mRNA_P-littoralis_Contig1.190.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.190.1 vs. uniprot
Match: A0A6H5K8U5_9PHAE (Acyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8U5_9PHAE) HSP 1 Score: 509 bits (1310), Expect = 7.970e-177 Identity = 237/317 (74.76%), Postives = 272/317 (85.80%), Query Frame = 1
Query: 169 PPGSGWVRNTTLFRAKSARGLRDTDRNMVLRELSQELNPNIGSEEPMSMLQEAFSMFLFFLFPGCMVWLPFALAGATWGVHRYLPAGGTLQLLFALGMGVLLLFPLHHWPAAMETWLTPHLFRYTSACSAWEVPLDASRGPYMMVAPPHGVMPVGNIITMLSFPLLWGFHFKGLTTDAAMRLPLMRHVMTWIGCQSAEREKVAQSVSEGWSVGLCPGGVAEIFDTNNDDEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTSLFRSWHDPFGILRALSRKLGFGLLVVWGRLLLPIILRQPLLVVTGRPIVVPKVGAD 1119
PP +GW+RNT L+RA R L DR+ VLRELSQEL+ ++ ++PM+ LQEAFS+ LFFLFPGCMVW+PFALAG W HRYLPAGG LQ+L LG L +PL HWPA TW+TPH+FRYTS C AWE PL+AS GPY + APPHG++PVGN++TM+SFPL+WGF FKGLTTDAA+RLPLMRHVMTWIGCQSA RE+VA+SV EGWSVGLCPGGVAEIFD+NND+EVLFL+ARKGFVKLSLRMGTTLVPCYTFGNT +FRSW DP+GILRALSRKLGFGLL+VWGR+LLPIILRQPLLVVTGRPIVVPK +
Sbjct: 19 PPSAGWIRNTDLYRATGGRELSQADRHKVLRELSQELSTDVRDQQPMTALQEAFSILLFFLFPGCMVWVPFALAGVAWAAHRYLPAGGALQILLGLGAVALFFWPLRHWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTMISFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLRARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGILRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKSAGE 335
BLAST of mRNA_P-littoralis_Contig1.190.1 vs. uniprot
Match: D7G7D5_ECTSI (Acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D5_ECTSI) HSP 1 Score: 465 bits (1197), Expect = 1.910e-159 Identity = 216/282 (76.60%), Postives = 247/282 (87.59%), Query Frame = 1
Query: 274 ELNPNIGSEEPMSMLQEAFSMFLFFLFPGCMVWLPFALAGATWGVHRYLPAGGTLQLLFALGMGVLLLFPLHHWPAAMETWLTPHLFRYTSACSAWEVPLDASRGPYMMVAPPHGVMPVGNIITMLSFPLLWGFHFKGLTTDAAMRLPLMRHVMTWIGCQSAEREKVAQSVSEGWSVGLCPGGVAEIFDTNNDDEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTSLFRSWHDPFGILRALSRKLGFGLLVVWGRLLLPIILRQPLLVVTGRPIVVPKVGAD 1119
EL+ ++G ++PM+ LQEAFS+ LFFLFPGCMVW+PFALAGA W +RYLPAGG Q+L LG L +PL HWPA TW+TPH+FRYTS C AWE PL+AS GPY + APPHG++PVGN++TMLSFP++WGF FKGLTTDAA+RLPLMRHVM WIGCQSA RE+VA+SV EGWSVGLCPGGVAEIFD+NND+EVLFLKARKGFVKLSLRMGTTLVPCYTFGNT +FRSW DP+GILRALSRKLGFGLL+VWGR+LLPIILRQPLLVVTGRPIVVPK +
Sbjct: 69 ELSADVGHQQPMTALQEAFSILLFFLFPGCMVWVPFALAGAAWAAYRYLPAGGAPQVLLGLGAVALFFWPLSHWPAFTRTWITPHIFRYTSCCFAWEAPLEASAGPYFLCAPPHGILPVGNLVTMLSFPMVWGFSFKGLTTDAALRLPLMRHVMAWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGILRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKPAGE 350
