mRNA_P-littoralis_Contig211.17.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig211.17.1
Unique NamemRNA_P-littoralis_Contig211.17.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig211.17.1 vs. uniprot
Match: D7FQ27_ECTSI (Chorismate mutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ27_ECTSI)

HSP 1 Score: 516 bits (1330), Expect = 2.380e-180
Identity = 291/427 (68.15%), Postives = 318/427 (74.47%), Query Frame = 1
Query:    1 MSFCTLPSAAGRRIVLPKTTTPGGIPVSSSXXXXXXXXXXXGSRGGAGEMKIAAGQQDILGVHGADVAQPGSNDTVKAEPSSLPLPPREEPPDAAA----GVDSNVISSADIIRGKRANSAA--------TKDVINRKPPLVARSLDSVRGSLIRQEETIIFALIEREQFRSNAAIYTERTFRVNRSDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILQRYVSEIVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKMYQELCRAGDVLGVLELLTNKAVEERVLQRAFMKASTYGSDI-DLPVSSPGDGEKSGGGGEGGVGAAKGERNFKVEPQTIVNIYRDTVIPLTKDVEILYLFQRTGYPCPSLAGIHDV 1242
            MSF T+  A  RR   P T  P                   G+  G G   IAAG+QD+LGV+G DV QP S++ ++ EPSS         PD AA    G ++N     + +R                T D  NR+P    RSL+SVRGSLIRQEETIIFALIEREQFR N AIYT+RTFRVNRSDAADIYGRDASFLEYML ETEKLHATVRRY SLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQIL+RYVSEIVPMICEPGDD+QHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSK YQ+LCRAGD  GVLELLTNKAVEE+VL+RAFMKASTYGSDI D+PVS+           +GG GAAK E+NFKV PQ IV+IYRDTVIPLTKDVEILYLFQRTGYPCPSL GIHD+
Sbjct:    1 MSFYTMSPAVVRRTGFPTTVVPSA--------------GAAGAAAGGGVTGIAAGRQDMLGVNGVDVLQPESSEDLEEEPSS------SLSPDIAALNNSGSNANNGGRTNRVRXXXXXXXXXXXXXXXXTADARNRQP---TRSLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRSDAADIYGRDASFLEYMLSETEKLHATVRRYMSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKTYQDLCRAGDARGVLELLTNKAVEEKVLKRAFMKASTYGSDINDVPVSTED--------AKGGDGAAKAEQNFKVNPQFIVDIYRDTVIPLTKDVEILYLFQRTGYPCPSLEGIHDI 396          
BLAST of mRNA_P-littoralis_Contig211.17.1 vs. uniprot
Match: A0A836CAA2_9STRA (Chorismate mutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA2_9STRA)

HSP 1 Score: 305 bits (780), Expect = 1.750e-99
Identity = 150/243 (61.73%), Postives = 182/243 (74.90%), Query Frame = 1
Query:  511 RVNRSDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILQRYVSEIVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKMYQELCRAGDVLGVLELLTNKAVEERVLQRAFMKASTYGSDIDLPVSSPGDGEKSGGGGEGGVGAAKGERNFKVEPQTIVNIYRDTVIPLTKDVEILYLFQRTGYPCPSLAGIHD 1239
            R++R  +  ++ RDA+F+EY+LCETEK+HA VRRY S EEL FFP FLP P+LPPLDFP++LAPN VN+ND +L+RYV+E+VP IC  GDDEQHGSSV+CD+NALQALSRRVH GKFVAESKFQED  +Y+ LC  G+  GV ELLTNKAVE++V++RA  KA+ Y  +I                 EG  G+      FKV P+ I  IY+D +IPLTKDVEILYLFQRTGY CPSLAGIHD
Sbjct:    2 RLHRQGSNTVFDRDATFVEYVLCETEKVHARVRRYMSPEELPFFPGFLPAPLLPPLDFPQILAPNSVNINDTLLKRYVAEVVPAICGAGDDEQHGSSVLCDINALQALSRRVHFGKFVAESKFQEDGDLYRNLCSEGNARGVNELLTNKAVEKKVIERALNKATAYAQEITW---------------EGAAGS-----RFKVRPEAISAIYKDIIIPLTKDVEILYLFQRTGYTCPSLAGIHD 224          
BLAST of mRNA_P-littoralis_Contig211.17.1 vs. uniprot
Match: A0A4D9CWZ2_9STRA (Chorismate mutase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWZ2_9STRA)

