mRNA_P-littoralis_Contig1.204.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.204.3 vs. uniprot
Match: D8LI40_ECTSI (A to I editase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI40_ECTSI) HSP 1 Score: 535 bits (1378), Expect = 1.750e-173 Identity = 397/866 (45.84%), Postives = 456/866 (52.66%), Query Frame = 1
Query: 40 MLLADRIALAVIEQFDDLKPRGKPQGREWTVLAGIVAQDTRRRCCTAGADKSCSPCTCLRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWKELHLLVSSTAGQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLEPIPQPAAGAARGDNSRGGKTRGWRLKRHLRLHLYISDAPCGDASIYKQKQTRAPSDDXXXXXSRTGSGDGRQRGSDRNGGASIPDV-----------DGERNRPLDDGRGSTKRHRGAAATVVGVSGSDGGCSSRTQPSSPPPLAATKMGLNDSKAGKQEVSRARERVSAAPESMTFTGAKIIAAVKKRGAPDQSFGDGIGGXXXXXXXXXXXXXXXXGDLVLRIDREQEQQLGALRIKSSRSNISEEGRTMSMSCSDKLAKWSVLGLQGGLLAAWVEPFFLSSLVVSEDPRTDGPAPLLAALTRAIPGRAALALASSTSLALLPLRGGAKXXXXXXXXXXXXXXXLIKVFVATVTFDKSKAQSEQRVFN-EGSVACSSASLAGTTDP-KPAKAAAAVTGVAHPSTVAAASSVSAHHALQTHGLGEGKG-EMTNGDRCNAHNTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQSRRDRKPKKAVPSGTSLNWINGLGTGRGAXPGGGHATRVQAEVSLSATGRMQGAVSKGVLSLRTRSRLCRARLLEAAEHVARSHRRPRAPMCDNHDNXXXXXXXXXXXXXXXDDGDMRGWKRGGLVLGSGSXXXXXXXXXXXRSYWRLKRASAAYLASREALLSTPTFRAWLVGGGDKQRFFVDERSGVVPLAAA 2595
MLL DR+A AV+EQFD+LK RGKPQG+EWTVLAGIVAQDTR CCTA A + SPC+CLRV+SLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLW+ELHL VSS AG+ Q +LLLE PQ G WRLK ++RLHLYISDAPCGDASIY+QK+ +AP+ +R G GDG G+D +S D DGER D RG KR R A A G S PS P L E + + A + K P+ EQQ+GALRIKSSRSNISEEGRTMSMSCSDKLAKW+ LG+QGGLLA+WVEP FLSS+V+S DPRTDGPAPL +ALTRAIPGRAALA S+ GG + + VFV+ VTF +SKAQSEQRVF+ EGS CSS S G+ PAKA V+ V ++A AS + + G + G E + G R + K+SRRDRKPKK VPSGTSLNWI GLGTGRG PGGG R+QAEV+LSATGRMQGAVSKGVL+LRTRSRLCRARLLEAA VAR++ RAPMCD+H D + G + + G G+ RSYWRLK+AS AY REA+LSTPTFRAWLVGG DKQRF VDER+GVV LA A
Sbjct: 1 MLLGDRVASAVVEQFDNLKSRGKPQGKEWTVLAGIVAQDTRTECCTAVAGANSSPCSCLRVISLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWRELHLRVSSAAGRQQDVTIDERKGGGTPCNSGRSDGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGR---------ILLLERSPQATD---------AGACISWRLKPYIRLHLYISDAPCGDASIYEQKR-QAPNV-GGGGSARCGGGDG-DPGND----SSWDDAPRSTPLAGSRSDGERRGRGDADRGDAKRARCAVAIA--------GLSDAVAPSPRPDLPLD-------------------------EERSCSAASLNPLDCKPREPE------------------------------------EQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWAFLGVQGGLLASWVEPIFLSSIVISADPRTDGPAPLASALTRAIPGRAALANRRSSFDGTTGTVGGEEHLSHPPMPREEEEERMA-VFVSEVTFARSKAQSEQRVFDDEGS--CSSTSGVGSPGSITPAKAT--VSSVKASPSIADASIAAGSARQRMPGDNDRSGRETSQGTRSD-----------------------------------------NSIIGKRSRRDRKPKKVVPSGTSLNWIEGLGTGRGTGPGGGDTARIQAEVTLSATGRMQGAVSKGVLTLRTRSRLCRARLLEAANLVARAYLPQRAPMCDHH----------------YSDIEGTGEETETVQAGEGASGSEGPESGG-RSYWRLKQASRAYRVRREAMLSTPTFRAWLVGGKDKQRFAVDERTGVVLLAKA 709
