mRNA_P-littoralis_Contig211.98.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig211.98.1 vs. uniprot
Match: D8LTS7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTS7_ECTSI) HSP 1 Score: 449 bits (1155), Expect = 2.240e-151 Identity = 251/309 (81.23%), Postives = 268/309 (86.73%), Query Frame = 1
Query: 19 MAPVISSARCLGCALLAAASSSVSAFMVPLASQ--GVYAGQRQHRSGWLLQQPTRHT-----ARGGRGVVSMMGRRAAKIARVKGREDAKRGKTFARIGKKIIMAVKAGGPNEETNKALADTIREAKHNSVPKDNITRAIKRAVDGSQGDFKEVIYEAYGHGGTGIVVTALTDNVNRAIAEVKTVWRKQGLKQAAQGSVLFQFEKRGRVEVEGEADEEQVIEAAIESGVDDVEVVEGDDEGTSWVLTTPKDLMTLAGALSDAGIKGETGLALIPSGLAEVDDETMELNLAAVEALLELEDVDSVDHNMA 924
MAPV ARCLGCAL AAA S +SAF+ P ASQ G+ A R+H G QPT+ RG V MMGRRAAKIA+VKGREDAKRGK FARIGKKIIMAVKAGGPNE+TNK LADTI+EAKHNSVPKDNI RAIKRAVDGSQGDFKEVIYEAYGHGGTG+VVTALTDNVNRAIA+VK VW+KQGLKQAAQGSVLFQFEKRGRVEV+GE DEEQVIEAAIE+GVDDVEVVEGD EGTSW+LTTPKDLMTL GALS+AGI GETGLALIPSGLA+VDDE MELNLAAVEALLELEDVD+VDHNMA
Sbjct: 1 MAPV--GARCLGCALFAAALSGISAFIAPTASQLQGITALGRRHHDG-RSHQPTQXXXXXXXGRGSAAGVVMMGRRAAKIAKVKGREDAKRGKAFARIGKKIIMAVKAGGPNEDTNKQLADTIKEAKHNSVPKDNIARAIKRAVDGSQGDFKEVIYEAYGHGGTGMVVTALTDNVNRAIADVKAVWKKQGLKQAAQGSVLFQFEKRGRVEVQGEVDEEQVIEAAIEAGVDDVEVVEGDHEGTSWILTTPKDLMTLTGALSEAGITGETGLALIPSGLADVDDEAMELNLAAVEALLELEDVDTVDHNMA 306
BLAST of mRNA_P-littoralis_Contig211.98.1 vs. uniprot
Match: A0A836C9R2_9STRA (Transcriptional regulator TACO1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R2_9STRA) HSP 1 Score: 291 bits (746), Expect = 2.870e-90 Identity = 157/241 (65.15%), Postives = 187/241 (77.59%), Query Frame = 1
Query: 202 VVSMMGRRAAKIARVKGREDAKRGKTFARIGKKIIMAVKAGGPNEETNKALADTIREAKHNSVPKDNITRAIKRAVDGSQGDFKEVIYEAYGHGGTGIVVTALTDNVNRAIAEVKTVWRKQGLKQAAQGSVLFQFEKRGRVEVEGEADEEQVIEAAIESGVDDVEVVEGDDEGTSWVLTTPKDLMTLAGALSDAGIKGETGLALIPSGLAEVDDETMELNLAAVEALLELEDVDSVDHNMA 924
V MMGRRA KIAR K + D KR K FARIGKKIIMAVKAGGP+E+ NK L+D I+EAK +VPKDNI RAIKRA +G+QGD+KE YEAYGHGG G+++TALTDNVNRA A+++T+ K+GLK A+ GSV FQF +RG++EV DEEQVIEAAI + VDDVEVVEG++EGTSWVLT P L L L+ GI GE LA IP+ + EV D MELNLAA+EAL L+DVD V+HNMA
Sbjct: 51 TVVMMGRRAEKIARTKEKGDLKRTKIFARIGKKIIMAVKAGGPSEDANKLLSDLIKEAKLYNVPKDNIQRAIKRATEGTQGDYKENSYEAYGHGGIGLIITALTDNVNRANADIRTLGTKKGLKMASSGSVAFQFTRRGKIEVNAVLDEEQVIEAAIAADVDDVEVVEGEEEGTSWVLTDPSMLSMLVDGLAAVGITGEPSLAHIPNEVVEVSDVDMELNLAAIEALEGLDDVDQVEHNMA 291
BLAST of mRNA_P-littoralis_Contig211.98.1 vs. uniprot
Match: A0A6S9GJB7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GJB7_HETAK) HSP 1 Score: 242 bits (617), Expect = 3.250e-71 Identity = 131/240 (54.58%), Postives = 169/240 (70.42%), Query Frame = 1
Query: 202 VVSMMGRRAAKIARVKGREDAKRGKTFARIGKKIIMAVKAGGPNEETNKALADTIREAKHNSVPKDNITRAIKRAVDGSQGDFKEVIYEAYGHGGTGIVVTALTDNVNRAIAEVKTVWRKQGLKQAAQGSVLFQFEKRGRVEVEGEADEEQVIEAAIESGVDDVEVVEGDDEGTSWVLTTPKDLMTLAGALSDAGIKGETGLALIPSGLAEVDDETMELNLAAVEALLELEDVDSVDHNM 921
+ MMGRR+ KIAR KG EDAKRGK FARIGKKII+AVKAGGP E+NKALAD ++EAK +VPK+NI RAIKRA DFKE +YEAYG GG GI+++ LTDN NRA+ ++K +K + A+ GSV F F+K+G +EV E DE+ V+E A+E GVDD + EG++EGTS V P + +A AL AG + LA +P+ + D+ T E NLA +EAL EL+DVD V+HN+
Sbjct: 47 TLVMMGRRSEKIARKKGSEDAKRGKIFARIGKKIIVAVKAGGPVVESNKALADILKEAKSYNVPKENIDRAIKRAEAADAADFKEAVYEAYGAGGVGIIISCLTDNTNRALTDIKNAIKKSEVTLASSGSVAFNFDKKGCLEVASELDEDTVLEIALEGGVDDFVLEEGEEEGTSVVYVAPGETKLMADALEAAGHAPKPSLANVPNVWVDCDEATAEANLAVIEALEELDDVDCVEHNI 286
BLAST of mRNA_P-littoralis_Contig211.98.1 vs. uniprot
Match: A0A7S1TSS5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSS5_9STRA) HSP 1 Score: 227 bits (578), Expect = 3.090e-65 Identity = 126/245 (51.43%), Postives = 168/245 (68.57%), Query Frame = 1
Query: 202 VVSMMGRRAAKIARVKGREDAKRGKTFARIGKKIIMAVKAGGPNEETNKALADTIREAKHNSVPKDNITRAIKRAVDGSQGDFKEVIYEAYGHGGTGIVVTALTDNVNRAIAEVKTVWRKQGLKQAAQGSVLFQFEKRGRVEVEGEADEEQVIEAAIESGVDDVEVVEG---DDEGTSWVLTTPKDLMTLAGALSDA-GIKGET-GLALIPSGLAEVDDETMELNLAAVEALLELEDVDSVDHNM 921
V MMGRRAAKIA KG++DA + K +ARIGK II+AVKAGGP+ E+N+ L+ + EAK VPKDNI RAI RA DFKE ++EAYG GG G+++ L+DN NRA +VKT +K GL AA GSV F F++RGR+EV+G DEE+V+E AIE+ VDD E+ DDE + + T P+ + L AL + G++G T L +P L + +DE ++N+AA++ LLE +DVDSVDHNM
Sbjct: 61 TVVMMGRRAAKIAARKGKQDALKAKAYARIGKMIIIAVKAGGPDPESNRQLSQVLLEAKGVGVPKDNIKRAIDRASSADAADFKESVFEAYGKGGVGLLINVLSDNANRAATQVKTAIKKGGLTAAASGSVAFNFDRRGRLEVKGLLDEEEVLEVAIEADVDDYEMSTAKNDDDEDITVIFTAPESMSALGSALGEMDGVEGVTPSLVNVPKSLMDCEDEDYDINVAAIDLLLESDDVDSVDHNM 305
BLAST of mRNA_P-littoralis_Contig211.98.1 vs. uniprot
