mRNA_P-littoralis_Contig1.212.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig1.212.4
Unique Name	mRNA_P-littoralis_Contig1.212.4
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig1.212.4 vs. uniprot
Match: A0A6H5KRS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS6_9PHAE)

HSP 1 Score: 592 bits (1527), Expect = 3.010e-196
Identity = 377/686 (54.96%), Postives = 423/686 (61.66%), Query Frame = 2

Query:  461 PTRHLSSYNVPLSSFLDEASCAARRATLPLLVRKHRPAELRFKNMIRGGELSDALLSLEKNIDQVRKDLRVLHLGLATGGPRPYQDPRSHHWCMLRLRRLLGPAPTT----SGGTAQGEAEGAVETELAGLTKEILGAATAAAIMPHLIGRDGLEEEEEVVENGACAGGQAFRSRAAAVTQGRPTGGLKAYWPRLSELRLSCGILGGDLERLSGCFGSFPNLRVLDLRGHAFRPPTTNLSAFAEGLQVHTSSASPRNPAFRPGRLTTLSLTNFKVEGVAGVATLGKALSAERFPRLAALSIDSCRLADRQLCALAETLPGMSGTLKSLSLRSNYALSAEGVEALANALRTGSGSGSQPGCCRCCSAATLATESRFSPTPSSSYCGSVPGGIRSDAMAVASTTATMQKPA--PPVGDTAVAAESATALASAACFTKGGSARAPAASTSTTTAT-EYSLPERAPAWSVPSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADADDCGDDVALTNRPRLMLESLDLSYSCWWSRPKRTARTGRERSA----GPFASLLNVLREGGACPYLRSLHLEGCYLGDTAVGRLVAALESESGSCRALRVLNVNGNLFGEVGVKLFADAFMRGKMPPHLHMVVFCSNAKPSYRKLHASMSLKDMNETIGLWAEHQEGVH 2485
            PT+HLSS+N   SSFLDEASC  R  +LPLLVR+HRPAE+RFKNM+RGGE SDAL SLE NIDQVRK L VL  GL  GGPRPYQDPRSHHWCMLRLRRLLGP P      +GG ++ E EGAV+TELA LT E++G A AA ++P LI   GL  EEE    GA     A   R AA   G    GLKAYWP L EL LSCGI+ GDLE LS C GS P L VL L GH++R P T L AFA  L  H S+ASP  P  RP RL TLSL +F VEGV GVATLG+ LSAERFPRLA+LSIDSCRL D+QLCALA  LPGMS TLK+LS RSNYALS+ GV ALA ALR                A   AT+                GG        ++T AT  KP   P  G                C   G SA A A +T     T E  LPERAPAWSVPS S XXXXXXXX                                           + A      L +ESLDLSYSCWW+RP+R ARTG E SA    GPFA LL +L EG ACP LRSL LEGCYLGD +VG+LVAAL +ESGSCR LR LNVNGNLF ++GV LFADAF  GKMPP L M VFC NA+PSYR+L + M+ +DM ET+ LW+EHQ  +H
Sbjct:    3 PTQHLSSFNSSFSSFLDEASCITRHNSLPLLVREHRPAEIRFKNMVRGGEFSDALRSLELNIDQVRKSLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPGPLAEVGDAGGGSEDEEEGAVDTELAQLTVELMGPANAATLVPQLI--HGLTGEEE----GAGETPSAEEVRPAAAKLGAKVRGLKAYWPCLRELTLSCGIMRGDLEDLSACLGSLPALEVLVLAGHSYRAPQTTLVAFARAL--HESAASPAAP-IRPRRLRTLSLKHFTVEGVEGVATLGEVLSAERFPRLASLSIDSCRLGDKQLCALAAMLPGMSRTLKTLSFRSNYALSSVGVSALAEALR----------------APATATD----------------GG--------SATAATPTKPGFFPTTG----------------CLL-GRSASAGATTTGAGAPTAEKPLPERAPAWSVPSSSXXXXXXXXXTNCPRPTAAAA--------------------------------EAASAAPAHLTIESLDLSYSCWWNRPERAARTGSESSAKGGSGPFAGLLKILGEGVACPSLRSLRLEGCYLGDASVGQLVAALLNESGSCRKLRELNVNGNLFSKIGVGLFADAFFAGKMPPRLRMFVFCLNAEPSYRELRSDMAPEDMRETVELWSEHQNDLH 590