BLAST of mRNA_P-littoralis_Contig1.204.3 vs. uniprot
Match: A0A6U5GYH6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5GYH6_9STRA) HSP 1 Score: 119 bits (299), Expect = 6.040e-24 Identity = 135/489 (27.61%), Postives = 194/489 (39.67%), Query Frame = 1
Query: 46 LADRIALAVIEQFD----DLK---PRGKPQ-GREWTVLAGIVAQDTRRRCCTAGADKSCSPCTCLRVVSLATGNKCVGRDKIPDD-----GSVVHDSHAEVLARRALLLRLWKELHLLVSSTAGQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLEPIPQPAAGAARGDNSRGGKTRGWRLKRHLRLHLYISDAPCGDASIYK--QKQTRAPSDDXXXXXSRTGSGDGRQRGSDRNGGASIPDVDGERNRPLDDGRGSTKRHRGAA---------ATVVGVSGSDGGCSSRTQPSSPPPLAATKMGLNDSKAGKQEVSRARERVSAAPESMTFTGAKIIAAVKKRGAPDQSFGDGIGGXXXXXXXXXXXXXXXXGDLVLRIDREQEQQLGALRIKSSRSNISEEGRTMSMSCSDKLAKWSVLGLQGGLLAAWVE-PFFLSSLVVSEDPRT 1437
L+DRIA + ++ D K RGKPQ G+EWTV A IV D + + + + + VVS ATG+KC G +I D+ G+V+HDSHAEVL RR L+L LWKE+ LLE PA ++ +N + G + + L+ L LHLYISD+PCGDASIYK + S R + D N G ++ R LD+ +R + A + G++ + + SS + T + + + K V + + ++ G K+ +SF + L + RE Q + ALR KS RSN+ E R++SMSCSDKL +WS+LGLQGGLL+ W+ P S++V DPRT
Sbjct: 4 LSDRIAQCALRHYESGMYDSKCKSNRGKPQSGKEWTVFAAIVVLDESEG--SRDPEAKTTGYSDMWVVSCATGSKCTGLSRIGDNLNVCGGTVLHDSHAEVLCRRGLVLTLWKEVE---------------------------------------EKLNREIRIGKDWKKEKETYDSTGNFFLEKNCGKKRELLETDCSPAR--SKLENDQLGPSFQFSLRPELSLHLYISDSPCGDASIYKVGTESVENESSGYMGNPERHTESRALMKLDDENDGVNLL------KRKLDENDERVERKKNLANFTGAKIVLSPATGITSENINITEEIHMSSKTNVGITSCDSSRNISPKVNVDKKLHGSTPYEDAYISNGEKVT---------KKSFCN------------------------LTLAREDTQIVSALRTKSGRSNLPEHLRSVSMSCSDKLCRWSLLGLQGGLLSRWIPFPITFKSILVGRDPRT 410
BLAST of mRNA_P-littoralis_Contig1.204.3 vs. uniprot
Match: A0A835ZEK1_9STRA (A to I editase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK1_9STRA) HSP 1 Score: 103 bits (256), Expect = 8.820e-19 Identity = 121/441 (27.44%), Postives = 160/441 (36.28%), Query Frame = 1
Query: 214 LRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWKELHLLVSSTAGQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLEPIPQPAAGAARGDNSRG-----GKTRGWRLKRHLRLHLYISDAPCGDASIYKQKQTRAPSDDXXXXXSRTGSGDGRQRGSDRNGGASIPDVDGERNRPLDDGRGSTKRHRGAAATVVGVSGSDGGCSSRTQPSSPPPLAATKM---------GLNDSKAGKQEVSRARERVSAAPESMTFTGAKIIAAVKKRGAPDQSFGDGIGGXXXXXXXXXXXXXXXXGDLVLRIDREQEQQLGALRIKSSRSNISEEGRTMSMSCSDKLAKWSVLGLQGGLLAAWVEPFFLSSLVVSEDPRTDGPAPLLAALTRAIPGRAA 1494
