prot_P-littoralis_Contig212.29.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig212.29.2
Unique Nameprot_P-littoralis_Contig212.29.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length424
Homology
BLAST of mRNA_P-littoralis_Contig212.29.2 vs. uniprot
Match: A0A6H5JN42_9PHAE (Ribosome biogenesis protein NOP53 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN42_9PHAE)

HSP 1 Score: 560 bits (1444), Expect = 6.870e-197
Identity = 330/438 (75.34%), Postives = 368/438 (84.02%), Query Frame = 0
Query:    1 MGRKRGLPARAREKLVAEEAAAAIDLDRKEAVLQAKPDEALFVLDAAGSGRKRRKIQKEAKTAKYLSKNEKKLVVHKYLGKGKARAANARKRISDPWAEGEEXXXXXXXXXXEALP-STRGKAGTGDAKPLLSLEGGG-------------EEGGSQGGDGFVVAPRVPGRNVKRPKQSVRNLAKLGVCHPGQSYNPAEDDHEDVLASAVAVELKRQAAIEEESAPVSAGMSKETLAVIVGDEXXXXXXXXXXGSDNAGVSLGKPTPASGKLTRAQRNKQKRAKAAKHEVTIRRAKKDMTKSIGQVTALQREVADEERLRKERRQTKRLLKAEKAKIEAEGATAGGVFGPSTGVAAMSAKR-HNKDVIAGRSVPVNLGEELYGSLRQLKAQGSILLDKVELLKNNKAHPDRRRGKERAKKAPKGFKKKHTYKDRYKDD 423
            MGRKR LPARAREKLVAEE A+A+++++KEAVLQ KPD+ALFV+DAAGSGRKRRK++KEAK AKYLSKNEKKL+VHK+LGKGK RA   R RISDPWA+ ++          EALP ST G+    D+ PLLSL+GG              E GG QGG+ FV +PRVPGRN KRPK S RNLAKLGVCHPGQSYNPAE+DH+DVLASAVAVELKRQ AIEEESAP+SAGMS+ETLAVI    XXXXXXXXXX     G+SLGKPTPASGKLTRAQRNKQKRAKAAKHE+ +RR +K M KSI QVTALQ+EVA++ERLR+ERRQTKRLLKA+KAK+EAEGA AGGVFGPS GVAA+S KR +NKDVIAGRSVPVNLGEEL+GSLRQLKAQGS+L DKVELLK NKAHPDRRRGKERAKKAPKGFK KHTYKDRYKDD
Sbjct:    1 MGRKRRLPARAREKLVAEEVASAMEVEQKEAVLQRKPDKALFVVDAAGSGRKRRKVEKEAKAAKYLSKNEKKLIVHKFLGKGKPRAVG-RNRISDPWADEDQDEATNNKKPQEALPPSTPGEKEAEDSNPLLSLKGGAAAKATAAMEESAREPGGRQGGEYFVTSPRVPGRNAKRPKHSARNLAKLGVCHPGQSYNPAEEDHDDVLASAVAVELKRQEAIEEESAPISAGMSEETLAVIXXXXXXXXXXXXXXXXXTTGLSLGKPTPASGKLTRAQRNKQKRAKAAKHELAVRRNRKHMIKSIDQVTALQQEVAEQERLREERRQTKRLLKAQKAKVEAEGAAAGGVFGPSAGVAALSTKRQNNKDVIAGRSVPVNLGEELHGSLRQLKAQGSVLHDKVELLKANKAHPDRRRGKERAKKAPKGFKYKHTYKDRYKDD 437          
BLAST of mRNA_P-littoralis_Contig212.29.2 vs. uniprot
Match: A0A835YY73_9STRA (Ribosome biogenesis protein NOP53 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY73_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.850e-24
Identity = 92/279 (32.97%), Postives = 139/279 (49.82%), Query Frame = 0
Query:  145 GDGFVVAPRVPGRNVKRPKQSVRNLAKLGVCHPGQSYNPAEDDHEDVLASAVAVELKRQAAIEEESAPVSAGMSKETLAVIVGD-EXXXXXXXXXXGSDNAGVSLGKPTPASGKLTRAQRNKQKRAKAAKHEVTIRRAKKDMTKSIGQVTALQREVADEERLRKERRQTKRLLKAEKAKIEAEGATAGGVFGPSTGVAAMSAKRHNKDVIAGRSVPVNLGEELYGSLRQLKAQGSILLDKVELLKNNKAHPDRRRGKERAKKAPKGFKKKHTYKDRYKD 422
            G+G VV  R       R  +         +  PGQSYNP + DHE+ +A AVA+ELKR+ A++  +AP++ G+S ETLA++VGD E         X      ++L K    +GK+TR                      K  T    ++ A+  E+  + + R E R+ K++LKA K  +  + A                      DV+   S+PVNL EEL GSLRQ++ +GS+L+D+V +LK    HPD+++   RAK   K  KK+  +++RYKD
Sbjct:   91 GEGAVVRAR---NGTDRSAKLTSYALGAPMALPGQSYNPEQGDHEEAVAEAVALELKREDAVKAANAPIAQGLSAETLALLVGDDEGSSSDEDSGXXXXXXDITLAKKQ--TGKMTRXXXXXXXXXXXXXXXXXXXXXXKSSTHEQHRIKAIGAELEQQAKDRAEARKAKQMLKANKDGVPLKDA----------------------DVMQAPSIPVNLAEELSGSLRQMRTRGSLLVDRVAMLKRVGVHPDKQKAAARAKMEKKP-KKRFKFQERYKD 341          
BLAST of mRNA_P-littoralis_Contig212.29.2 vs. uniprot
Match: A0A7S2JT46_9STRA (Ribosome biogenesis protein NOP53 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JT46_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.250e-17
Identity = 92/265 (34.72%), Postives = 140/265 (52.83%), Query Frame = 0
Query:  149 VVAPRVPGRNVKR---PKQSVRNLAKLGVC--HPGQSYNPAEDDHEDVLASAVAVELKRQAAIEEESAPVSAGMSKETLAVIVGDEXXXXXXXXXXGSDNAGVSLG---KPTPASGKLTRAQRNKQKRAKAAKHEVTIRRAK--KDMTKSIGQVTALQREVADEERLRKERRQTKRLLKAEKAKIEAEGATAGGVFGPSTGVAAMSAKRHNKDVIAGRSVPVNLGEEL-YGSLRQLKAQGSILLDKVELLKNNKAHPDRRRGKER 402
            +V P    R  +R   P    +   K+ V   H GQSY P ++ H+DV+  A+AVEL+R+ A+E    P+  GMSKETLA++         XXXXX  D  G++     +P     KLTRAQRN+QKR +  +H+V +++ K  K   +S+ +V  + + +  EE  +KER+Q    L  EK K E  G            V  +S+K    D I   ++PV L  E+  GSLR +K +GS++ +++E +   K    RR G++R
Sbjct:  167 LVTPAEAARRAQRKSKPHTHKQQQPKVAVDLPHGGQSYQPDKEQHQDVIGEALAVELRRKDAVEYRRTPLWNGMSKETLALLDTRSDSDSDXXXXXXXDEGGIAAAGNFQPKKKKEKLTRAQRNRQKRVR--QHDVEMQKQKRLKKFNQSVMEVKTISKTLRREEADKKERKQQLNEL-LEKKKAEPLGVNL---------VEKLSSKI---DPINAPALPVALSSEIAQGSLRSIKPKGSLMSERLESMAARKMAHKRRIGEKR 416          
BLAST of mRNA_P-littoralis_Contig212.29.2 vs. uniprot
Match: B8BPY1_THAPS (Ribosome biogenesis protein NOP53 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BPY1_THAPS)

HSP 1 Score: 85.9 bits (211), Expect = 1.820e-14
Identity = 84/236 (35.59%), Postives = 121/236 (51.27%), Query Frame = 0
Query:  160 KRPKQSVRNLAKLGVCHPGQSYNPAEDDHEDVLASAVAVELKRQAAIEEESAPVSAGMSKETLAVIVGD----EXXXXXXXXXXGSDNAGVSLGKPTPASGKLTRAQRNKQKRAKAAKHEVTIRRAKKDMTKSIGQVTALQREVADEERLRKERRQTKRLLKAEKAKIEAEGATAGGVFGPSTGVAAMSAKRHNKDVIAGRSVPVNLGEELYG------SLRQLKAQGSILLDKVE 385
            K  + + +    L V HPGQSY P ++ H+D +  A+++E++R  A E +S P+S+GMS+ T   IVG+    EXXXXXXXXXX  + A +   K      KLTRAQRNKQKR KA +  +  R+  K     I +V    + V +EE+L   R+     L+ EK              G +   A         D +   S+PV L EEL G      SLR +  +GS++ D++E
