72 Identity = 153/292 (52.40%), Postives = 196/292 (67.12%), Query Frame = 1
Query: 289 ITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDLDELESSVTVMEGNKHLAELYMMGNPCQ-SWAGFEAYVIARLPQLERLDGKEITRTDRIKAQQRLPALREEIVPLAEEVRQRKHDEKQADGERDQGGKTDGDGGKAGAGHPPAPGKADGATSSAAVDDGRSISKTKCDGDRGXXXXXXXXXELTKHTPEVRTAIYREMAEQKKEKEDRQRENLPKDRDFELEQ 1161
IT DL+R+RAEHNEG+I TLEE+SLHQEELESI++ LG CR+LKILYLQNNII +M+NL HMK+L YLNLALNN++K+EGL +CEFL KLDLTVNF+DLDEL+ S+ ++ +L +LYMMGNP + +W F+ YVIA+LPQL+ LDG EITR+ +I+A+Q+LPAL E+ LA VR EK+A + K PAP S +G +I D D E+T +TPE R IY+E+A+QKKEKEDR N PK R++E EQ
Sbjct: 28 ITRDLLRKRAEHNEGMISTLEEISLHQEELESINEVLGMTCRKLKILYLQNNIISKMENLFHMKDLVYLNLALNNVTKIEGLHNCEFLGKLDLTVNFIDLDELKDSIDHLQSRTNLHDLYMMGNPSEHNWPNFKHYVIAKLPQLQNLDGTEITRSMQIQARQKLPALEIELEKLASAVRT----EKRAKAIITEQAK-------------PAP-------SVTTYANGVTIE----DVDEEAEGSNDQSQEMTDNTPETRVRIYQELAQQKKEKEDRANVNAPKKRNYEKEQ 291
BLAST of mRNA_P-littoralis_Contig1.258.2 vs. uniprot
Match: A0A7S4E455_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E455_9STRA) HSP 1 Score: 239 bits (611), Expect = 1.730e-66 Identity = 120/184 (65.22%), Postives = 153/184 (83.15%), Query Frame = 1
Query: 283 NRITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDLDELESSVTVMEGNKHLAELYMMGNPCQS-WAGFEAYVIARLPQLERLDGKEITRTDRIKAQQRLPALREEIVPLAEEVRQRK 831
NR+T+ LIR+RAEHNEG+I TLEEL+LHQEEL +I+ LG CR+LKILYLQNNII ++++LHH+K+LEYLN+ALNN+SK+EGL CEFLNKLDLTVNFVD+DELESS+ + +HL +LYMMGNPC++ W GF+ YVIARLPQL+ LDG+ ITR+ +I A+Q+LP L E+ LA+E R K
Sbjct: 25 NRMTLKLIRKRAEHNEGIISTLEELTLHQEELVAIEPCLGTTCRKLKILYLQNNIISKIQHLHHLKDLEYLNMALNNVSKIEGLDKCEFLNKLDLTVNFVDVDELESSMDHLADREHLKDLYMMGNPCEANWPGFKNYVIARLPQLQFLDGEAITRSMQIIAKQQLPKLAVELRSLAQEKRDEK 208
BLAST of mRNA_P-littoralis_Contig1.258.2 vs. uniprot
Match: A0A6A3GCM2_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GCM2_9STRA) HSP 1 Score: 224 bits (572), Expect = 2.020e-63 Identity = 140/285 (49.12%), Postives = 186/285 (65.26%), Query Frame = 1
Query: 310 RRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDLDELESSVTVMEGNKHLAELYMMGNPCQS-W-AGFEAYVIARLPQLERLDGKEITRTDRIKAQQRLPALREEIVPLAEEVRQRKHDEKQADGERDQGGKTDGDGGKAGAGHPPAPGKADGATSSAAVDDGRSISKTKCDGDRGXXXXXXXXXELTKHTPEVRTAIYREMAEQKKEKEDRQRENLPKDRDFELE 1158
+RAEHNEG+I TLEE+SLHQEELE I+ +G CR+L+ILYLQNNII +M++L HMKEL YLN+ALNNI K+EGLQSCEFLNKLDLTVNFVD D LE S+ ++ +HL ELYM+GNPCQ+ W +GF +V+A LPQLE LDGKEI R+DRIKA Q ++ + A +VR +K E++ + +++ + GG+A IS+ + + + E +TP R +Y EMAEQK+E+E R+REN PK+R+ E E
Sbjct: 1 KRAEHNEGIISTLEEISLHQEELEKIE-VIGTLCRKLRILYLQNNIIDKMEDLTHMKELRYLNVALNNIRKIEGLQSCEFLNKLDLTVNFVDFDTLEESIDHLKPLRHLRELYMLGNPCQANWESGFREFVVASLPQLEILDGKEIHRSDRIKALQVFRDRQKFVRSEARKVRAKKELERKEENPQEEDEVLEVVGGEA-----------------------TDISEEQVEKKK---KSVMASTEKVPYTPHTRREMYLEMAEQKEEEEARRRENQPKERNTEAE 258
BLAST of mRNA_P-littoralis_Contig1.258.2 vs. uniprot