L V++LATG KC+G+ K+P DGS+VHDSHAEVLARR L+ L + L ++ G D+SR G +RL+R RLHLYIS+ PCGDASIY + P+ + T + + + +P P P AA+ N+S AG ++ + + E AV + G G G G L ++RE Q +G LR+KS RS++ E RT SMSCSDKLA+W+VLGLQG LL W+EP LSS+ VS D R P AA+ RAI RAA
Sbjct: 19 LAVIALATGTKCMGQSKLPPDGSIVHDSHAEVLARRCLVRLLGEHLRAALTRAGGS----------------------------------------------------------------------------------DDSRNFLESTGVEGRFRLRRGHRLHLYISEPPCGDASIYPRVADSPPAAVEAAARADTATAEAALDATQ------LPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMVPAPAAASHSVNSPTCPLKRANNSGAGDAPHAKKPKLNGDSTEGSGLPSDGATMAVTAENGDVVAGGQGGSGAHAAGAVAMAYT----GAKALTLEREVRQAVGQLRLKSGRSDLRPEDRTESMSCSDKLARWAVLGLQGRLLRRWLEPVLLSSVTVSADARA-APDAQRAAMRRAICDRAA 366
BLAST of mRNA_P-littoralis_Contig1.204.3 vs. uniprot
Match: A0A0G4FFH3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FFH3_9ALVE) HSP 1 Score: 100 bits (248), Expect = 1.380e-17 Identity = 56/107 (52.34%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 49 ADRIALAVIEQFDDLKPRGKPQGREWTVLAGIVA---QDT--RRRCCTAGADKSCSPCTC-LRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWKEL 351
AD +A VIE ++ L RGKPQG+EWT +AG+VA DT R+ + TC + VV LATG KC G D+I DGSVVHD HAEVL RRAL L LW+E+
Sbjct: 27 ADEVARKVIEAYEALGGRGKPQGQEWTCVAGVVACTCTDTGIRQEGVATSGKRGKRVATCNMEVVCLATGTKCTGLDRILPDGSVVHDCHAEVLTRRALRLHLWREV 133
BLAST of mRNA_P-littoralis_Contig1.204.3 vs. uniprot
Match: L1J7A1_GUITC (A to I editase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J7A1_GUITC) HSP 1 Score: 92.0 bits (227), Expect = 1.640e-17 Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 46 LADRIALAVIEQFDDLKPRGKPQGREWTVLAGIVAQDTRRRCCTAGADKSCSPCTCL-------RVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWKELHL 357
L D I+ VIE + L GKP EWT+LAGIVA TR +C + D + SP + L R++SLATGNKC+G K+ DG V++DSHAEVLARRA + L+ ++ L
Sbjct: 16 LGDLISQLVIETYKTLPKSGKPNAGEWTILAGIVA--TRVKCKASHEDHAPSPHSSLDPSELEFRLLSLATGNKCLGASKLRGDGRVLNDSHAEVLARRAFMSFLYSQVEL 124
BLAST of mRNA_P-littoralis_Contig1.204.3 vs. uniprot
Match: A0A329S331_9STRA (A to I editase domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S331_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.370e-16 Identity = 122/487 (25.05%), Postives = 166/487 (34.09%), Query Frame = 1