Sbjct:  214 KHAQLTAKPTLALEVAHPGQSYRPDKEQHQDAIGEALSIEIRRNEAEEYKSKPISSGMSEFTKRFIVGESDSEEXXXXXXXXXXXGNVATMGATKLIKKKEKLTRAQRNKQKRVKAEQTALFARKQSKQFNHQINEVHKHSKAVKEEEKLHSVRQSELAQLRDEKKSQP---------LGKNLWNAVSQV-----DPLRAPSLPVALTEELEGKSGGKGSLRTVTPKGSLVTDRLE 435          
BLAST of mRNA_P-littoralis_Contig212.29.2 vs. uniprot
Match: A0A7S4UQA2_9STRA (Ribosome biogenesis protein NOP53 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UQA2_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.550e-13
Identity = 94/283 (33.22%), Postives = 140/283 (49.47%), Query Frame = 0
Query:  149 VVAPRVPGRNVKRPKQSVRNLAKLGVCHPGQSYNPAEDDHEDVLASAVAVELKRQAAIEEESAPVSAGMSKETLAVIV--GDEXXXXXXXXXXGSDNAGVSL-----GKPTPASGKLTRAQRNKQKRAKAAKHEVTIRRAKKDMTKSIGQVTALQREVADEERLRKERRQTKRLLKAEKAKIEAEG-------ATAGGVFGPSTGVAAMSAK-RHNKDVIAGRSVPVNLGEELYGSLRQLKAQGSILLDKVE-LLKNNKAHPDRR------RGKERAKKAPKG 409
            VV  R   +++ +P         + + H GQSYNP E+ H+DV+  A+++ELKR+ A+     P+S G+SKETLA++V   DE XXXXXXXXX       S       K      K TR QRNKQKR +     +  R+ +K     + +     +E+  EERL+KER +  + ++ EK K E  G       +    +  PS  VA  S   R  KD     +  V        SLR+++ +GS+L D+ + ++  N  +P R       +GK+R  K  KG
Sbjct:  201 VVKIRTLTKSLSKP------TVPIELAHGGQSYNPDENQHQDVIGEALSIELKREEALAYRKTPISNGLSKETLAIMVHSSDEEXXXXXXXXXXXXXNNDSFQPRLKSKVINRENKKTRVQRNKQKRTREEHASIQQRKKQKTFLHEVNEAKLRAKEIKQEERLQKERAEYLKRVQEEKRK-EPLGLNFLHKLSDVDPIHVPSLPVALTSELGRKEKDXXXXXNETVPTATT---SLRKVRPKGSLLTDRSQSMISRNMVNPKRGANKFIVQGKKRTMKGGKG 473          
BLAST of mRNA_P-littoralis_Contig212.29.2 vs. uniprot
Match: B5Y3Y8_PHATC (Ribosome biogenesis protein NOP53 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3Y8_PHATC)

HSP 1 Score: 80.5 bits (197), Expect = 8.590e-13
Identity = 66/236 (27.97%), Postives = 116/236 (49.15%), Query Frame = 0
Query:  150 VAPRVPGRNVKRPKQSVRNLAKLGVCHPGQSYNPAEDDHEDVLASAVAVELKRQAAIEEESAPVSAGMSKETLAVIVGDEXXXXXXXXXXGSDNAGVSLGKPTPASGKLTRAQRNKQKRAKAAKHEVTIRRAKKDMTKSIGQVTALQREVADEERLRKERRQTKRLLKAEKAKIEAEGATAGGVFGPSTGVAAMSAKRHNKDVIAGRSVPVNLGEELY-GSLRQLKAQGSILLDKV 384
             AP       ++ K   +    + V   GQSY P  + H+ ++  AV +E++R  AIE    P++ G+S+ET A++V D            ++   +  G     + KLT+AQRNKQ+R +  +  + ++R +K + K +G+V   ++E+   ER +K+        + E+ K EAE     G+         +  +   KD I+  + PV L  E+   SLR +K +GS+L D++
Sbjct:  155 TAPEACVIKAQKAKVQPKLAVAVDVAKDGQSYRPDPNAHKSIIQKAVDLEMRRGKAIEYNRTPIAQGLSEETKALLVEDTDSEDEESDVE-NETEDILAGSLPRRTDKLTKAQRNKQRRLRKEQVLLEMKRREKKLMKQVGEVGRYRKELTRAEREKKD--------EVERQKAEAEKKRPLGID--------LEHQHAAKDPISTPTYPVALPNEIQRSSLRTIKPKGSLLTDRM 373          