BLAST of mRNA_P-littoralis_Contig1.190.1 vs. uniprot
Match: A0A836C9N4_9STRA (Acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9N4_9STRA) HSP 1 Score: 285 bits (728), Expect = 4.720e-89 Identity = 143/314 (45.54%), Postives = 197/314 (62.74%), Query Frame = 1
Query: 169 PPGSGWVRNTTLFRAKSARGLRDTDRNMVLRELSQELNPNIGSEEP--MSMLQEAFSMFLFFLFPGCMVWLPFALAGATWGVHRYLPAGGTLQLLFALGMGVLLLFPLHHWPAAMETWLTPHLFRYTSACSAWEVPLDASRGPYMMVAPPHGVMPVGNIITMLSFPLLWGFHFKGLTTDAAMRLPLMRHVMTWIGCQSAEREKVAQSVSEGWSVGLCPGGVAEIFDTNNDDEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTSLFRSWHDPFGILRALSRKLGFGLLVVWGRLLLPIILRQPLLVVTGRPIVVP 1104
PP GWVR T L A + + +RN VL L+Q L +EP +S LQ+ + F FPGC++W+PF + G + R +G + M + L+P WP + +++TP +FRY S AWE PL +++V PPHGV+P+ N++ +L F +WGF GLT DAA+RLP+MR +M+W+GC SA + G S+G+ PGGVAEIFD N+ DEV+F++ARKGFV+L+LR GT LVPCY FGNT LF W+D +RA+SR+LGFG++ +WGR LP+I RQPL +TG PI VP
Sbjct: 10 PPPQGWVRMTDLV-ASGSYDMATAERNGVLNALAQPLKTAPSYKEPQRLSFLQDLAGVLAFLFFPGCLIWVPFIICGGAYLAFR---SGTAAIATYVFAMAAVTLWPHTRWPGFIASFVTPIVFRYCSLVYAWEAPLPNRH--HILVCPPHGVLPIANLLLLLGFRAIWGFDVDGLTADAALRLPVMRQIMSWVGCGSATASAAKVQLDRGRSIGISPGGVAEIFDVNDPDEVIFMRARKGFVRLALRSGTPLVPCYCFGNTQLFHCWYDSGNRMRAISRRLGFGVMPIWGRFGLPVIYRQPLFAITGTPIEVP 317
BLAST of mRNA_P-littoralis_Contig1.190.1 vs. uniprot
Match: A0A1S6KM83_9STRA (Acyltransferase n=2 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S6KM83_9STRA) HSP 1 Score: 223 bits (569), Expect = 6.300e-65 Identity = 133/326 (40.80%), Postives = 186/326 (57.06%), Query Frame = 1
Query: 160 ADGPPGSGWVRNTTLFRAKSARGLRDTDRNMVLRELSQELNP------NIGSEEPMSMLQEAFSMFLFFLFPGCMVWLPFALAGATWGVHRYLPAGGTLQLLFALGMGVLLLFPLHHWPAAMETWLTPHLFRYTSACSAWEVPLDASRGPYMMVAPPHGVMPVGNIITMLSFPLLWGFHFKGLTTDAAMRLPLMRHVMTWIGCQSAEREKVAQSVSEGWSVGLCPGGVAEIFDTNNDDEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTSLFRSWHDPFGILRALSRKLGFGLLVVWGRLLLPIILRQPLLVVTGRPIVVPKVGAD 1119
A+ PP + +V T ++ A A + D DR V+ LS+ L G E M+ +E ++ + G M+W+P A+ G V + L + F L L P+ + + L +F+Y S A + PLD S G Y+ VAPPHGV+P+GN++T+ + G F+GLTTD A+RLPL RH + IG +A R Q + +GWS+G+ GGVAEIF+ NN DEV+ +K RKGFVKL+LR GT LV CY FGNT L +W+D G+L LSR L G+L +WGR LP++ R P+L +PIVVPKV +
Sbjct: 37 ANFPPSARYVNMTQVY-ATGAHNMPDEDRLKVMNGLSKPLTEAKPGDLGFGDVESMTFCEEFVAIMFLLIIVGSMLWIPIAVLGFALYVRSAMAWVVMLIVFFTLS-----LHPVPRIHDMVHSPLNHFIFKYFSLKMASDAPLD-SAGRYIFVAPPHGVLPMGNLMTVHAMKACGGLEFRGLTTDVALRLPLFRHYLGAIGTIAATRHVAKQYLDKGWSIGISSGGVAEIFEVNNKDEVVLMKERKGFVKLALRTGTPLVACYIFGNTKLLSAWYDDGGVLEGLSRYLKCGVLPLWGRFGLPLMHRHPVLGAMAKPIVVPKVEGE 355
