prot_P-littoralis_Contig1.195.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.195.4
Unique Nameprot_P-littoralis_Contig1.195.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length592
Homology
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BLAST of mRNA_P-littoralis_Contig1.195.4 vs. uniprot
Match: D7G7D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D8_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 2.530e-154
Identity = 225/297 (75.76%), Postives = 248/297 (83.50%), Query Frame = 0 
Query:   39 MPPTRPLATPCRYGYNCTRPDCFYAHPKGMSKERPKDEKQLCXXXXXXXXXXXXXXXXXXRLMAQLRANIDYCAAWMLVRPNELVRVSAAFQAAFPAPNDGKDRCDFVAAVPISVAHKDWKIYRGISATGTPDGVPSTPQNIQLYPRTRTGERLLQEIENRVGMRWSPTPIRPWKTLERMATHDQHWEENLEMYVLCAGYEASLPGVGVCIELAVTGMVKEEDGGDGQMAGARVARELLGLPGANGQKWFVFHVSRPDESDEEAQFITVRAIVDTSKMPVVPHRSEATRVSRTTQPP 335
            MPPTRPL+TPCRYGYNCTRPDCFYAHPK M K+RPKDE+ LC     XXXXXX       R+M QLRA+IDYC++WMLVRP+ELVRVSAAFQAAFPAPNDGKDRCDFVAAVP+ +A+ DW+ YRGIS TGTPDGVPS PQ IQLYPRTR GERLLQ+ +NRVGMRWSPTP RPWKTLERMATHDQ+WE N + Y+LCAGYEA  PG GV IEL+VT M+K ED GDGQ AGARVARE+LGLPGANGQKWFVFHVSRPDE+ EEA  IT+RAIVDTSKMP VP   E  R  +  QPP
Sbjct:    1 MPPTRPLSTPCRYGYNCTRPDCFYAHPKDMHKDRPKDERPLCTFGSGXXXXXXHNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPNDGKDRCDFVAAVPVRLAYNDWQRYRGISTTGTPDGVPSNPQQIQLYPRTRKGERLLQDPQNRVGMRWSPTPYRPWKTLERMATHDQYWESNQDHYLLCAGYEAFPPGSGVYIELSVTDMMKAEDAGDGQRAGARVAREVLGLPGANGQKWFVFHVSRPDEAHEEAFNITIRAIVDTSKMPGVPRPHEPGRAPQLAQPP 297
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.195.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7D8_ECTSI2.530e-15475.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 399..447
NoneNo IPR availableGENE3D4.10.1000.40coord: 42..108
e-value: 8.8E-10
score: 40.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..530
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..404
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..404
NoneNo IPR availablePANTHERPTHR22891:SF107ARGONAUT-LIKE PROTEINcoord: 352..466
NoneNo IPR availablePANTHERPTHR22891EUKARYOTIC TRANSLATION INITIATION FACTOR 2Ccoord: 352..466
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 531..590
e-value: 7.4E-10
score: 40.5
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 529..586

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1006387..1010997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.195.4mRNA_P-littoralis_Contig1.195.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 1006197..1012166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.195.4 ID=prot_P-littoralis_Contig1.195.4|Name=mRNA_P-littoralis_Contig1.195.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=592bp
MFVAPPFQTSMTLPVCSPAISSAKACRHRHHHYHRHYTMPPTRPLATPCR
YGYNCTRPDCFYAHPKGMSKERPKDEKQLCAFGRGCFRRVCLNDHPQGRL
MAQLRANIDYCAAWMLVRPNELVRVSAAFQAAFPAPNDGKDRCDFVAAVP
ISVAHKDWKIYRGISATGTPDGVPSTPQNIQLYPRTRTGERLLQEIENRV
GMRWSPTPIRPWKTLERMATHDQHWEENLEMYVLCAGYEASLPGVGVCIE
LAVTGMVKEEDGGDGQMAGARVARELLGLPGANGQKWFVFHVSRPDESDE
EAQFITVRAIVDTSKMPVVPHRSEATRVSRTTQPPASLLSTAVSPAAVAA
PAPPAAFNAPPTTAPGSQQHQQHQHQLHQHQHQQYLQQQRQQQQQQHHSQ
QHQQQQQQQQQQQQQQQQQQQQQLQKQQQLQQQQQQQQQQQQQQQGQLST
APASLASYSSSYAFSTSTSASPSPEELGSARLGSFMVDETTTTETSATAA
ATTGAAAPPQPPPPQTPSRTEQQLGTPGGAVDQLNELLAGLNMTKYRPQF
DKQNVDFGSLKKMTLESEISGIGIPLGPRIKLMKELGIERG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf