mRNA_P-littoralis_Contig211.49.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig211.49.1 vs. uniprot
Match: D7FQ44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ44_ECTSI) HSP 1 Score: 242 bits (618), Expect = 1.320e-74 Identity = 114/125 (91.20%), Postives = 120/125 (96.00%), Query Frame = 3
Query: 69 MAETGYDPKRSKVSEDKLAEFIRSAVTGDITEVPGIATRGAEILAEGEGDERVTNTYQLIGKFLALRGPDKGDDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWVPGIYDADIYTD 443
MAE GYDPKRSKVS+DKLAEFIRSAVTGD+TEVPGIA RGAEILA+GEGD++VTNTYQLIGKFLALRGPDK DHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTW+PGIYDAD YTD
Sbjct: 1 MAEVGYDPKRSKVSDDKLAEFIRSAVTGDLTEVPGIAARGAEILADGEGDDKVTNTYQLIGKFLALRGPDK-TDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWIPGIYDADSYTD 124
BLAST of mRNA_P-littoralis_Contig211.49.1 vs. uniprot
Match: K0QZN8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZN8_THAOC) HSP 1 Score: 175 bits (444), Expect = 5.940e-49 Identity = 82/125 (65.60%), Postives = 101/125 (80.80%), Query Frame = 3
Query: 69 MAETGYDPKRSKVSEDKLAEFIRSAVTGDITEVPGIATRGAEILAEGEGDERVTNTYQLIGKFLALRGPDKGDDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWVPGIYDADIYTD 443
M+ GYDPKRS+VS+D L +FIR+ V GDITEVPGI A+ LAEGE DE +TNTYQLIGKFL L+GPD DD++V+S+EHC+KFWYWLQ K I+++RS IV AIA KVN +PG+YDAD+Y D
Sbjct: 1 MSAQGYDPKRSRVSDDSLMDFIRAQVQGDITEVPGIGPAAAKKLAEGEHDECITNTYQLIGKFLMLKGPDT-DDNKVESMEHCEKFWYWLQDKQISAHRSAIVKAIAMKVNGLLPGVYDADLYDD 124
BLAST of mRNA_P-littoralis_Contig211.49.1 vs. uniprot
Match: A0A835Z4N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N7_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.060e-47 Identity = 79/123 (64.23%), Postives = 96/123 (78.05%), Query Frame = 3
Query: 75 ETGYDPKRSKVSEDKLAEFIRSAVTGDITEVPGIATRGAEILAEGEGDERVTNTYQLIGKFLALRGPDKGDDH--EVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWVPGIYDADIY 437
E GYDPKRSKV+++KLAEFIR +TG++TEVPGI + LA GEG +V NTYQLIGKFL+L+G GDD + ++EHCD+FWYWL+ GI+S RSGIVNAIAEK NTW+PGIYD D Y
Sbjct: 4 EAGYDPKRSKVTDEKLAEFIRQPITGELTEVPGIGPAAVKKLAAGEGSNKVANTYQLIGKFLSLKG---GDDSGKTIQTIEHCDRFWYWLKEMGISSYRSGIVNAIAEKCNTWIPGIYDEDQY 123
BLAST of mRNA_P-littoralis_Contig211.49.1 vs. uniprot
Match: A0A7S2V4V0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V0_9STRA) HSP 1 Score: 170 bits (431), Expect = 5.330e-47 Identity = 77/125 (61.60%), Postives = 102/125 (81.60%), Query Frame = 3
Query: 69 MAETGYDPKRSKVSEDKLAEFIRSAVTGDITEVPGIATRGAEILAEGEGDERVTNTYQLIGKFLALRGPDKGDDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWVPGIYDADIYTD 443
MAE GYDPKRS +SED LA F+R+ +TGDIT+VPGI A LA + DE +TN++QLIGKFL ++GPD ++ EVD V HC+KFWY+L++KG+NS+RSGIV+AIAEK+NT +PGIYD+D++ D