BLAST of mRNA_P-littoralis_Contig1.190.1 vs. uniprot
Match: W7TJC9_9STRA (Acyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJC9_9STRA) HSP 1 Score: 202 bits (514), Expect = 4.120e-57 Identity = 124/327 (37.92%), Postives = 179/327 (54.74%), Query Frame = 1
Query: 157 AADGPPGSGWVRNTTLFRAKSARGLRDTDRNMVLRELSQ---ELNPN---IGSEEPMSMLQEAFSMFLFFLFPGCMVWLPFALAGATWGVHRYLPAGGTLQLLFALGMGVLLLFPLHHWPAAMETWLTPHLFRYTSACSAWEVPLDASRGPYMMVAPPHGVMPVGNIITMLSFPLLWGFHFKGLTTDAAMRLPLMRHVMTWIGCQSAEREKVAQSVSEGWSVGLCPGGVAEIFDTNNDDEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTSLFRSWHDPFGILRALSRKLGFGLLVVWGRLLLPIILRQPLLVVTGRPIVVPKVGAD 1119
AA P + +V T LF A A ++D DR VL+ LS+ E P G E M++ +E + G M+ AL L P+ + + + L +F+Y S A + P+D S+G Y+ VAPPHGV+P GN++T+ + G F+GLTTD A+RLP+ RH + +G A R + + +GWS+G+ GGVAEIF+ NN+DEV+ +K RKGFVKL+L+ GT LVP Y FGNT L +W+D G L+ +SR FG+L++WGR LP++ R P+L V +PIVVP+ +
Sbjct: 11 AAKAPSDARYVNMTELF-AIGAHNMKDEDRLTVLKRLSKPVAEAKPGELGFGQIEHMTVWEEIVAATFLLFVVGSMLXXXXXXXXXXXXXXXXXXXXXXXXXXVALS-----LHPVSRVHSMVHSPLNYFIFKYFSMKMASDYPID-SKGQYIFVAPPHGVLPFGNLLTVHAMKSCGGMEFRGLTTDVALRLPIFRHYLGLVGTIPASRHVARKYLDKGWSLGISSGGVAEIFEVNNNDEVILMKERKGFVKLALQTGTPLVPSYIFGNTKLLSAWYDDAGALQGISRYFKFGILLLWGRFGLPLMHRHPVLGVMAKPIVVPRAEGE 330
BLAST of mRNA_P-littoralis_Contig1.190.1 vs. uniprot
Match: A0A7S2S8P9_9STRA (Acyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8P9_9STRA) HSP 1 Score: 203 bits (516), Expect = 4.240e-57 Identity = 127/327 (38.84%), Postives = 192/327 (58.72%), Query Frame = 1
Query: 181 GW-VRNTTLFRAKSARGLRDTDRNM---VLRELSQELNPNIGSEE-----PMSMLQEAFSMFLF-FLFPGCMVWLPFALAGATWGVHRYLPAGGTLQLLFALGMGVLLLF-PLHHWPAAMETWLTPHLFRYTSACSAWEVPLDASRGPYMMVAPPHGVMPVGNIITMLSFPLLWGFHFKGLTTDAAMRLPLMRHVMTWIGCQSAEREKVAQSVSEGWSVGLCPGGVAEIFDTNN--DDEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTSLFRSWHDPFGILRALSRKLGFGLLVVWGRLLLPIILRQPLLVVTGRPIVVPKVGADT 1122
GW + + ++ LRD++R++ +R LS+ + + E+ P+ L EA ++ LF F PG + P L A + V PA + +G+ V L+F P ++ +W + RY S + + PL+ + PY++VAPPHGV P GNI+TM++FP + G+ FKGL AA+R P+ +H++T IG A R +++++G ++G+ GGVAE+F+TN+ DE + LK RKG VKL+ R G +LVPCY FGNT L +D G+LR +SRK+GF L++ WGR LLPI R P+L G+PI VP+V T
Sbjct: 42 GWKFLDVSKLSTETLLSLRDSERDLRLETIRGLSKGVE-QVSKEDVLRVAPLPFLDEAVAVLLFAFGVPGFIFTFPM-LVFAVYCVWGPRPA------VVLVGIAVALVFVPARFSEKSLSSWPALSIMRYFSFKAVYREPLEVGK-PYILVAPPHGVFPFGNIVTMITFPAVMGYSFKGLAASAALRFPVFKHLLTTIGAIDASRASATKALNQGHTIGISTGGVAEVFETNSATGDECVVLKDRKGLVKLAFRTGASLVPCYLFGNTQLLSLAYDGSGVLRWISRKVGFALILFWGRFLLPIPYRIPILGGLGKPIPVPEVENPT 359