Query: 31 IAAMLLADRIALAVIEQFD-DLKPRGKPQGREWTVLAGIVAQDTRRRCCTAGADKSCSPCTCLRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWKELHLLVSSTAGQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLEPIPQPAAGAARGDNSRGGKTRGWRLKRHLRLHLYISDAPCGDASIYKQKQTRAPSDDXXXXXSRTGSGDGRQRGSDRNGGASIPDVDGERNRPLDDGRGSTKRHRGAAATVVGVSGSDGGCSSRTQPSSPPPLAATKMGLNDSKAGKQEVSRARERVSAAPESMTFTGAKIIAAVKKRGAPDQSFGDGIGGXXXXXXXXXXXXXXXXGDLVLRIDREQEQQLGALRIKSSRSNISEEGRTMSMSCSDKLAKWSVLGLQGGLLAAWVEPFFLSSLVVSEDPRTDGPAPLLAALTRAIPGR 1488
+A+ +A +A +V++ F+ + + R K EWTVLAGIV + P RV++ ATGNKC+GR + DG VV+D HAEVLARRA L L+ E L G LE Q R + LK LHL+IS+APCGDA+IY+ +Q + ++TG D R+R + TGAK + R DQ D +D++ Q +G R+KS RS++ E +T+SMSCSDKLA+W+ LGLQG LL W EP FLSS++VSED + AL RA+ R
Sbjct: 1 MASPAIASSVARSVLQWFESNSQCRKKIPPSEWTVLAGIVLRSPSL--------SDAGPSDKFRVLTAATGNKCLGRRDLNADGLVVNDCHAEVLARRAFLRYLYAEA--LFWQENG---------------------------------------------------------------------LESSEQSIF-------ERHATSHRLVLKPQHSLHLFISEAPCGDAAIYELRQDIVD-ELVQQREAKTGQADQRERSE----------------------------------------------------------------------------------------LRLTGAKAHNK-RSRDVDDQK------------------------DHATPLDKKFAQAVGIARVKSGRSDLPPEKQTLSMSCSDKLARWNALGLQGSLLLQWFEPIFLSSIIVSEDAKAMSVTKQEQALQRAVCAR 287
BLAST of mRNA_P-littoralis_Contig1.204.3 vs. uniprot
Match: A0A8J5MBZ2_9STRA (A to I editase domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MBZ2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.570e-16 Identity = 122/488 (25.00%), Postives = 167/488 (34.22%), Query Frame = 1
Query: 28 QIAAMLLADRIALAVIEQFD-DLKPRGKPQGREWTVLAGIVAQDTRRRCCTAGADKSCSPCTCLRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWKELHLLVSSTAGQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLEPIPQPAAGAARGDNSRGGKTRGWRLKRHLRLHLYISDAPCGDASIYKQKQTRAPSDDXXXXXSRTGSGDGRQRGSDRNGGASIPDVDGERNRPLDDGRGSTKRHRGAAATVVGVSGSDGGCSSRTQPSSPPPLAATKMGLNDSKAGKQEVSRARERVSAAPESMTFTGAKIIAAVKKRGAPDQSFGDGIGGXXXXXXXXXXXXXXXXGDLVLRIDREQEQQLGALRIKSSRSNISEEGRTMSMSCSDKLAKWSVLGLQGGLLAAWVEPFFLSSLVVSEDPRTDGPAPLLAALTRAIPGR 1488
++A+ +A +A +V++ F+ + + R K EWTVLAGIV + + P RV++ ATGNKC+GR + DG VV+D HAEVLARRA L L+ E L G LE Q R + LK LHL+IS+APCGDA+IY+ +Q + ++TG D R R + TGAK + R DQ D +D++ Q +G R+KS RS++ E +T+SMSCSDKLA+W+ LGLQG LL W EP FLSS++VSED + AL RA+ R
Sbjct: 240 KMASPAIASSVARSVLQWFESNSQCRKKIPPSEWTVLAGIVLRSP--------SSSDAGPSDKFRVLTAATGNKCLGRRDLNADGLVVNDCHAEVLARRAFLRYLYAEA--LFWQENG---------------------------------------------------------------------LESSEQSIF-------ERHATSHRLVLKPQHSLHLFISEAPCGDAAIYELRQDIVD-ELVQQREAKTGQADQRDRSE----------------------------------------------------------------------------------------LRLTGAKAHNK-RSRDVDDQK------------------------DHATPLDKKFAQAVGIARVKSGRSDLPPEKQTLSMSCSDKLARWNALGLQGSLLLQWFEPIFLSSIIVSEDAKAMSVTKQEQALQRAVCAR 527