Match: A0A7S4LII5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LII5_9EUGL) HSP 1 Score: 222 bits (566), Expect = 3.640e-62 Identity = 127/239 (53.14%), Postives = 161/239 (67.36%), Query Frame = 1
Query: 211 MMGRRAAKIARVKGREDAKRGKTFARIGKKIIMAVKAGGPNEETNKALADTIREAKHNSVPKDNITRAIKRAVDGSQGDFKEVIYEAYGHGGTGIVVTALTDNVNRAIAEVKTVWRKQGLKQAAQGSVLFQFEKRGRVEVEGEADEEQVIEAAIESGVDDVEVVEGDDEGTSWVLTTPKDLMTLAGALSDAGIK-GETGLALIPSGLAEVDDETMELNLAAVEALLELEDVDSVDHNMA 924
+ GRR+AKIA KGR DAK+ K +AR GKKIIMAVKAGGP+E N L D I+EAK +VP NI RAIKR + DFKE ++EAYG GG G+++T L+DN NRA +EVK+ K GL A+ GSV F FE+ G + E E DE+ V+EAA+E+ VDD EVV+GDD G VLT PK L AL G+K GE+ L P+ E+ +E E+N AA+E + L+DVDS+ HNMA
Sbjct: 185 LYGRRSAKIAATKGRADAKKAKLYARYGKKIIMAVKAGGPDEGANTTLRDVIKEAKDANVPIANIDRAIKRGSENDAADFKESLFEAYGKGGAGLMITVLSDNANRASSEVKSAINKSGLTVASPGSVAFNFERMGAIVCEEEVDEDLVLEAAMEADVDDAEVVQGDD-GEWLVLTDPKQTTQLKAALMAQGVKCGESALIYHPNNYVELSEEDAEINDAAIERIEALDDVDSIAHNMA 422
BLAST of mRNA_P-littoralis_Contig211.98.1 vs. uniprot
Match: B8C5V4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5V4_THAPS) HSP 1 Score: 206 bits (524), Expect = 2.340e-58 Identity = 117/240 (48.75%), Postives = 159/240 (66.25%), Query Frame = 1
Query: 214 MGRRAAKIARVKGREDAKRGKTFARIGKKIIMAVKAGGPNEE-TNKALADTIREAKHNSVPKDNITRAIKRAVDGSQGDFKEVIYEAYGHGGTGIVVTALTDNVNRAIAEVKTVWRKQGLKQAAQGSVLFQFEKRGRVEVEGEADEEQVIEAAIESGVDDVEVVEGDDEGTSWVLTTPKDLMTLAGALSDAGIK--GETGLALIPSGLAEVDDETMELNLAAVEALLELEDVDSVDHNMA 924
MGR AA A KG+ DAK+ K A GKKIIMAVK GG + N+ L + I+ AK NSVP DNI RAIKRA + GDF E +EAYG GG +++ L+DN NR+ A+VKT K K A QGSVLF ++ +G++E+ DEE+++ AAI++GV+D+E+VEGD+EGTS V T PK+ + A+ G++ + GLA I E +E + N+A +EAL EL+DVDSV+HNM+
Sbjct: 1 MGRAAAVRAATKGKTDAKKAKVNAYYGKKIIMAVKQGGSADPIANRQLGELIKAAKQNSVPVDNINRAIKRATEKDAGDFSEATFEAYGFGGASLIINVLSDNSNRSTADVKTAVNKLKGKMAEQGSVLFMYDLKGKIEIPAVVDEEELLMAAIDAGVEDMELVEGDEEGTSIVYTDPKETSAMFDAVKAIGLEEGSKMGLAHISKAPVECTEEDFDKNMAIIEALEELDDVDSVEHNMS 240
BLAST of mRNA_P-littoralis_Contig211.98.1 vs. uniprot
Match: A0A7S0ATJ5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ATJ5_9STRA) HSP 1 Score: 207 bits (528), Expect = 2.600e-58 Identity = 117/244 (47.95%), Postives = 160/244 (65.57%), Query Frame = 1
Query: 202 VVSMMGRRAAKIARVKGREDAKRGKTFARIGKKIIMAVKAGGPNE-ETNKALADTIREAKHNSVPKDNITRAIKRAVDGSQGDFKEVIYEAYGHGGTGIVVTALTDNVNRAIAEVKTVWRKQGLKQAAQGSVLFQFEKRGRVEVEGEADEEQVIEAAIESGVDDVEVVEGDDEGTSWVLTTPKDLMTLAGALSDAGIKGET--GLALIPSGLAEVDDETMELNLAAVEALLELEDVDSVDHNMA 924