Match: A0A662WUB0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUB0_9STRA) HSP 1 Score: 230 bits (587), Expect = 6.030e-63 Identity = 152/307 (49.51%), Postives = 190/307 (61.89%), Query Frame = 1
Query: 277 MPNRITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDLDELESSVTVMEGNKHLAELYMMGNPCQS-W-AGFEAYVIARLPQLERLDGKEITRTDRIKAQQRLPALREEIVPLAEEVRQRKHD-----------EKQADGERDQGGKTDGDGGKAGAGHPPAPGKADGATSSAAVDDGRSISKTKCDGDRGXXXXXXXXXELTKHTPEVRTAIYREMAEQKKEKEDRQRENLPKDRDFELE 1158
MP RIT++L+R+RAEHNEG+I TLEE+SLHQEELE I+ +G CR+L+ILYLQNNII +M++L HMKEL YLNLALNNISK+EGLQ CEFLNKLDLTVNFVD D LE S+ ++ +HL ELYM+GNPCQS W GF YVIA LPQL+ LDGKEI R+DRIKA Q ++ + A++V RK E +A E G TD SS V + + + E +TP R +Y EMAEQK+E+E R+REN P++R+ E E
Sbjct: 1 MP-RITVELLRKRAEHNEGIISTLEEISLHQEELEKIE-VIGTLCRKLQILYLQNNIIEKMEDLTHMKELRYLNLALNNISKIEGLQCCEFLNKLDLTVNFVDFDTLEDSIDHLKPLQHLRELYMLGNPCQSDWETGFREYVIASLPQLQLLDGKEIQRSDRIKALQVFRVRQQYVRKEAKKVLDRKXXXXXXXXXXXXXEDEAI-EIVSGEATD--------------------ISSVEV-----VEEVDSQHSKNKKKSVMASKEKVPYTPHTRREMYMEMAEQKEEEEARRRENQPRERNTEAE 279
BLAST of mRNA_P-littoralis_Contig1.258.2 vs. uniprot
Match: W7TJA0_9STRA (Leucine-rich repeat containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJA0_9STRA) HSP 1 Score: 215 bits (548), Expect = 2.310e-57 Identity = 141/319 (44.20%), Postives = 176/319 (55.17%), Query Frame = 1
Query: 277 MPNRITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDLDELESSVTVMEGNKHLAELYMMGNPCQSWAGFEA---------------------YVIARLPQLERLDGKEITRTDRIKAQQRLPALREEIVPLAEEVRQRKHDEKQADGERDQGGKTDGDGGKAGAGHPPAPGKADGATSSAAVDDGRSISKTKCDGDRGXXXXXXXXXEL-TKHTPEVRTAIYREMAEQKKEKEDRQRENLPKDRDFELEQVL 1167
MP IT DL+R+RAEHNEG++ TLEEL+LHQEELE I+D LG CR +KILYLQNN++ ++NLHH+K LEYLN+ALNNIS VEGL SCEFL KLDLTVNF+D D LE+S+T + +HL +LY +GNP Q+ FE Y+ RLPQL+ LDG+EITRT R+ A + P L + LA R K GKA ++I T+ G + T H PE R AIY E+A QKKEK +RQR + PK RD EQ +
Sbjct: 1 MPE-ITRDLLRKRAEHNEGILTTLEELALHQEELEGINDILGKTCREIKILYLQNNLLPRIENLHHLKCLEYLNVALNNISVVEGLGSCEFLRKLDLTVNFIDFDALEASITHLASLRHLRDLYFLGNPAQTRPWFEDEEVKCEAVVDKMLDKKQAFTYYIAHRLPQLQCLDGQEITRTTRLLAARVFPTLETRLRVLATRTRCEKE------------------------------GKAK-----------KAIKDTESCASSGPVENDGTDGSMPTSHDPETRRAIYLEIAAQKKEKLERQRADGPKKRDTAREQAV 277
BLAST of mRNA_P-littoralis_Contig1.258.2 vs. uniprot
Match: A0A7S1GCM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCM5_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.280e-55 Identity = 99/174 (56.90%), Postives = 135/174 (77.59%), Query Frame = 1
Query: 289 ITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDLDELESSVTVMEGNKHLAELYMMGNPCQSWAGFEAYVIARLPQLERLDGKEITRTDRIKAQQRLPALREEIVPLA 810
+T DL+RR+AEHN+G++ LEE+SLHQ ELE++ DTL +L+ILYLQNNI+ + L +++L Y+NLALNNI+++EGL +CEFL+KLDLTVNFVD+ LE+SV + HL EL+M+GNPC W G AYV A LPQL++LDGK+IT+T+RI A+Q+LP L +E+ LA
Sbjct: 24 LTEDLLRRKAEHNDGVLGDLEEVSLHQLELENVGDTLSRCTPKLRILYLQNNILSAISGLERLRDLRYVNLALNNITRIEGLGACEFLDKLDLTVNFVDVHALEASVAHLAPLSHLRELHMVGNPCMDWPGARAYVAASLPQLQQLDGKDITKTERILARQKLPGLVDELRRLA 197