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BLAST of mRNA_P-littoralis_Contig1.212.4 vs. uniprot
Match: D8LI43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI43_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.530e-115
Identity = 203/312 (65.06%), Postives = 228/312 (73.08%), Query Frame = 2

Query:  176 MRSLSPDVVEYVLQWLDLASHLRLREASLFDRDETPRRTRALAVRDCEQARRCQEKIFTPDTNTCLHSITLDIAAPNGSRSSHRGGSSNGNVMPPPTRHLSSYNVPLSSFLDEASCAARRATLPLLVRKHRPAELRFKNMIRGGELSDALLSLEKNIDQVRKDLRVLHLGLATGGPRPYQDPRSHHWCMLRLRRLLGPAPTTS----GGTAQGEAEGAVETELAGLTKEILGAATAAAIMPHLIGRDGLEEEEEVVENGACAGGQAFRSRAAAVTQGRPTGGLKAYWPRLSELRLSCGILGGDLERLSGCFG 1099
            MRSLSP+VVE++LQWLDLASHLRLREAS FDRDETPRRT  LA R  EQARRCQ  IFTPD  T LHSITLD+ AP+   SS + G         PT+HLSS+N   SSFLDEASCA RR +LPLL+R+HRPAE+RFKNM+RG E S+AL SLE NIDQVR+ L VL  GL  GGPRPYQDPRSHHWCMLRLRRLLGPAP  +    GG ++ E EGAV TELA LT E++GAA AA ++PHLI   GL  EE+    GA     A   R AA T G   GGLKAYWP L EL LSCGI+ GDLE L+GC G
Sbjct:    1 MRSLSPNVVEHILQWLDLASHLRLREASTFDRDETPRRTTTLAARGSEQARRCQLVIFTPDKKTRLHSITLDVTAPSSGSSSSKCGME-------PTQHLSSFNSSFSSFLDEASCAKRRNSLPLLIREHRPAEIRFKNMVRGREFSEALRSLELNIDQVRESLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPAPLAAVGGAGGGSEDEGEGAVNTELAQLTVELIGAANAAMLVPHLI--HGLTGEEQ----GAGDTPSAEEFRPAAATLGAQVGGLKAYWPCLRELMLSCGIMRGDLEDLAGCLG 299

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1.212.4 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1.212.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KRS6_9PHAE	3.010e-196	54.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LI43_ECTSI	1.530e-115	65.06	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1	contig	P-littoralis_Contig1:1060930..1070392 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	3553
Hectar predicted targeting category	other localisation
Exons	5
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-04_003160.1
Cds size	2325

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1.212.4	prot_P-littoralis_Contig1.212.4	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig1 1061105..1069339 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789316.700466-UTR-P-littoralis_Contig1:1060929..1061104	1680789316.700466-UTR-P-littoralis_Contig1:1060929..1061104	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig1 1060930..1061104 +
1680789316.7719083-UTR-P-littoralis_Contig1:1069339..1070392	1680789316.7719083-UTR-P-littoralis_Contig1:1069339..1070392	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig1 1069340..1070392 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789316.7144206-CDS-P-littoralis_Contig1:1061104..1061134	1680789316.7144206-CDS-P-littoralis_Contig1:1061104..1061134	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 1061105..1061134 +
1680789316.7264633-CDS-P-littoralis_Contig1:1065974..1066351	1680789316.7264633-CDS-P-littoralis_Contig1:1065974..1066351	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 1065975..1066351 +
1680789316.7353425-CDS-P-littoralis_Contig1:1066648..1067167	1680789316.7353425-CDS-P-littoralis_Contig1:1066648..1067167	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 1066649..1067167 +
1680789316.7484753-CDS-P-littoralis_Contig1:1067646..1068853	1680789316.7484753-CDS-P-littoralis_Contig1:1067646..1068853	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 1067647..1068853 +
1680789316.7609665-CDS-P-littoralis_Contig1:1069147..1069339	1680789316.7609665-CDS-P-littoralis_Contig1:1069147..1069339	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 1069148..1069339 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig1:1060930..1070392+
coding sequence from alignment at P-littoralis_Contig1:1060930..1070392+

protein sequence of mRNA_P-littoralis_Contig1.212.4

>prot_P-littoralis_Contig1.212.4 ID=prot_P-littoralis_Contig1.212.4|Name=mRNA_P-littoralis_Contig1.212.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=775bp
MRSLSPDVVEYVLQWLDLASHLRLREASLFDRDETPRRTRALAVRDCEQA
RRCQEKIFTPDTNTCLHSITLDIAAPNGSRSSHRGGSSNGNVMPPPTRHL
SSYNVPLSSFLDEASCAARRATLPLLVRKHRPAELRFKNMIRGGELSDAL
LSLEKNIDQVRKDLRVLHLGLATGGPRPYQDPRSHHWCMLRLRRLLGPAP
TTSGGTAQGEAEGAVETELAGLTKEILGAATAAAIMPHLIGRDGLEEEEE
VVENGACAGGQAFRSRAAAVTQGRPTGGLKAYWPRLSELRLSCGILGGDL
ERLSGCFGSFPNLRVLDLRGHAFRPPTTNLSAFAEGLQVHTSSASPRNPA
FRPGRLTTLSLTNFKVEGVAGVATLGKALSAERFPRLAALSIDSCRLADR
QLCALAETLPGMSGTLKSLSLRSNYALSAEGVEALANALRTGSGSGSQPG
CCRCCSAATLATESRFSPTPSSSYCGSVPGGIRSDAMAVASTTATMQKPA
PPVGDTAVAAESATALASAACFTKGGSARAPAASTSTTTATEYSLPERAP
AWSVPSPSPPSPPTTTTSRPASSHSSARSCQRRPTPASATPAAPAAPAAP
ADADADDCGDDVALTNRPRLMLESLDLSYSCWWSRPKRTARTGRERSAGP
FASLLNVLREGGACPYLRSLHLEGCYLGDTAVGRLVAALESESGSCRALR
VLNVNGNLFGEVGVKLFADAFMRGKMPPHLHMVVFCSNAKPSYRKLHASM
SLKDMNETIGLWAEHQEGVHACLP*

mRNA from alignment at P-littoralis_Contig1:1060930..1070392+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig1.212.4 ID=mRNA_P-littoralis_Contig1.212.4|Name=mRNA_P-littoralis_Contig1.212.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=9463bp|location=Sequence derived from alignment at P-littoralis_Contig1:1060930..1070392+ (Pylaiella littoralis U1_48)