++ GR AA A KG+ DAK+ KT A GKKIIMAVK GG + N+ALA+ I+ AK NSVP DNI RAIKRA + +F E +EAYG GG +V+ L+DN NR A+VK+ K+G K A QGSVLF ++++G+VE+ DEE+++ AAI++G DD+E+VEGD+EGTS V T PK+ ++ A+ G + GL + E DE E N+ ++AL EL+DVDSV+HNM+
Sbjct: 44 TTALFGRAAAVRAATKGKTDAKKAKTNALFGKKIIMAVKQGGSTDTNANRALAEVIKAAKANSVPVDNINRAIKRASETDTANFSESTFEAYGFGGASMVINCLSDNANRCTADVKSTVNKRGGKIAEQGSVLFMYDRKGKVEIPAVVDEEELLMAAIDAGCDDMELVEGDEEGTSVVYTDPKETNSMVDAVKAIGFEENVKMGLVYVTKAPVECTDEEFEKNMDIIDALEELDDVDSVEHNMS 287
BLAST of mRNA_P-littoralis_Contig211.98.1 vs. uniprot
Match: A0A4D9CWY6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWY6_9STRA) HSP 1 Score: 206 bits (524), Expect = 3.200e-58 Identity = 110/238 (46.22%), Postives = 160/238 (67.23%), Query Frame = 1
Query: 214 MGRRAAKIARVKGREDAKRGKTFARIGKKIIMAVKAGGPNEETNKALADTIREAKHNSVPKDNITRAIKRAVDGSQGDFKEVIYEAYGHGGTGIVVTALTDNVNRAIAEVKTVWRKQGLKQAAQGSVLFQFEKRGRVEVEGEADEEQVIEAAIESGVDDVEVVEGDDEGTSWVLTTPKDLMTLAGALSDAGIKGETGLAL-IPSGLAEVDDETMELNLAAVEALLELEDVDSVDHNMA 924
MGRRAAK A KG+ DA + K +A GKK++MAVKAGGP+ E N+ALA IREAK VP DN+ RAI+R + ++ D+KE +YEAYG+GG G+++ LTDN NRA E+ V +K +K A GSV F F+++GR+++ G +E+ V+EAA+E+ V+DV+ ++EG + VL P + +L G + + L + +P L + DE E N++ +EAL EL+DVDSV+HN+A
Sbjct: 6 MGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVA 243
BLAST of mRNA_P-littoralis_Contig211.98.1 vs. uniprot
Match: B7G276_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G276_PHATC) HSP 1 Score: 205 bits (521), Expect = 6.370e-58 Identity = 120/242 (49.59%), Postives = 160/242 (66.12%), Query Frame = 1
Query: 214 MGRRAAKIARVKGREDAKRGKTFARIGKKIIMAVKAGG-PNEETNKALADTIREAKHNSVPKDNITRAIKRAVDGSQGDFKEVIYEAYGHGGTGIVVTALTDNVNRAIAEVKTVWRKQGLKQAAQGSVLFQFEKRGRVEVEGEADEEQVIEAAIESGVDDVEVVEGDDEGTSWVLTTPKDLMTLAGALS----DAGIKGETGLALIPSGLAEVDDETMELNLAAVEALLELEDVDSVDHNMA 924
MGR AA A K + DAK+ KT A GKK+IMAVK GG P+ + NKALAD I+ AK NSVP DNI RAIK+A +G+ GDFKE +EAYG GG +++ LTDN NRA ++V+T K+ K A GSVLF ++++G +EV+ + DEE V+EAAIE+G DD E+ GD EGT+ + T P ++ + AL DAG K L + E DE + N+ +EAL +L+DVDSV+HNM+