BLAST of mRNA_P-littoralis_Contig1.258.2 vs. uniprot
Match: A0A0W8CVE5_PHYNI (Serine carboxypeptidase 49 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CVE5_PHYNI) HSP 1 Score: 204 bits (519), Expect = 5.360e-55 Identity = 137/300 (45.67%), Postives = 178/300 (59.33%), Query Frame = 1
Query: 277 MPNRITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDLDELESSVTVMEGNKHLAELYMMGNPCQS-W-AGFEAYVIARLPQLERLDGKEITRTDRIKA----QQRLPALREEIVPLAEEVRQRKHDEKQADGERDQGGKTDGDGGKAGAGHPPAPGKADGATSSAAVDDGRSISKTKCDGDRGXXXXXXXXXELTKHTPEVRTAIYREMAEQKKEKEDRQRENLPKDRDFELE 1158
MP RIT++L+R+RAEHNEG+I TLEE+SLHQEELE I+ +G CR+L+ILYLQNNII +++L HMKEL Y SCEFLNKLDLTVNFVD D LE S+ ++ +HL ELYM+GNPCQS W GF YVIA LPQLE LDGKEI R+DRIKA Q+R +R+E + + ++ Q++ +++ + GGKA IS+ K E +TP R +Y EMAEQK+E+E R+REN P++R+ E E
Sbjct: 1 MP-RITVELLRKRAEHNEGMISTLEEISLHQEELEKIE-VIGTLCRKLRILYLQNNIIEMIEDLTHMKELRYXXXXXXXXXXXXXXHSCEFLNKLDLTVNFVDFDTLEKSIDHLKPLQHLRELYMLGNPCQSNWETGFREYVIASLPQLEILDGKEIHRSDRIKALQVFQERQQYVRQEAIAVRDKKAQQQAEDEAV---------IEVVGGKA-----------------------TDISEKKS---------VMSSTEKVPYTPHTRREMYLEMAEQKEEEEARRRENQPRERNAEAE 257
BLAST of mRNA_P-littoralis_Contig1.258.2 vs. uniprot
Match: A0A024GMQ1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMQ1_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.150e-54 Identity = 107/163 (65.64%), Postives = 130/163 (79.75%), Query Frame = 1
Query: 289 ITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDLDELESSVTVMEGNKHLAELYMMGNPCQS-WA-GFEAYVIARLPQLERLDGKEITRTDRIKAQQ 771
IT +L+R+RAEHNEG++ TLEE+SLHQEE+E ID +G CR+L+I+YLQNNII EM+NL H+K+L YLNLALNNI +++GL SCEFL KLDLTVNF+D D L+ SV ++ HL ELYM+GNPCQS W GF YVIA LPQL LDGKEI R+DRI A Q
Sbjct: 4 ITPELLRKRAEHNEGMLSTLEEISLHQEEIEKID-LIGTLCRKLRIVYLQNNIISEMENLIHLKDLRYLNLALNNIKQIKGLHSCEFLEKLDLTVNFIDFDSLQQSVEHLKPLGHLKELYMLGNPCQSNWPDGFREYVIASLPQLCFLDGKEIERSDRIIANQ 165 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.258.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.258.2 >prot_P-littoralis_Contig1.258.2 ID=prot_P-littoralis_Contig1.258.2|Name=mRNA_P-littoralis_Contig1.258.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=360bp MPNRITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKIback to top mRNA from alignment at P-littoralis_Contig1:1177405..1185740+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.258.2 ID=mRNA_P-littoralis_Contig1.258.2|Name=mRNA_P-littoralis_Contig1.258.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8336bp|location=Sequence derived from alignment at P-littoralis_Contig1:1177405..1185740+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1177405..1185740+ >mRNA_P-littoralis_Contig1.258.2 ID=mRNA_P-littoralis_Contig1.258.2|Name=mRNA_P-littoralis_Contig1.258.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1080bp|location=Sequence derived from alignment at P-littoralis_Contig1:1177405..1185740+ (Pylaiella littoralis U1_48)back to top |