CCCTCCCCCCTCACCTGTGGCTGAAGTGAACAAGCCGCGTGTCCCACAAT
CGCCGAGTGTCTTCATCGAGTACTTCTCTACGGAGTATTTAGGTACGCTG
ACAGCGTCTCGTCGACAGTTGTCCGTGGGAACGTCTAGCTTTTGCTGGCC
CTTGGTCTGGCGCCCACGCGTTATCATGCGGAGTCTCTCGCCGGATGTCG
TTGAGGTATGGGATGGATATCAAATATCGTGGTATGAAATGCACGAAAGC
AGGGCGCATGTCCTGGTGTTGTTTAGGGAGAGCTGTCGTGTCCTACGCTG
CTTTGTGGTCCCGGGATGTGCTACGTAGGTCGACGTGCGGCCATAGCTCT
AGCGTCCGGGGGTAATTGTGATAGACGTGACTACCGTGTACATACATCGC
CGTGGTGTTAACTGTGCTCGTACACGGGGGTGCTGGGCATTCGAGTTTTG
AATTTTTGAAAATTGAAAAAATTATGCTATTTTTGAATAAAAAGAACTTC
GTACAACTCTGCATGTACAGCACTGAAATCTCGTCAAATATGTTCACGCG
GGTAAATTCCCCGATGGCTGAGCAGTCTAGTGTAGTCCTCGGGTAAATCG
CTTCTTGACTCATGTGCTGTTGTAAACCCCCTACCAGGTACATTTCATAC
GATCTCTCCTGTTACTTGTATTACAATGTGTACTGCTGCCTCATCCGATA
GGGGGACCCTTTCTTTTGTTTGTGATAAAGGTCAATCCTCTACCGGTATT
CCTTTACACACCACGTAGTCAGCGGCTGACCAAACGTGATGTACAAATAA
AGCATCAGGAGTAGCCCCTATCACTAACAGCTTCCGTGGTCACAGGCAAA
CTACCTACTACCCAACGCGCGTGCAAAAAACGTTAAAACTTGTAATGTGC
GTGTTCTACGTATGTATCCCATTTATTCTGGGCACCAATCTACACCTTTG
GGTATGAAGTGGGTGCACCAGCCGGGGTCACAGAGACGGAAGGTCACAAG
GGAGTCTGTTGTTTTTCCTACACCCACGCCCTCCGGTGCTTTTATTGTTT
GGAGTGTGTGTGGTGTGTGTTCGTCTCATTAATTCTGGAAACCGGTGTTC
AGTTGGTTATCCACGCACCCTTCTGACATTCATGCGTGAGTTCGACTCCC
AGTGCAGTAACACGATCTGGGTTTTTTCTCACATTGCGCGTGAAAGTGGA
AAAGGATAAATTCGTGAGTAAAACAAAATTCGATCGTACCATCGACGAGG
GAAAGGGATTGCTGTCGTCCCCTTTCTCGCGATAAAAACTCAACCAAAAA
CAAGGCGAGCACCGCAGAGGGAAGTGGAGAAAAAAGAAAAAAAACTTCTG
TGTTGACATCCCCCTGTGTGATCCCGGTTGGAGCGTCTACCTACCCGCAA
AGGTGTAGAGTGGTGTCCAATTAAAGGGATGACAACACACACATTGCCAA
AAGAGGAGTGGCCAAAAACGGGTATACCCGATGCTTTCATGGCCATTATC
GGGTACCTGGTTAGCTCGGTGACCAAAACCGCCCCAGAACGCCATCTCAT
TGGTCAGAACCCTCCGCCACCCGGCGATGGCCACATTCCCGCCGGGTATG
CCCGATTTTGGCTATTCAACCCGCGGAGGGTACCCGAATCTCTCATACCC
TACCCGAAAATGGCCACTAATACACGGGCTCTTCGACCAACGAACCACAC
ACAGAGAGCACAAACGCCAACACTAAGGTCCACCACCGCTACCGACCGCA
GCCAGGATCACCAGGGATTATTCTCATTATTTATCATGCCATCACCCAAA
AAGATGCAACATTCAAGATCGAAAACAAGACAATCATCAAAATAATACCA
GAGAAATAATTCGTAGCACCGCTGTATGCAGCAGTGCACAGCAGACACCG
CAGCCAGGATCACCAGGGATTATCCTCATTATTTATCAGGTCATCACCCA
AAAAGATGCAACATTCGAGATCGAAAACAAGACAATCAATCATCAAAATA
ATAGAGAAATAATTCGTTGCACCGCTGTATGCAGCAGTGCACAGACAGCA
GTGTGTACCGTAGCAGCTCAACACGATCAGCGGCGGGAAGCGGGGGTCGA
AATGGAGGGCACAGAAAAAGCTCACTCTCATTGTTTTGTTGTtttggTTT
GTTGTTTTGGTTTGGGTCGTTAAGAGAAAGAGAAAATAATGTGGCTTTCT
TGAGCGCATATCTTGCCTTCCTTGTAGAAGGTACTGCTGCACACGCAACC
GAAGAGCAACTACTGCTTGCTGCACACGCGACCGAAGAACAACACAAGTA
GAGTCAACGCGGGCACTAGCTCTCGATCGTCGCACATTGGAGACTGGATA
CACAGCTCAAAGTTGTTCCCGCCCAACCAACGCTCGATTTCCGCTCAATG
GATTGTGAGAAATTGGTATGACATCGACGAACTAGCCGCAGGAGGACAGA
GTCTTTTTCCTTTTTTTATGTGTCTTCGTGTGTTTCGCGGATGGACTCTT
GCTTCCTAACTCGTCATGATTTAGGCTGTTTTTACACGGAGTCTTGTACA
TATATATGATACGTATGAATATCTGTTGATGTCTGTTTGATTAGCTTCTT
CTACAGCTCTCCTCATTATAATCGACACGTTACAATCCACGTATGTATCT
CTATTTCATCGTTGTACAAATAGAAGTCTCCACGAACAATAATGGGAGAG
AACACACACCAACCACATATCCACACGTATCATCATATGGTAATGGTGTA
CGGGGTAGCATATCACGGTAGCATGACGTGCGTGTAAATGTGAATGACAA
GCAATTGGGAGGAAAATCCGGCCCAAAAAGACAGATTGGCCGAGACTAAA
ACATGCCGGGAATAATACCCAGCGACTGAGATTCAGCGGTCACCTGGTAT
GATATGTGCCATCATTTATTCGTGCCTGTTGTGTAATTTTAGATATTTTT
ACTCGGCCGGCAGTACCACTGCTGTTCAGGATAGTTGTACGGGTAACATT
TCATGTATTTTGGAAGGAACCACTCATAGCAGCAGTGGGAAGTATGTTCA
GATTTACACGGAGAAAATAAGAGGAGCTCCCTTCAGAGTACCACAATATA
TGTAGAGGGATACACTCGAATACGGGATGGCAGCAGCAGCAGCAGCAGCT
GTTTCGAGCAGCAGAGCAGTATTTTGTTTGCCGCCGCTGTTCTTGCTCGA
GGTAAACGAGCGGCTGTCATGGCATATGGGCGAAGAACCGGCCCACGGCA
GTTCGCAACAACTTCGTGTCGGGGAAACACTGCTGCAGGGTGAGGTAATC
ATTGCTCATGATTATTCTCACTACTGCTGTCTGTGCACTGCTGCATACAG
CGGTGCTACGAATTATTTATCTGGTATTATTTTGATGATTGTCTTGTTTT
CGATCTTGAATGTTGCATCTTTTTGGGTGATGGCATGATAAATAATGAGG
ATAATCCCTGGTGATCCTGGCTGCGGTCGGTAGCGGTGGTGGACCTTAGT
GTTGGCGTTTGTGCTCTCTGTGTGTGGTCCGTTGGTCGAAGAGCCCGTGT
ATTAGTGGCCATTTTCGGGTAGGGTATGAGAGATTCGGGTACCCTCCGCG
GGTTGAATAGCCAAAATCGGGCATACCCGGCGGGAATGTGGCCATCGCCG
GGTGGCGGAGGGTTCTGACCAATGAGATGGCGTTCTGGGGCGGTTTTGGT
CACCGAGCTAACCAGGTACCCGATAATGGCCATGAAAGCACCGGGTATAC
CCGTTTTTGGCCACTCCTCTCGCCAAAACCTTTCCTCCTGGAGTACGCGG
GGAAATCCTACAAGTAGTCACTTCGAAAGCTGCTGGAAATAAATCTGGAA
AACCGACAAACAAAACGAAACGGACCCCGAAAGATCAATCAACAGCAGTG
CCGAATATACAACGTACTTGGGTACTTCGTATCATACCTGCTGCACTGCA
GAACCGCTGTGCATACATGCTGTGGGCGAAATAGAATTAAAAATAAAGAG
GAACAGAAAAAAACAAGGAAGATGTGTGTTGTGTGTTGTGTTGGCATCCC
ATCTATTTTTCCTTGCGCGCACCAGCGGGGGGTTATACAGGAGGAAGGTC
GACACAGTCATGTTATGAATTTCATCTCATCGTATTAGATGCGCTCGACG
GGTTCTGAAATGTCGAAGTACCATTTATTTATTGCTGACGGTATCTATCA
CTCAATAACAGTAGTAGGCGACTTATGTACGCAGGAGAAACTCTCTTTGA
GACTTACTTTGTGTTGAGTGTTGAGGCTCAGTGACTTCGACGCCACCATT
AATTTATCGTAGGATTTACTGCTGTAGCGCCGGCCGCTGAGCCCCGTTTC
TTTCAAGCCCGAATATTTTATTCCAACTATTATCCTCAATAAAAGCTACT
TAGTATGGCATACCAGACGGTAATCTGTTCTCGCAGACCCTGCGAAGTAA
TCCTGAAGAGGAGGGAAAAGCACGTTACAGTATTAGTACACAGCTTGACG
GTAGACTTCTCTCCCCGATATTTTGCTGTTTGACCTGGCAGATCTACGCA
GAGGAGGTACGCGAAACTACTGTAGGTATATGATAGGTGTGTTGAATTTC
CCGGCCGGATTCTACGTAGGAAACCCTCTCTTCAAGGGATTCAAGACAAA
TGCATCCCTCTGCCATCCCTCTGCGTCAGTCAGTCCCATTTTAAGGGGGC
GTGTCTTGGTTGGTGTCACTTGTACAGATTTATTTGTTGCCAGCTGTGAG
CCTCAGTATATGTATGTTTCATTCTTACGAGCGGGTTACCGTGCATCCAC