BLAST of mRNA_P-littoralis_Contig1.190.1 vs. uniprot
Match: A0A1E7FKA1_9STRA (Acyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKA1_9STRA) HSP 1 Score: 167 bits (422), Expect = 3.930e-44 Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = 1
Query: 589 PYMMVAPPHGVMPVGNIITMLSFPLLWGFHFKGLTTDAAMRLPLMRHVMTWIGCQSAEREKVAQSVSEGWSVGLCPGGVAEIFDTNNDDEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTSLFRSWHD---PFG--ILRALSRKLGFGLLVVWGRLLLPIILRQPLLVVTGRPI 1095
P +MVAPPHGV P GNI+++LSFP L+G F+GL + AA+R P+ + ++ IG A R ++ G S+G+ GGVAEIF TN+DDE + LK R G +KL++R GT +VPCY FGNT L W P G +L +SRK+GF L+++ GR LPI R+P+L V +PI
Sbjct: 107 PSIMVAPPHGVFPYGNILSVLSFPALYGCTFRGLASSAALRPPIFKQILRSIGIVDASRHVARNTLENGESIGISTGGVAEIFFTNDDDECILLKERIGLIKLAIRTGTNIVPCYLFGNTKLLNCWAGEGIPGGRYVLEKISRKIGFALILIHGRFFLPIPFRKPVLGVMSKPI 280
BLAST of mRNA_P-littoralis_Contig1.190.1 vs. uniprot
Match: A0A448ZRQ3_9STRA (Acyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRQ3_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.440e-43 Identity = 110/301 (36.54%), Postives = 159/301 (52.82%), Query Frame = 1
Query: 235 DTDRNMVLRELSQELNPNIGSEEPMSMLQEAFS-MFLFFLFPGCMVWLPFALAGATWGVHRYLPAGGTLQLLFALGMGVLLL--FPLHHWPAAMETWLTPHLFRYTSACSAWEV------PLDASRGPYMMVAPPHGVMPVGNIITMLSFPLLWGFHFKGLTTDAAMRLPLMRHVMTWIGCQSAEREKVAQSVSEGWSVGLCPGGVAEIFDTNNDDEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTSLFRSWHDP-----FGILRALSRKLGFGLLVVWGRLLLPIILRQPLLVVTGRPI 1095
D +R LS+ ++ E M+ EA +FL F+ P + LP A+A + L G GM +L L P P +++++L + +Y S E P + + + VAPPHGV P GNI++ML FP ++G HF+GL + AA+R P+ + V+ IG A R ++ G S+G+ GGVAEIF TN DE + LK R G +KL++R G LVPCY FGNT+L W +L SRKLGF L++++GR LPI R+P+L V G+P+
Sbjct: 39 DEERKRHFVPLSKVKKGDVLKVEKMTFFAEALCVLFLAFVVPNGVFTLPPAIA-----LIGKLVLGDVKMAFKIFGMFLLPLAILPQEFVPTSLQSYLAIQVSKYFSFRFVVEKRPPPPEPTNKNYHSGIYVAPPHGVFPYGNILSMLGFPTMFGHHFRGLASSAALRPPIFKQVLRSIGTIDASRHVARSALEGGESIGISTGGVAEIFFTNEKDECILLKERIGLIKLAIRTGADLVPCYLFGNTTLLNCWAGEGIPGATTVLEKFSRKLGFALILIYGRFFLPIPFRKPILAVMGKPV 334
BLAST of mRNA_P-littoralis_Contig1.190.1 vs. uniprot
Match: A0A7S1GKX3_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKX3_CYCTE) HSP 1 Score: 150 bits (378), Expect = 4.640e-39 Identity = 76/184 (41.30%), Postives = 111/184 (60.33%), Query Frame = 1
Query: 562 EVPLDASRGPYMMVAPPHGVMPVGNIITMLSFPLLWGFHFKGLTTDAAMRLPLMRHVMTWIGCQSAEREKVAQSVSEGWSVGLCPGGVAEIFDTNNDDEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTSLFRSWHDPF------GILRALSRKLGFGLLVVWGRLLLPIILRQPLLVVTGRPI 1095
