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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 637 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 636 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789307.790685-CDS-P-littoralis_Contig1:935470..935551 | 1680789307.790685-CDS-P-littoralis_Contig1:935470..935551 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 935471..935551 - |
| 1680789307.8003545-CDS-P-littoralis_Contig1:936878..937106 | 1680789307.8003545-CDS-P-littoralis_Contig1:936878..937106 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 936879..937106 - |
| 1680789307.8095813-CDS-P-littoralis_Contig1:939115..939442 | 1680789307.8095813-CDS-P-littoralis_Contig1:939115..939442 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1 939116..939442 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.163.1 >prot_P-littoralis_Contig1.163.1 ID=prot_P-littoralis_Contig1.163.1|Name=mRNA_P-littoralis_Contig1.163.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=212bp
GPVLRVGNREHNILDTSGCWSTNAMMLNVLAFTSTHRKRSGRGARIKGRE
AGGRERGGAAATRTAALVCCCYLSAAYGRLAAAFTTVVVPPLPQPLVSST
HGERVLFSTQQQQQQRQQQRQQHLSRRTVLPSRRGRDGRYSSSGCSRGRT
AVASSMTDLPSMTDTTAVVDAEFSEPRQPRSARSSGSATTNETENRGGGE
RARPPQGDGAGG back to topmRNA from alignment at P-littoralis_Contig1:935471..939442- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1.163.1 ID=mRNA_P-littoralis_Contig1.163.1|Name=mRNA_P-littoralis_Contig1.163.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3972bp|location=Sequence derived from alignment at P-littoralis_Contig1:935471..939442- (Pylaiella littoralis U1_48)
GGTCCCGTTCTGCGTGTAGGCAATCGTGAGCACAATATACTCGACACGTC
GGGCTGCTGGAGCACGAACGCCATGATGCTCAATGTGCTCGCATTTACCT
CAACGCACAGGAAACGCTCTGGTCGAGGAGCAAGAATAAAAGGGAGAGAA
GCAGGAGGAAGGGAACGAGGAGGAGCAGCAGCAACAAGGACAGCAGCGTT
GGTATGTTGCTGTTACCTTTCTGCCGCGTACGGCCGCCTTGCTGCTGCCT
TCACGACTGTTGTTGTGCCGCCACTCCCGCAGCCACTAGTGTCTTCCACC
CACGGGGAGAGGGTGCTTTTTTCCACGGTGAGAGATACTATCGCTGTGAC
TGCCTGTTGAGTAAGATCATGCTCGTTGGAAATAACCCACAGGTACAAGA
ATGAGCATTCAAATCATGACACCTTGGTTCTGGCCGCTTTTCGAGGCATC
GAAAACTCCACTCATGCTTCATCATCCCCTTCTGCTTTGTACAAGTACTT
CGCTGACTTCATCAGCACTCTATATGCAGTATCCACGACGTCTCTTGTTG
AGTCGACGATTGCTTGAACCTAGTTTAGCCACTGCACATGTGTCGGCATC
GTTGCCGTACCCAGAGGTACCTTGTACTCGTACGATGCTTGCGGGCATCC