CACGCCCCCCAACTTGTTCAATCTTCACCACTACTGCTGTGAGTAGTGCA
CCGACCGCGGATCCAAGGGGCAGACAAAAACTGCAGATTACAGCGTATAA
CAACCGATCGGTTGTGCCCATGTGTGTGCGTAGACAACCTTGCCTTCAGT
TACACTAGAATACCTTGACTTGAGCCTGCGTGACACGCGACAACTTGACC
CTGTTTCGCCCCCGCCGACCACTTTTTGCTGCCCACTCTAACCAGTACGT
CCTGCAATGGCTGGACCTCGCTTCTCACCTACGGCTGCGCGAAGCCAGCC
TCTTCGACCGCGACGAAACGCCTCGACGAACGAGGGCTCTGGCGGTAAGG
GACTGCGAGCAGGCGAGGAGGTGCCAAGAAAAAATCTTCACCCCCGACAC
AAACACCTGCCTCCACAGCATTACGCTCGACATCGCAGCGCCAAACGGCA
GCCGCAGCAGCCACAGAGGGGGCAGCAGCAACGGCAACGTCATGCCCCCC
CCGACGCGTCACTTGTCGTCCTACAATGTTCCGCTCTCCTCTTTTTTGGA
CGAAGCGAGCTGCGCGGCGCGGCGCGCTACCCTGCCCCTTCTCGTCCGCA
AGCACCGCCCGGCGGAGCTCAGGTGAACCACGGTCGTTTGCTGCCGACAA
CACGTCGGACTCCGTTGACAATCCTCTAGACCCCGCGGTGTTGAGACGGT
TCTCATATACCTGGTACATCTTACGAGGTGTATACAACGGGCAGAAGTCG
TCTCGCCATCTGCACGACACCCAAAAACTCAATTATGATGTGCCGGCTCC
TTGCATGCAGCCTTGCCCGAGGAAACCGTGTTTTTGTTTTTTTTGGCTGA
TTCTTCGCCATTCCCCGAATCCATCCATACTTGTACTATCCTCATGCCTT
CGTATCTTAATCCCCTCAGGTTCAAGAACATGATTCGCGGCGGCGAGCTG
TCGGACGCGCTACTGTCGCTCGAAAAGAACATCGATCAAGTCCGCAAGGA
CTTACGCGTTCTCCATCTAGGGCTGGCCACCGGAGGCCCCCGCCCCTACC
AAGACCCCCGCTCCCACCACTGGTGCATGCTTAGGCTGAGGCGATTGCTG
GGACCGGCGCCAACGACAAGTGGCGGCACTGCGCAGGGGGAGGCGGAGGG
TGCGGTGGAAACGGAGTTGGCCGGACTTACGAAAGAGATCCTAGGAGCCG
CCACAGCCGCTGCGATAATGCCGCACCTGATTGGGAGGGACGGGCTCGAG
GAGGAGGAAGAGGTTGTGGAGAACGGGGCCTGTGCGGGAGGTCAGGCTTT
TCGATCACGAGCAGCGGCTGTGACGCAAGGGCGTCCTACGGGAGGGCTGA
AGGCCTACTGGCCGCGCCTGAGCGAGCTCAGGCTGTCGTGTGGGATCTTG
GGCGGGGACCTGGAACGCTTGTCAGGGTGCTTTGGAAGGTATGGGCCGTT
ACACTGATGAAAAATTATACTTCGTAAGTGAGAACTGTAATTGTATGTAG
GTCGTGGTCGGGTTAGCGAGGCTTGAGCGCGAGGGAGAGGACACATTTTT
CATGTGGTACTGCCGACGTTTAAGGCGAACATCCATGGCGTAAGCGAGCA
TTCCTCTCAGGTCGGGCGTCACGCTCGCAAAAGATTCCATGAGGACGCAC
TGCTGCCGTCGTACTGCGGACATGATCTATATTCCACAGAAATCCTGTTT
GTTTCGGCGAACGAACACCGCGGATGTGAAGGAAATGCCGTCGACGTTGC
TCGACACAAAAAACTCCCTCTTGGGCTCGAAAATTAACCCCGCGCCAGCC
GACCCCACCCCCCCCCGTCCTCTCACGGAAACGAACCCTTTACACTTTTG
ACGTCTTTTCACCACCTTTGGCCCCCGCCCCCATCCATCCTCCCCCCCCC
TCCTTGGCACCCCGCAGCTTTCCTAACTTGCGCGTTCTCGATTTGCGCGG
GCACGCTTTCAGACCGCCGACGACAAATCTTTCCGCCTTTGCCGAAGGTT
TACAAGTGCACACCTCCTCTGCATCTCCGAGGAATCCTGCGTTCAGACCC
GGGCGGCTGACGACCTTGTCCCTCACCAACTTTAAGGTGGAGGGCGTGGC
GGGGGTGGCCACTCTGGGGAAGGCCCTCTCCGCGGAACGGTTCCCGCGCC
TCGCGGCGCTGTCAATCGACAGCTGTCGCCTCGCCGACCGGCAGCTCTGC
GCCCTCGCCGAGACGCTCCCGGGCATGAGCGGCACGCTCAAGTCTCTCAG
TCTCCGGAGCAACTACGCGCTGTCCGCCGAGGGCGTCGAGGCGCTTGCCA
ATGCTCTCCGGACGGGCTCTGGCTCTGGCTCGCAACCTGGCTGCTGCCGC
TGCTGCTCCGCAGCTACTTTGGCGACCGAAAGTCGTTTTTCCCCGACGCC
GTCTAGCAGTTACTGCGGCTCTGTCCCTGGCGGCATCCGCTCTGATGCGA