E LD+S ++V+PPHGV P GNI ++ +PL++ H + L + A+R P+M+ ++ IG A+R ++ G S+G+ GGVAE+F+TN DE + LK RKG +KL++R G LVPCY FGNT + W I R LSR++G L+ ++GR LPI R P++ V G PI
Sbjct: 6 ETDLDSSEAR-LIVSPPHGVFPYGNIAALIEWPLMFNDHLRALASSTALRAPVMKQILRSIGMTDADRRNARAHLARGISLGISTGGVAEVFETNTSDECILLKERKGLIKLAIRSGAPLVPCYVFGNTKVLDCWAGEGLPTWAQSIQRGLSRRVGLALVAIYGRFGLPIPYRVPIMSVGGIPI 188
BLAST of mRNA_P-littoralis_Contig1.190.1 vs. uniprot
Match: J7HZ45_PHATR (Acyltransferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=J7HZ45_PHATR) HSP 1 Score: 153 bits (386), Expect = 2.620e-38 Identity = 107/310 (34.52%), Postives = 170/310 (54.84%), Query Frame = 1
Query: 241 DRNMVLRELSQELNPNIGSEEPMSMLQE-AFSMFLFFLFPGCMVWLPFALAGATWGVHRYLPAGGTLQLLFALGMGVLLL----FPLHHWPAAMETWLTPHLFRYTS-----------ACSAWEVPLDASRGPYMMVAPPHGVMPVGNIITMLSFPLLWGFHFKGLTTDAAMRLPLMRHVMTWIGCQSAEREKVAQSVSEGW--SVGLCPGGVAEIFDTNNDDEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTSLFRSWHDPFGI------LRALSRK-LGFGLLVVWGRLLLPIILRQPLLVVTGRPI 1095
DR + + +Q ++ + +PMS ++ A +FL F P + +P A TW + +++ L L A G +LL P + PA +++WL + +Y S C+ ++ ++ P ++ A PHGV P GN +T++++PLL G H GL +AA+R P+ + ++ IG + A R V ++ E W +VG+ PGGVAE+F+TN+ +E + LK R G +K+++R G LVP Y +GNT+L+ W GI L +SRK LGF L+ + GR LPI R P+L V G+PI
Sbjct: 46 DRGLATKPAAQATKEDVLTVQPMSFVEHTACCLFLAFGVPNGALTIPIA----TWLIGKFVLRNVFLAFLLA---GCILLPLAILPQEYVPARLQSWLALQILKYFSFSLVMEERPPTMCTGKQL-IEQPARPRIVTAYPHGVFPYGNALTVVTWPLLTGHHIVGLAANAALRTPIFKQILRSIGVKDASRASVRNAL-ETWPFTVGISPGGVAEVFETNHFNEHILLKERIGVIKMAIRTGADLVPGYMYGNTNLYWCWTGE-GIPGARWLLEYVSRKILGFALVPIAGRWRLPIPYRTPILCVVGKPI 345 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.190.1 >prot_P-littoralis_Contig1.190.1 ID=prot_P-littoralis_Contig1.190.1|Name=mRNA_P-littoralis_Contig1.190.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=467bp LSTTDSTTFEFFSICFTFPAHLRSTKVAWIGYRTKTMPPAESLSEESVPPback to top mRNA from alignment at P-littoralis_Contig1:987754..993574+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.190.1 ID=mRNA_P-littoralis_Contig1.190.1|Name=mRNA_P-littoralis_Contig1.190.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5821bp|location=Sequence derived from alignment at P-littoralis_Contig1:987754..993574+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:987754..993574+ >mRNA_P-littoralis_Contig1.190.1 ID=mRNA_P-littoralis_Contig1.190.1|Name=mRNA_P-littoralis_Contig1.190.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1401bp|location=Sequence derived from alignment at P-littoralis_Contig1:987754..993574+ (Pylaiella littoralis U1_48)back to top |