BLAST of mRNA_P-littoralis_Contig212.29.2 vs. uniprot
Match: A0A448ZT81_9STRA (Ribosome biogenesis protein NOP53 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZT81_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.980e-10
Identity = 106/390 (27.18%), Postives = 165/390 (42.31%), Query Frame = 0
Query:   29 KEAVLQAKPDEALFVLDA----------AGSGRKRRKIQKEAKTAKYLSK---NEKKLVVHKYLGKGKARAANARKRIS--------DPWAEGEEXXXXXXXXXXEALPSTRGKAGTGDAKPLLSLEGGGEEGGSQGGDGFVVAPRVPGRNVKR-----PKQSVRNLAKLGVCHPGQSYNPAEDDHEDVLASAVAVELKRQAAIEEESAPVSAGMSKETLAVIVGDEXXXXXXXXXXGSDNAGVSLGKPTPAS------GKLTRAQRNKQKRAKAAKHEVTIRRAKKDMTKSIGQVTALQREVADEERLRKERRQTKRLLKAEKAKIEAEGATAGGVFGPSTGVAAMSAKRHNKDVIAGRSVPVNLGEELYG--SLRQLKAQGSILLDKV 384
            +E  +  K DE LFVLD           A   +++RK    AK  + + +   N     +          A  A KRI         D WA+ ++           AL  ++ KA    AKP  ++        S G  G V +  V     K      PK   R    + +   GQSYNP + DH++ +  A+ VE KR+ A +      S GM  ET A+++GD            SD        PT  +       K+TRAQRNKQKR +A ++E+  R+ +K     +  V ++ R +  EE    ER++TK   K E+ K++ E +    ++   T +A  + +          + PV L  EL    SLR +K +GS++ D++
Sbjct:   32 EEGAVAEKADEELFVLDTTAVVPSKKQIAAKKKQQRKQSVSAKEQRQIQRLVDNHSAKELEALAKTTSITAKRAPKRIKARQTRPTFDMWADEDDSGGNS-----SALVKSKSKASE-SAKPKTAVAV------SSGPHGIVPSNHVKIGTTKAMPAPLPKNKDRAPVMVDLAGSGQSYNPDQKDHKNAIQKALLVETKRKVAEKNAKESASQGMRPETRALLLGDSDSEDE------SDXXXXXXXXPTTEAIAKKRPEKMTRAQRNKQKRIRAEQYEIKQRKKQKQFAHELRGVKSVNRTLXKEEA---ERKKTKE--KIEQLKLDTERSKGKDLY---TQLAEENPRY-------APTYPVALPGELRSGASLRTIKPKGSLVTDRM 388          
BLAST of mRNA_P-littoralis_Contig212.29.2 vs. uniprot
Match: K0TBJ2_THAOC (Ribosome biogenesis protein NOP53 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBJ2_THAOC)

HSP 1 Score: 72.0 bits (175), Expect = 5.580e-10
Identity = 77/244 (31.56%), Postives = 123/244 (50.41%), Query Frame = 0
Query:  151 APRVPGRNVKRPKQS---VRNLAKLGVCHPGQSYNPAEDDHEDVLASAVAVELKRQAAIEEESAPVSAGMSKETLAVIVGD-EXXXXXXXXXXGSDNAGVSLGKPTPASGKLTRAQRNKQKRAKAAKHEVTIRRAKKDMTKSIGQVTALQREVADEERLRKERRQTKRLLKAEKAKIEAEGATAGGVFGPSTGVAAMSAKRHNKDVIAGRSVPVNLGEELY-----GSLRQLKAQGSILLDKVE 385
            AP++  + +K  + +     N   + V HPGQSY+P ++ H+D +  A+++E++R  A++ +  P+S GMS+ T   I+ + +XXXXXXXXXX + N    + K      KLTRAQRNKQKR KA +  +  RR +K     + +V    +     E  +++R +    LK EK K    G               +  K      I   ++PV L  E+      G LR L  +GS++ D++E
Sbjct:  184 APKLSNKQLKARRNAELAAPNKLAVEVAHPGQSYHPDKEHHQDAIGEALSIEIRRNEALDYKRKPISDGMSQFTKEFIINNSDXXXXXXXXXXTATNVSTKIIKRKE---KLTRAQRNKQKRVKAEETALKERRERKKFMHQVHEVKKTSKXXXXXEEEQRQRNEELAKLKHEK-KARPLGKN-------------VWEKISQDSPIDAPTLPVALTGEIRSGKEGGGLRTLAPKGSLVTDRLE 410          
BLAST of mRNA_P-littoralis_Contig212.29.2 vs. uniprot
Match: UPI0014590C39 (ribosome biogenesis protein NOP53-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014590C39)

HSP 1 Score: 68.9 bits (167), Expect = 5.300e-9
Identity = 73/269 (27.14%), Postives = 115/269 (42.75%), Query Frame = 0
Query:  154 VPGRNVKRPKQSVRNLAKLGVCHPGQSYNPAEDDHEDVLASAVAVELKRQA-------AIEEESAPVSAGMSKETLA--VIVGDEXXXXXXXXXXGSDNAGVSLGKPTPASGKLTRAQRNKQKRAKAAKHEVTIRRAKKDMTKSIGQVTALQREVADEERLRKERRQTKRLLKAEKAKIEAEGATAGGVFGPSTGVAAMSAKRHNKDVIAGRSVPVNLGEELYGSLRQLKAQGSILLDKVELLKNNKAHPDRRRGKERAKKAPKGFKKK 413
            VP    K+P +    +  + V  PG SYNP+ +DH+++LA A  VE+KR+        A+E +   +SA   +  L   +  G              +   +S+  P     K TR QRNK+K  K  KH     +  K   K I ++  ++ E+   E+   ER       K +K + E  G               M+ ++  K       + + L EEL GSLR LK +G +L+D+ + L+       R    ++ K  PK F KK
Sbjct:  181 VPKHYNKKPSE----MTGVQVPDPGASYNPSYNDHQNLLAKAYDVEVKRERKERKLYNAVEAKFRSISAAELEANLQAEMTAGLNKEEEDPVEFTEEELEKLSVAPPVRREDKKTRIQRNKEKNIKEKKHGKIKEKTTKTREKEIFRLKTIKAEIKAREKKLSER------AKQKKERYEKSG---------------MNTRKLGKVKFEEAEIEIKLSEELPGSLRLLKPEGHLLVDRFKSLQKRNVIEPRLEASKKRKYKPKLFLKK 424          
BLAST of mRNA_P-littoralis_Contig212.29.2 vs. uniprot
Match: A0A7S0CMX1_9STRA (Ribosome biogenesis protein NOP53 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CMX1_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.160e-7
Identity = 64/233 (27.47%), Postives = 110/233 (47.21%), Query Frame = 0
Query:  172 LGVCHPGQSYNPAEDDHEDVLASAVAVELKRQAAIEEESAPVSAGMSKETLAVIVGDEXXXXXXXXXXGSDNAGVSLGKPTPASGKLTRAQRNKQKRAKAAKHEVTIRRAKKDMTKSIGQVTALQREVADEERLRKERRQTKRLLKAEKAKIEAEGATAGGVFGPSTGVAAMSAKRHNKDVIAGRSVPVNLGEELYGS---------LRQLKAQGSILLDKVELLKNNKAHPD 395
            + V H GQSY+P  + H+DV+  A+A+ELKR+ A+E    P+ A MS+ETL +++ ++            D   +          K+ R  RN+++R  A +     R+ +K    ++  V +  ++V  +E   +E+R   +  K E+      G               M++K   KD I   S+PV L  EL GS         LR++K +G++L ++V  L++ K   D
Sbjct:    3 IEVAHGGQSYHPDGELHQDVIGEALAMELKREEAMEYLKTPI-AEMSEETLRILINEDSESEEE-----EDIETMETDVYRKKQEKIPRNVRNRRRRHAALQLVYLERKKQKQFLSTVHFVKSAHKKVRKDELTNQEKRDQIQTWKDEEIAQNPLGH-------------GMASKLSEKDPIRFPSLPVALTSELNGSKDNGNVNVPLRRVKPKGNLLEERVYSLRDRKLLTD 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig212.29.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5JN42_9PHAE6.870e-19775.34Ribosome biogenesis protein NOP53 n=2 Tax=Ectocarp... [more]