TGGCGGTAGCGTCAACGACGGCGACGATGCAGAAGCCTGCCCCTCCAGTT
GGTGACACAGCAGTGGCTGCGGAGTCGGCCACAGCGCTGGCGTCGGCGGC
GTGCTTCACCAAGGGTGGCTCAGCCCGTGCTCCTGCTGCATCTACTAGTA
CGACGACGGCCACGGAGTATTCGCTACCGGAAAGAGCGCCGGCTTGGTCT
GTTCCTTCTCCATCGCCGCCGTCGCCGCCAACGACGACGACATCTCGGCC
CGCCTCGTCGCATTCTTCGGCTCGCAGTTGCCAACGACGACCAACCCCTG
CAAGTGCAACTCCTGCTGCTCCTGCTGCTCCTGCTGCTCCTGCTGATGCT
GATGCCGACGATTGCGGTGATGACGTCGCGTTGACGAATCGACCGCGCCT
TATGCTCGAGTCGCTGGACCTGTCGTACAGCTGCTGGTGGAGCCGACCGA
AGCGCACGGCGCGTACGGGGCGGGAGCGTTCGGCCGGCCCGTTCGCAAGC
TTGCTGAACGTCCTCCGAGAGGGAGGCGCCTGCCCTTATCTCAGGAGCCT
GCACCTGGAGGGTTGCTACTTGGGGGACACTGCGGTGGGGCGGCTGGTCG
CGGCGCTAGAGAGCGAAAGCGGCAGCTGCCGTGCGCTGAGGGTGTTGAAC
GTCAACGGGAACCTTTTCGGCGAGGTGTGAGCGAGTGTGACCATCGTTAT
GATGCTCTTGTATCTGATTATTTTATGCGCTGGCCCTTCGCATCCTGTCC
CAATTAATTCCGACGTGTGTGTATTGTGTGTGTGTGTTTGCGCGTTAAGT
GCAACCCCCCCCCCCCACCCCAACCTCGCTACCCCGGCCTCCTGCGGGTC
CACCGACCTTTCGCGAACTAACGTCCGTTTCTATTCTTGTTCTGTGTTTT
TATTAATTTTTTCCTGTTTCTTGTGATGTCACGATCATAACCGATTTGCT
GGGACACAACCAACACAGGTCGGAGTGAAACTCTTCGCCGACGCTTTCAT
GCGCGGAAAGATGCCGCCGCACTTGCACATGGTCGTTTTCTGCTCCAACG
CTAAGCCCTCCTATCGGAAGCTCCACGCCAGCATGTCGCTCAAGGACATG
AACGAGACCATCGGGTTGTGGGCAGAGCACCAAGAGGGCGTGCACGCGTG
TTTACCATGATGGATACCGGCGCGACTCTGGTGGGGTGTGTGTACAAGTA
TGTACTACGCGGTATTGTTCGTGACGTGCGTAAGAGAGCGAGGTTTTCGG
CAGACAGAAGGAAGATTGAAGGAGATAGGGGGGTCCAACGTACGGTCAGT
GTGTTGTATCTCCTTATTTCTTATTTCCGGGGCACGCATGTTATAACGTA
TTTTAGGTTTTGGCGTAAGTGTTGTGGGTTGGGACACGGCGGCCTCGCCC
GTAAAAAAGCGTATTGGAACAGGCTAGCAGTAGTTGGAATGCGTGGTCGA
CTTTTTTTGTTGAACGCAGTTTCAAGAGGATTTTTTTTGTTTTTCATTTC
CTTATTTCCGTGGCACGCATTTGAAACAAACGTATTTTAAGGTTTCTGGC
GTAGGTGTTGTGGGTTGGGACATGGTGGCCTCGCCGGTAAAAGGCCGTAT
TGGAACAGGCTGGCTGTGTGGTAGACTCTTTTTTTCGATGGAGGTTTAAA
GAGGATTTTGTTGATTATTTCTTGAAATATTTCCTTTTTTCCGGGACACG
CATGAAGTGTATTTGAGGTTTTAGCGTAGGTGTTGTGGGTTGGGATATGG
TCGCCTTCTGGTGAAAACCCGTACTGGAACAGAGAGGCTGGCATGCAGTA
TGGATGTGTGTGGTCGACTTTTTTTGTTGTTGAAGGGAGGTGCAGACGGA
TTTTTGTTGATTTTTTTTTCGCATTTCCTTATTATTTCCGGGGCACACAT
GAAATATGTAATTAATGTGTTGACGTTAGTGTTGTGGGTTTGGATATGGT
CGCCTCGCCGGTGAAAACATGTATTGGAACAGGCTGGCAGTATGAGGGAT
GTGTGGTCGACTAATTTGTTGAATGGAGTTTCAAGAGGAATTTGATGTCT
TTTTGAGCGGGGGTACAATGGCCTCTACCTCGTTCTTGTACGATGTACGC
ATACTTTCGGCACTTGACACTTCTTGCCTTTACTTCTAGACTTTTTTTTC
TTCGGTTTTGATGTGTTGGTTAAAGTTGTAATTTTCAAGCACCGCACCCG
ATTTTGCTTGTCG

Coding sequence (CDS) from alignment at P-littoralis_Contig1:1060930..1070392+

>mRNA_P-littoralis_Contig1.212.4 ID=mRNA_P-littoralis_Contig1.212.4|Name=mRNA_P-littoralis_Contig1.212.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2325bp|location=Sequence derived from alignment at P-littoralis_Contig1:1060930..1070392+ (Pylaiella littoralis U1_48)