Sbjct: 1 MAE-GYDPKRSSISEDALATFLRNPITGDITQVPGIGKAAAAALASADDDEPITNSFQLIGKFLLMKGPDT-EEGEVDCVMHCNKFWYYLKSKGVNSHRSGIVHAIAEKINTMIPGIYDSDVFED 123
BLAST of mRNA_P-littoralis_Contig211.49.1 vs. uniprot
Match: A0A7S1ZJR7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJR7_TRICV) HSP 1 Score: 168 bits (425), Expect = 6.520e-46 Identity = 79/125 (63.20%), Postives = 97/125 (77.60%), Query Frame = 3
Query: 63 RAMAETGYDPKRSKVSEDKLAEFIRSAVTGDITEVPGIATRGAEILAEGEGDERVTNTYQLIGKFLALRGPDKGDDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWVPGIYDADIY 437
R MAETGYDP+RS+VSED L +F+R +TG+ITEVPGI A+ LAEG+ D+RVTNT+QLIGKF+ L+GPD D+H+V EH KFW+WL K I S+RS IV AIAEK+N +PGIYDAD Y
Sbjct: 20 RKMAETGYDPRRSRVSEDTLNDFLRGKITGEITEVPGIGPAAAKRLAEGDDDDRVTNTWQLIGKFMMLKGPDD-DEHKVGPGEHMQKFWHWLAEKEIKSHRSAIVKAIAEKMNQMMPGIYDADAY 143
BLAST of mRNA_P-littoralis_Contig211.49.1 vs. uniprot
Match: A0A7S2R0A3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0A3_9STRA) HSP 1 Score: 161 bits (407), Expect = 1.590e-43 Identity = 72/122 (59.02%), Postives = 94/122 (77.05%), Query Frame = 3
Query: 81 GYDPKRSKVSEDKLAEFIRSAVTGDITEVPGIATRGAEILAEGEGD-ERVTNTYQLIGKFLALRGPDKGDDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWVPGIYDADIYTD 443
GYDP RSKVS+ + +F+RS +TGD+TEVPGI LA G+ + +R+TNT+QLIGKFL L+GPD+ DD ++D +EH +KFWYWL+ KGI S+RS IV AI EK+NT +PGIYDA IY +
Sbjct: 6 GYDPSRSKVSDSTMTDFLRSQITGDVTEVPGIGPAAKRALAGGDDESDRITNTFQLIGKFLMLKGPDE-DDMKIDCMEHMEKFWYWLKQKGIKSHRSAIVKAIGEKINTMIPGIYDASIYAE 126
BLAST of mRNA_P-littoralis_Contig211.49.1 vs. uniprot
Match: A0A2D4C4D0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4D0_PYTIN) HSP 1 Score: 154 bits (390), Expect = 3.110e-41 Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = 3
Query: 81 GYDPKRSKVSEDKLAEFIRSAVTGDITEVPGIATRGAEILAEGEGDERVTNTYQLIGKFLALR-GPDKGDDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWVPGIYDA 428
GYDP++S+V+ED LA+F+R+ +TGD+TEVPGI LA GE +RV NT+QLIGKFL L+ DK +D +D EHCD FWYWL++KGI + RSGIV AIAEKVNT +PGIYDA
Sbjct: 4 GYDPQKSRVAEDTLADFLRAPLTGDLTEVPGIGKAAVGKLAAGEEGDRVENTFQLIGKFLMLKQSTDKNEDGLIDCAEHCDAFWYWLKSKGIQAYRSGIVMAIAEKVNTMLPGIYDA 120
BLAST of mRNA_P-littoralis_Contig211.49.1 vs. uniprot
Match: A0A6U3Z2B1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z2B1_9STRA) HSP 1 Score: 154 bits (390), Expect = 4.120e-41 Identity = 78/129 (60.47%), Postives = 103/129 (79.84%), Query Frame = 3
Query: 69 MAETGYDPKRSKVSEDKLAEFIRSAVTGDITEVPGIATRGAEILAE-GEGD---ERVTNTYQLIGKFLALRGPDKGDDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWVPGIYDADIYTD 443
MAE GYDP+RSKVS+D A F R A++G++T+VPGI A+ L + G+G+ +RVTNTYQLIGKFL L+GPD+ D ++V+SVEH +KFW++L+ KGI+S+RSGIV AIAEKVNT +PGIYDA Y +
Sbjct: 1 MAE-GYDPRRSKVSDDTFASFQRDALSGELTDVPGIGPAAAKKLGQIGDGETEFDRVTNTYQLIGKFLMLKGPDE-DGNKVESVEHMEKFWWYLKQKGISSHRSGIVRAIAEKVNTMLPGIYDASEYEE 127
BLAST of mRNA_P-littoralis_Contig211.49.1 vs. uniprot
Match: A0A7S2UIU1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIU1_9STRA) HSP 1 Score: 154 bits (389), Expect = 5.550e-41 Identity = 72/126 (57.14%), Postives = 96/126 (76.19%), Query Frame = 3
Query: 69 MAETGYDPKRSKVSEDKLAEFIRSAVTGDITEVPGIATRGAEILAEGEG-DERVTNTYQLIGKFLALRGPDKGDDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWVPGIYDADIYTD 443
M + GYDP+RS+VSED F+R +TG ITEVPGI + AE LA + D+R+TNTYQLIGKFL L+GPD D+++V S++H +KFWY+L+ +GI S+RS IV AIAEK+N ++PGIY+ D Y D
Sbjct: 1 MGDAGYDPRRSRVSEDTFQNFVRGNITGVITEVPGIGPKAAEKLAASDDTDDRITNTYQLIGKFLMLKGPDD-DENKVASMQHMEKFWYYLKERGIASHRSAIVKAIAEKMNMFIPGIYERDCYGD 125
BLAST of mRNA_P-littoralis_Contig211.49.1 vs. uniprot
Match: A0A7S0C1K8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1K8_9STRA) HSP 1 Score: 154 bits (388), Expect = 6.600e-41 Identity = 72/125 (57.60%), Postives = 96/125 (76.80%), Query Frame = 3
Query: 69 MAETGYDPKRSKVSEDKLAEFIRSAVTGDITEVPGIATRGAEILAEGEGDERVTNTYQLIGKFLALRGPDKGDDHEVDSVEHCDKFWYWLQAKGINSNRSGIVNAIAEKVNTWVPGIYDADIYTD 443
MA+ GYDPKRS+VSE + +FIR ++G+ITEVPGI A+ LAE D++VTNTYQL GKFL+L+GPDK VD VEH +KFWYWL+ +GI+++RS +V AIAEK+N+ + G+YDA+ Y D
Sbjct: 1 MADEGYDPKRSRVSESTMGDFIRGEISGEITEVPGIGPAAAKKLAES--DDQVTNTYQLFGKFLSLKGPDK-----VDPVEHMEKFWYWLKDQGISAHRSAVVRAIAEKMNSMMNGLYDAEAYGD 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig211.49.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig211.49.1 >prot_P-littoralis_Contig211.49.1 ID=prot_P-littoralis_Contig211.49.1|Name=mRNA_P-littoralis_Contig211.49.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=126bp MAETGYDPKRSKVSEDKLAEFIRSAVTGDITEVPGIATRGAEILAEGEGDback to top mRNA from alignment at P-littoralis_Contig211:161315..170243- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig211.49.1 ID=mRNA_P-littoralis_Contig211.49.1|Name=mRNA_P-littoralis_Contig211.49.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8929bp|location=Sequence derived from alignment at P-littoralis_Contig211:161315..170243- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig211:161315..170243- >mRNA_P-littoralis_Contig211.49.1 ID=mRNA_P-littoralis_Contig211.49.1|Name=mRNA_P-littoralis_Contig211.49.1|organism=Pylaiella littoralis U1_48|type=CDS|length=378bp|location=Sequence derived from alignment at P-littoralis_Contig211:161315..170243- (Pylaiella littoralis U1_48)back to top |