CCTTCCTCCTGTATATGCTTCGTGATGTAGCGGGCGTTTCAAAGATATCA
TATCGGTTTTATATATAACACCTGATGAAATTAGAAATTAGTCTTTCAGC
AGCAACAGCCGGCGAGGCTCAGAGGCTGACCAACGAAAGACATTTACTTC
GTATTTATGTTTGTGTATCTTGGCATGTGGAAACCCTAGGAGTCCGATAC
GTAAGGTAATACGGAGCACTCGAAGTATGAAGCACCGGGTAGATCTAACA
AATAATCAAATATCCATGCACCAAAAAGGATCGGCATACAGCAGTACACA
AGTACATGTGTGATGAAGCCCCGTATCTTGTGAATGAGTCAGCCAGAGGA
GTATTCCACCATCAGCCACTTTCCCCCTCCCCAAAAATTTCGTTTCGGAG
GCACATTTATGTACTGCTGTATACGGGAGCCGGGTTGGCGTGTGACCTAA
TGGCGTCGCAAGGGCCTGTTTTAACGGAAAATGTGACACCCGGATTGGAA
AGCTAATTGGAATTGGAATTGCTTCTTATTGGTCAATCAACTTTTGCATT
CTGCGGGGCTAGCTTTCGCATCCCACGGGGCTACAGTAGCTTTTTCCTCG
AAACAAATCAACCTCTCGAGAGCTTGATTTTTGGAATCCGACGAATCTGA
ATTGGAATGGCCAAGGGAGTTGGTGCGAGAAACGAAAGGCGGCGGATGAA
GTGGCAACAAGTTTCCGTGTACAGCAGTACAGCACAGCACTAGTAGTGTT
TTCAACCACAAGAGAGGTACGCACGTAGCTAGCAACCACAAGAGGTACGC
ACGTAGCTAGCAGCAAGCAGCTGTGCTGCTACCGGGGGCAGGCCTGTGAG
GCGCACTCACACACCCACACTCACACCCACAGCAGCAGTACACACCCACA
CGCGTACATACACACACGTCTGGTACGTGCCGATGGCTGACATGAACCGT
GAACAGCTGGCAGCAGACAATGCTCCGTCTGCTAAGCACGGCGCCTACCG
CGGCTTGTCGGCGGACGCTAGAGAATACGTGCGCATGGATGCGTTCTACA
GATAGAAGCAGATAGAAGCAGTACATTTTTTGTGTAGTTGGCGCTGGCGT
TCAACCGCCTGTCAGCCTGCAGCCTGTTAACCGCAGTTGCTTCGTTGGGG
GTTTGCATGTATATCGCATCTTTGGAGCGCAGACCACTACAACGCTCCAT
CCAACCCGGGTGTCACATTTTTCGTTAAAACGACATTGTTCTTTTTCCTA
TAAAAGCTAATAGGGTCCAATTCAGGCCTCCAATCCGGGTGTCATATTTT
CCGTTAAAACAGGCCCTAACTCGTGCATGTTTGGAGCTACTGCCGTCGAT
GCTTTAATGTAGCGCCGGGTGCTTGTGCTTGCACTGCCGGTGCCCCCCGC
TGACGTTGTGAGCAGACGGGAAAAGGCATCGCTCCCTCGAGGCGCGTGTG
ATAACCTCCTCTCGTGCGGAACGCCTGTCCAATTCCATCAGCAACTCCCA
ACCAAGACCCCCCTCCTCCGACCGTGCTCCTTTATTCATCCATCTCTCTC
TTCTTGTTCTTTTCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCT
CTCTTCTCTTCTCTCGCTTGTGTCTATTCTCTCTTCCTTTCTTCTCTCCC
CCCAACCCGGAAAACGAAAAACCTCGTTACCCGCAGCAGCAGCAGCAGCA
GCAGCGGCAGCAGCAGCGGCAGCAGCACTTATCGCGACGAACCGTGTTGC
CCTCTCGAAGGGGACGAGACGGTCGCTACAGCAGTAGCGGCTGCAGCCGC
GGCAGGACCGCCGTGGCGTCTAGCATGACGGACCTGCCGTCCATGACGGA
CACCACAGCGGTGGTGGACGCCGAGTTCAGCGAGCCGCGGCAGCCGCGGT
CGGCAAGAAGTAGCGTGAGTGGTCAAAATCAACACTTTTTTGTACCACAG
CAGTAATACAGGGCACCGCTCGCGTGCGCGCGTGCAACACACGCGCACAC
ACACGCACACACACACGCACACACACACGCACACACGCTATGTATTGCTA
TTGCCAGCTCAGCAACGGTCCGGCGAGAAGGAGAGATAGTATCGTAGTGG
TTGACAGCGACAACGTAGAGGTCGTTTGGTAGTGATACCTTCTTCGTTAC