ATGCGGAGTCTCTCGCCGGATGTCGTTGAGTACGTCCTGCAATGGCTGGA
CCTCGCTTCTCACCTACGGCTGCGCGAAGCCAGCCTCTTCGACCGCGACG
AAACGCCTCGACGAACGAGGGCTCTGGCGGTAAGGGACTGCGAGCAGGCG
AGGAGGTGCCAAGAAAAAATCTTCACCCCCGACACAAACACCTGCCTCCA
CAGCATTACGCTCGACATCGCAGCGCCAAACGGCAGCCGCAGCAGCCACA
GAGGGGGCAGCAGCAACGGCAACGTCATGCCCCCCCCGACGCGTCACTTG
TCGTCCTACAATGTTCCGCTCTCCTCTTTTTTGGACGAAGCGAGCTGCGC
GGCGCGGCGCGCTACCCTGCCCCTTCTCGTCCGCAAGCACCGCCCGGCGG
AGCTCAGGTTCAAGAACATGATTCGCGGCGGCGAGCTGTCGGACGCGCTA
CTGTCGCTCGAAAAGAACATCGATCAAGTCCGCAAGGACTTACGCGTTCT
CCATCTAGGGCTGGCCACCGGAGGCCCCCGCCCCTACCAAGACCCCCGCT
CCCACCACTGGTGCATGCTTAGGCTGAGGCGATTGCTGGGACCGGCGCCA
ACGACAAGTGGCGGCACTGCGCAGGGGGAGGCGGAGGGTGCGGTGGAAAC
GGAGTTGGCCGGACTTACGAAAGAGATCCTAGGAGCCGCCACAGCCGCTG
CGATAATGCCGCACCTGATTGGGAGGGACGGGCTCGAGGAGGAGGAAGAG
GTTGTGGAGAACGGGGCCTGTGCGGGAGGTCAGGCTTTTCGATCACGAGC
AGCGGCTGTGACGCAAGGGCGTCCTACGGGAGGGCTGAAGGCCTACTGGC
CGCGCCTGAGCGAGCTCAGGCTGTCGTGTGGGATCTTGGGCGGGGACCTG
GAACGCTTGTCAGGGTGCTTTGGAAGCTTTCCTAACTTGCGCGTTCTCGA
TTTGCGCGGGCACGCTTTCAGACCGCCGACGACAAATCTTTCCGCCTTTG
CCGAAGGTTTACAAGTGCACACCTCCTCTGCATCTCCGAGGAATCCTGCG
TTCAGACCCGGGCGGCTGACGACCTTGTCCCTCACCAACTTTAAGGTGGA
GGGCGTGGCGGGGGTGGCCACTCTGGGGAAGGCCCTCTCCGCGGAACGGT
TCCCGCGCCTCGCGGCGCTGTCAATCGACAGCTGTCGCCTCGCCGACCGG
CAGCTCTGCGCCCTCGCCGAGACGCTCCCGGGCATGAGCGGCACGCTCAA
GTCTCTCAGTCTCCGGAGCAACTACGCGCTGTCCGCCGAGGGCGTCGAGG
CGCTTGCCAATGCTCTCCGGACGGGCTCTGGCTCTGGCTCGCAACCTGGC
TGCTGCCGCTGCTGCTCCGCAGCTACTTTGGCGACCGAAAGTCGTTTTTC
CCCGACGCCGTCTAGCAGTTACTGCGGCTCTGTCCCTGGCGGCATCCGCT
CTGATGCGATGGCGGTAGCGTCAACGACGGCGACGATGCAGAAGCCTGCC
CCTCCAGTTGGTGACACAGCAGTGGCTGCGGAGTCGGCCACAGCGCTGGC
GTCGGCGGCGTGCTTCACCAAGGGTGGCTCAGCCCGTGCTCCTGCTGCAT
CTACTAGTACGACGACGGCCACGGAGTATTCGCTACCGGAAAGAGCGCCG
GCTTGGTCTGTTCCTTCTCCATCGCCGCCGTCGCCGCCAACGACGACGAC
ATCTCGGCCCGCCTCGTCGCATTCTTCGGCTCGCAGTTGCCAACGACGAC
CAACCCCTGCAAGTGCAACTCCTGCTGCTCCTGCTGCTCCTGCTGCTCCT
GCTGATGCTGATGCCGACGATTGCGGTGATGACGTCGCGTTGACGAATCG
ACCGCGCCTTATGCTCGAGTCGCTGGACCTGTCGTACAGCTGCTGGTGGA
GCCGACCGAAGCGCACGGCGCGTACGGGGCGGGAGCGTTCGGCCGGCCCG
TTCGCAAGCTTGCTGAACGTCCTCCGAGAGGGAGGCGCCTGCCCTTATCT
CAGGAGCCTGCACCTGGAGGGTTGCTACTTGGGGGACACTGCGGTGGGGC
GGCTGGTCGCGGCGCTAGAGAGCGAAAGCGGCAGCTGCCGTGCGCTGAGG
GTGTTGAACGTCAACGGGAACCTTTTCGGCGAGGTCGGAGTGAAACTCTT
CGCCGACGCTTTCATGCGCGGAAAGATGCCGCCGCACTTGCACATGGTCG
TTTTCTGCTCCAACGCTAAGCCCTCCTATCGGAAGCTCCACGCCAGCATG
TCGCTCAAGGACATGAACGAGACCATCGGGTTGTGGGCAGAGCACCAAGA
GGGCGTGCACGCGTGTTTACCATGA