BLAST of mRNA_P-littoralis_Contig1.204.3 vs. uniprot
Match: A0A833X2Q8_PHYIN (Adenosine-deaminase (Editase) domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833X2Q8_PHYIN) HSP 1 Score: 93.6 bits (231), Expect = 3.020e-16 Identity = 124/465 (26.67%), Postives = 166/465 (35.70%), Query Frame = 1
Query: 46 LADRIALAVIEQFD-DLKPRGKPQGREWTVLAGIVAQDTRRRCCTAGADKSCSPCTCLRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWKELHLLVSSTAGQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLEPIPQPAAGAARGDNS---RGGKTRGWRLKRHLRLHLYISDAPCGDASIYKQKQTRAPSDDXXXXXSRTGSGDGRQRGSDRNGGASIPDVDGERNRPLDDGRGSTKRHRGAAATVVGVSGSDGGCSSRTQPSSPPPLAATKMGLNDSKAGKQEVSRARERVSAAPESMTFTGAKIIAAVKKRGAPDQSFGDGIGGXXXXXXXXXXXXXXXXGDLVLRIDREQEQQLGALRIKSSRSNISEEGRTMSMSCSDKLAKWSVLGLQGGLLAAWVEPFFLSSLVVSED 1428
+A +A +V++ F+ + + + K EWTVLAGIV S P LRV+++ATGNKC+GR + DG VV+D HAEVLARRALL L+ E + G ++S R +R LK LHL+IS+APCGDA+IY+ + DV E H+ A T +AG++E S R TGAK A KR DQ D L+ D++ Q +G R+KS RS++ E +T+SMSCSDKLAKW+ LGLQG LL W EP FLSS++VS+D
Sbjct: 6 IASDVARSVLQWFESNSQCQKKVLPSEWTVLAGIVL-----------CSPSSEPNDKLRVLAVATGNKCLGRRDLNADGLVVNDCHAEVLARRALLRYLYAEA---------------------------------------------------------------------------------LSWQENGLELSEHSIFERHSTSRRLVLKPQHSLHLFISEAPCGDAAIYELRH----------------------------------DVVDE------------LVHQREAKT--------------------------------GQAGQRERSALR-----------LTGAK---AHSKR-PRDQDTDD------------------------LQPDKKFAQAVGIARVKSGRSDLPLEKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLSSIIVSKD 261
BLAST of mRNA_P-littoralis_Contig1.204.3 vs. uniprot
Match: A0A7S4PFY0_GUITH (Hypothetical protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PFY0_GUITH) HSP 1 Score: 92.0 bits (227), Expect = 7.040e-16 Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 46 LADRIALAVIEQFDDLKPRGKPQGREWTVLAGIVAQDTRRRCCTAGADKSCSPCTCL-------RVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWKELHL 357
L D I+ VIE + L GKP EWT+LAGIVA TR +C + D + SP + L R++SLATGNKC+G K+ DG V++DSHAEVLARRA + L+ ++ L
Sbjct: 20 LGDLISQLVIETYKTLPKSGKPNAGEWTILAGIVA--TRVKCKASHEDHAPSPHSSLDPSELEFRLLSLATGNKCLGASKLRGDGRVLNDSHAEVLARRAFMSFLYSQVEL 128
BLAST of mRNA_P-littoralis_Contig1.204.3 vs. uniprot