TGCCGTACAGCAGGGTAATCGAGGTTTGAAACTCGCTTCGGGGGGGGGTG
GAAGGGTGGGGCAGCAGAGGATACTACGGGACCCCGTACAGCAGTGAAAT
ACTGAATGTTGGATCTGTCGCACGGGTTTAAATGGCACGAAACACGGATT
TCGTGAAGAAAGTGCGGAGAGAGAACGTTGGGCAGTGGCGGCTCGGCCAA
AGAAAAAGTTTTTGTGCGCCTCTGACCGGCGTTCCTGTACAGTAAAATAT
CCAAAAAGAAGAAGCGAGGCCCAAGGGTTGAGGTTACTGCGGGCGGCGAT
ACAGTAGGGCCGATGGAAAACATACAGTTTTTCGTGTATACGTATATATT
TGTACTTTGAAGTGGAAACTACAGGAAAGGATTCGCGAAGGCACTAGTAA
TAGAAAAACATGACAGCTCAGTCGATCTGGCCACACTTCCCCCCGAGTAT
TCCCGCTCGGAGAACTTCTTCTTAATTTCCTGTACATCTAAGTCACAAGG
ACATCATTGATATGGTAGCACGGAGCACGACGTTTGTGAATCGAACGGAG
TACGACGTTTGTCAATCAAAATCAGTCGTCTCTTGTACAGTGAAGCGATG
CGAACGGGTCGAGAATGTTTATGATATACACACTTCAATCAACATCGCCA
ATGTTTCCTCTTTCCAAATTTTTGTTGTCTACTTCGATTTATTCTATTTA
ACTACGCTCATACTTGCCAGCTCAACATCGTATGACATGCATCTTTCTAT
CACTGTCACGAAATACAGCGAACCTGAACCACATCGCTCGCACACCTACT
CCCCTCCCTTCCCGTGCGAAGGTGCGGGTACCACCGCCGTGCCGCACATG
TACGTTTTTCATACAAAACTTAAAAAATCAAGGCACAGCAGCAAGCAGCG
TAAATATACTCTTCACAGGCCGAGATGAACATCATACATAACCGAAACTC
AAAATAAACGCCTCCCCACCGCCGCACAGCCCCCCCCCCCCCCCACGCCC
CACCCCCGAAACCCCTCCCACTCCCCTCCCGCTCCCCTCACCACACCCAC
CCACCCACCCACCACACCGCATCCCACCCACCCCAAATAAGGGTTCCGCA
ACAACAAACGAAACAGAGAACCGAGGGGGGGGAGAGCGCGCACGTCCACC
GCAAGGCGATGGCGCAGGAGGC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1:935471..939442- >mRNA_P-littoralis_Contig1.163.1 ID=mRNA_P-littoralis_Contig1.163.1|Name=mRNA_P-littoralis_Contig1.163.1|organism=Pylaiella littoralis U1_48|type=CDS|length=636bp|location=Sequence derived from alignment at P-littoralis_Contig1:935471..939442- (Pylaiella littoralis U1_48)
GGTCCCGTTCTGCGTGTAGGCAATCGTGAGCACAATATACTCGACACGTC
GGGCTGCTGGAGCACGAACGCCATGATGCTCAATGTGCTCGCATTTACCT
CAACGCACAGGAAACGCTCTGGTCGAGGAGCAAGAATAAAAGGGAGAGAA
GCAGGAGGAAGGGAACGAGGAGGAGCAGCAGCAACAAGGACAGCAGCGTT
GGTATGTTGCTGTTACCTTTCTGCCGCGTACGGCCGCCTTGCTGCTGCCT
TCACGACTGTTGTTGTGCCGCCACTCCCGCAGCCACTAGTGTCTTCCACC
CACGGGGAGAGGGTGCTTTTTTCCACGCAGCAGCAGCAGCAGCAGCGGCA
GCAGCAGCGGCAGCAGCACTTATCGCGACGAACCGTGTTGCCCTCTCGAA
GGGGACGAGACGGTCGCTACAGCAGTAGCGGCTGCAGCCGCGGCAGGACC
GCCGTGGCGTCTAGCATGACGGACCTGCCGTCCATGACGGACACCACAGC
GGTGGTGGACGCCGAGTTCAGCGAGCCGCGGCAGCCGCGGTCGGCAAGAA
GTAGCGGTTCCGCAACAACAAACGAAACAGAGAACCGAGGGGGGGGAGAG
CGCGCACGTCCACCGCAAGGCGATGGCGCAGGAGGC back to top
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