Sbjct: 1 MGRAAAVRAATKNKTDAKKAKTNAVYGKKLIMAVKQGGSPDPKANKALADVIKGAKANSVPVDNINRAIKKASEGNVGDFKEATFEAYGFGGVSLIINVLTDNNNRATSDVRTAVNKRDGKIAESGSVLFMYDRKGMIEVQQDLDEEAVLEAAIEAGCDDYELSAGDVEGTTILYTDPSEVSMMFEALKSLGCDAGAK--MSLTYVTKAPVECSDEDFDKNMDIIEALEDLDDVDSVEHNMS 240
BLAST of mRNA_P-littoralis_Contig211.98.1 vs. uniprot
Match: K8ZBS2_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZBS2_NANGC) HSP 1 Score: 206 bits (524), Expect = 2.300e-57 Identity = 110/238 (46.22%), Postives = 160/238 (67.23%), Query Frame = 1
Query: 214 MGRRAAKIARVKGREDAKRGKTFARIGKKIIMAVKAGGPNEETNKALADTIREAKHNSVPKDNITRAIKRAVDGSQGDFKEVIYEAYGHGGTGIVVTALTDNVNRAIAEVKTVWRKQGLKQAAQGSVLFQFEKRGRVEVEGEADEEQVIEAAIESGVDDVEVVEGDDEGTSWVLTTPKDLMTLAGALSDAGIKGETGLAL-IPSGLAEVDDETMELNLAAVEALLELEDVDSVDHNMA 924
MGRRAAK A KG+ DA + K +A GKK++MAVKAGGP+ E N+ALA IREAK VP DN+ RAI+R + ++ D+KE +YEAYG+GG G+++ LTDN NRA E+ V +K +K A GSV F F+++GR+++ G +E+ V+EAA+E+ V+DV+ ++EG + VL P + +L G + + L + +P L + DE E N++ +EAL EL+DVDSV+HN+A
Sbjct: 72 MGRRAAKNAARKGKSDALKTKVYATYGKKLVMAVKAGGPDPEVNRALAVMIREAKAQGVPSDNVQRAIQRGSNANEADYKEAVYEAYGYGGAGLIINCLTDNTNRAKTEISNVIKKTDVKLATSGSVAFNFDRKGRIDLAGIVEEDAVLEAALEADVEDVDTRVNEEEGVTSVLVDPASVSSLREVFLGKGREIKASLMVNVPKLLMDCSDEDFEGNMSVIEALEELDDVDSVEHNVA 309 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig211.98.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig211.98.1 >prot_P-littoralis_Contig211.98.1 ID=prot_P-littoralis_Contig211.98.1|Name=mRNA_P-littoralis_Contig211.98.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=303bp MAPVISSARCLGCALLAAASSSVSAFMVPLASQGVYAGQRQHRSGWLLQQback to top mRNA from alignment at P-littoralis_Contig211:388621..397919- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig211.98.1 ID=mRNA_P-littoralis_Contig211.98.1|Name=mRNA_P-littoralis_Contig211.98.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9299bp|location=Sequence derived from alignment at P-littoralis_Contig211:388621..397919- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig211:388621..397919- >mRNA_P-littoralis_Contig211.98.1 ID=mRNA_P-littoralis_Contig211.98.1|Name=mRNA_P-littoralis_Contig211.98.1|organism=Pylaiella littoralis U1_48|type=CDS|length=909bp|location=Sequence derived from alignment at P-littoralis_Contig211:388621..397919- (Pylaiella littoralis U1_48)back to top |