Match: B7FPV9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPV9_PHATC) HSP 1 Score: 89.7 bits (221), Expect = 2.330e-15 Identity = 125/487 (25.67%), Postives = 161/487 (33.06%), Query Frame = 1
Query: 46 LADRIALAVIEQFDDLKP-RGKPQGREWTVLAGIVAQD-TRRRCCTAGADKSCSPCTCLRVVSLATGNKCVGRDKIPDDGSVVHDSHAEVLARRALLLRLWKELHLLVSSTAGQLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLLEPIPQPAAGAARGDNSRGGKTRGWRLKRHLRLHLYISDAPCGDASIYKQKQTRAPSDDXXXXXSRTGSGDGRQRGSDRNGGASIPDVDGERNRPLDDGRGSTKRHRGAAATVVGVSGSDGGCSSRTQPSSPPPLAATKMGLNDSKAGKQEVSRARERVSAAPESMTFTGAKIIAAVKKRGAPDQSFGDGIGGXXXXXXXXXXXXXXXXGDLVLRIDREQEQQLGALRIKSSRSNISEEGRTMSMSCSDKLAKWSVLGLQGGLLAAWVE-PFFLSSLVVSEDPRTDGPAPLLAALTRAIPGRAAL 1497
LAD IA ++ ++ P +GKP+ EWTV A IVA T G D P + VVS ATG KC G V+HDSHAEVLARR L+ LW E+ L+ + + + + D + T R++R L LHLYISD+PCGDASIY P V+ E DD + +TGAK+I + + G GG + RE Q LG LR K+ RSNI R+ SMSCSDK+ +W VLGLQG L W++ P +++VVS+DPR L AL RAI R AL
Sbjct: 4 LADHIAQTALQHYERRLPTKGKPKDSEWTVFASIVATTKTSSTSSDHGLDLDQPPASW--VVSCATGTKCTASQN-DRTGCVLHDSHAEVLARRGLVRSLWMEVAGLIHPPG---------------------------------------------------------------------VFDSTHKAKSCLLEQDET----TNKIRIRRDLLLHLYISDSPCGDASIY-------------------------------------PLVENE-----DD---------------------------------------------------------------VTYELQYTGAKVIVSEHTKVT-----GKDCGGDHQLLLKSSSAIFSSS-----YVAREDVQLLGKLRTKAGRSNIEAARRSTSMSCSDKIVRWMVLGLQGRHLMKWIQDPIRFATIVVSQDPRVRQAQDQLDALERAISTRVAL 299 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.204.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.204.3 >prot_P-littoralis_Contig1.204.3 ID=prot_P-littoralis_Contig1.204.3|Name=mRNA_P-littoralis_Contig1.204.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=869bp MIRPNRRQIAAMLLADRIALAVIEQFDDLKPRGKPQGREWTVLAGIVAQDback to top mRNA from alignment at P-littoralis_Contig1:1023237..1029271+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.204.3 ID=mRNA_P-littoralis_Contig1.204.3|Name=mRNA_P-littoralis_Contig1.204.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6035bp|location=Sequence derived from alignment at P-littoralis_Contig1:1023237..1029271+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1023237..1029271+ >mRNA_P-littoralis_Contig1.204.3 ID=mRNA_P-littoralis_Contig1.204.3|Name=mRNA_P-littoralis_Contig1.204.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2607bp|location=Sequence derived from alignment at P-littoralis_Contig1:1023237..1029271+ (Pylaiella littoralis U1_48)back to top |