A0A835YY73_9STRA2.850e-2432.97Ribosome biogenesis protein NOP53 n=1 Tax=Tribonem... [more]
A0A7S2JT46_9STRA2.250e-1734.72Ribosome biogenesis protein NOP53 n=1 Tax=Leptocyl... [more]
B8BPY1_THAPS1.820e-1435.59Ribosome biogenesis protein NOP53 n=1 Tax=Thalassi... [more]
A0A7S4UQA2_9STRA2.550e-1333.22Ribosome biogenesis protein NOP53 n=2 Tax=Ditylum ... [more]
B5Y3Y8_PHATC8.590e-1327.97Ribosome biogenesis protein NOP53 n=1 Tax=Phaeodac... [more]
A0A448ZT81_9STRA2.980e-1027.18Ribosome biogenesis protein NOP53 n=1 Tax=Pseudo-n... [more]
K0TBJ2_THAOC5.580e-1031.56Ribosome biogenesis protein NOP53 n=1 Tax=Thalassi... [more]
UPI0014590C395.300e-927.14ribosome biogenesis protein NOP53-like n=1 Tax=Pec... [more]
A0A7S0CMX1_9STRA1.160e-727.47Ribosome biogenesis protein NOP53 n=1 Tax=Probosci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 370..390
NoneNo IPR availableCOILSCoilCoilcoord: 264..284
NoneNo IPR availableCOILSCoilCoilcoord: 302..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..423
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..240
NoneNo IPR availablePANTHERPTHR14211:SF7RIBOSOME BIOGENESIS PROTEIN NOP53coord: 31..414
IPR011687Ribosome biogenesis protein Nop53/GLTSCR2PIRSFPIRSF017302Gltscr2coord: 16..117
e-value: 0.032
score: 11.1
coord: 341..422
e-value: 5.4E-9
score: 33.4
coord: 147..326
e-value: 2.1E-11
score: 41.3
IPR011687Ribosome biogenesis protein Nop53/GLTSCR2PFAMPF07767Nop53coord: 30..385
e-value: 9.8E-35
score: 120.6
IPR011687Ribosome biogenesis protein Nop53/GLTSCR2PANTHERPTHR14211GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2coord: 31..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig212contigP-littoralis_Contig212:93931..105681 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig212.29.2mRNA_P-littoralis_Contig212.29.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig212 93695..106350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig212.29.2 ID=prot_P-littoralis_Contig212.29.2|Name=mRNA_P-littoralis_Contig212.29.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=424bp
MGRKRGLPARAREKLVAEEAAAAIDLDRKEAVLQAKPDEALFVLDAAGSG
RKRRKIQKEAKTAKYLSKNEKKLVVHKYLGKGKARAANARKRISDPWAEG
EEEGEGDKDKDKEALPSTRGKAGTGDAKPLLSLEGGGEEGGSQGGDGFVV
APRVPGRNVKRPKQSVRNLAKLGVCHPGQSYNPAEDDHEDVLASAVAVEL
KRQAAIEEESAPVSAGMSKETLAVIVGDEDDEESSDEDDGSDNAGVSLGK
PTPASGKLTRAQRNKQKRAKAAKHEVTIRRAKKDMTKSIGQVTALQREVA
DEERLRKERRQTKRLLKAEKAKIEAEGATAGGVFGPSTGVAAMSAKRHNK
DVIAGRSVPVNLGEELYGSLRQLKAQGSILLDKVELLKNNKAHPDRRRGK
ERAKKAPKGFKKKHTYKDRYKDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011687Nop53/GLTSCR2