HSP 1 Score: 291 bits (745), Expect = 1.610e-93
Identity = 159/276 (57.61%), Postives = 188/276 (68.12%), Query Frame = 1
Query:  397 SLDSVRGSLIRQEETIIFALIEREQFRSNAAIYTERTFRVNRSDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILQRYVSEIVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKMYQELCRAGDVLGVLELLTNKAVEERVLQRAFMKASTYGSDIDLPVSSPGDGEKSGGGGEGGVGAAKGERNF-KVEPQTIVNIYRDTVIPLTKDVEILYLFQRTGYPCPS 1221
            SLDS+R +LIRQE++IIFALIER QFR N AIY +   +++ S     + +  SFLEY+L ETEKLH  VRRYTS EE AFFP  LP+PIL PL FP LLAPN V+VN QIL  Y++E+VP +C+ GDDEQHGSSV+ D+  LQALSRR+HLGKFVAE+KFQED   Y+ L  A DV GV+ LLTN AVE RVL RA +KASTYG DI                         GE    KVEP  I  IYRD +IPLTKDVE+LYLF+R G   P+
Sbjct:    2 SLDSIRSTLIRQEDSIIFALIERAQFRQNQAIYAKGILQLDPSIPDYPFLKTLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPDPILTPLQFPALLAPNTVDVNAQILHLYINEVVPAVCKEGDDEQHGSSVLADITLLQALSRRIHLGKFVAETKFQEDEAKYRALVGADDVDGVMSLLTNSAVEARVLARAKLKASTYGQDI------------------------MGETEACKVEPDVIAAIYRDVIIPLTKDVEVLYLFERVGRKPPA 253          
BLAST of mRNA_P-littoralis_Contig211.17.1 vs. uniprot
Match: W7U1H9_9STRA (Chorismate mutase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1H9_9STRA)

HSP 1 Score: 292 bits (747), Expect = 1.520e-91
Identity = 166/313 (53.04%), Postives = 202/313 (64.54%), Query Frame = 1
Query:  286 AGVDSNVISSADIIRGKRANSAATKDVINRKPPLVARSLDSVRGSLIRQEETIIFALIEREQFRSNAAIYTERTFRVNRSDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILQRYVSEIVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKMYQELCRAGDVLGVLELLTNKAVEERVLQRAFMKASTYGSDIDLPVSSPGDGEKSGGGGEGGVGAAKGERNF-KVEPQTIVNIYRDTVIPLTKDVEILYLFQRTGYPCPS 1221
            A  D +V S++ I    R NS +          ++  SLDS+R +LIRQE++IIFALIER QFR N AIY +   +++ S     + +  SFLEY+L ETEKLH  VRRYTS EE AFFP  LP+PIL PL FP LLAPN V+VN QIL  Y++E+VP +C+ GDDEQHGSSV+ D+  LQALSRR+HLGKFVAE+KFQE+   Y+ L  A DV GV+ LLTN AVE RVL RA +KASTYG DI                         GE    KVEP  I  IYRD +IPLTKDVE+LYLF+R G   P+
Sbjct:  133 ASEDGSVPSASFISTSSRVNSPSAVSASTTTADVM--SLDSIRSTLIRQEDSIIFALIERAQFRQNQAIYAKGILQLDPSIPDYPFLKTLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPDPILTPLQFPALLAPNTVDVNAQILHLYINEVVPAVCKEGDDEQHGSSVLADITLLQALSRRIHLGKFVAETKFQEEEAKYRALVGADDVDGVMSLLTNSAVEARVLARAKLKASTYGQDI------------------------MGETEACKVEPDVIAAIYRDVIIPLTKDVEVLYLFERVGRKPPA 419          
BLAST of mRNA_P-littoralis_Contig211.17.1 vs. uniprot
Match: A0A6U1P8R8_9STRA (Chorismate mutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1P8R8_9STRA)

HSP 1 Score: 285 bits (728), Expect = 1.260e-89
Identity = 154/282 (54.61%), Postives = 190/282 (67.38%), Query Frame = 1
Query:  397 SLDSVRGSLIRQEETIIFALIEREQFRSNAAIYTERTFRVNRSDAADIYGR-DASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILQRYVSEIVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKMYQELCRAGDVLGVLELLTNKAVEERVLQRAFMKASTYGSDIDLPVSSPGDGEKSGGGGEGGVGAAKGERNFKVEPQTIVNIYRDTVIPLTKDVEILYLFQRTGYPCPSLAGIHD 1239
            SL+S+R +LIRQEETIIFA+IER Q+  N   Y    +++          R  ASFLEY L ETEKLHA VRRYTS EE  FF   +P PILP L+FP LL P+ VN+N  IL+RYV E+VP IC  GDDEQ+GS+ + D+ ALQALSRR+H G FVAESKF ++   Y+ L RAGD  GV +LLTN +VEE VLQRAF KASTYG DI    ++ GD E +                +KVEP+ I  +Y+  +IPLTK+VE+LYLF+R G PCP L+GIHD
Sbjct:  106 SLNSIRRTLIRQEETIIFAMIERAQYLQNNRNYESGPYKLIPEGLDGAKERTQASFLEYFLFETEKLHARVRRYTSPEEYPFFADMIPPPILPLLNFPHLLQPHSVNLNHVILKRYVDEVVPRICSAGDDEQYGSTALADITALQALSRRIHYGLFVAESKFLDNPSQYEALVRAGDAKGVYDLLTNASVEELVLQRAFRKASTYGQDI----TATGDPETT---------------EYKVEPRIIRGLYKSVIIPLTKEVEVLYLFERVGCPCPDLSGIHD 368          
BLAST of mRNA_P-littoralis_Contig211.17.1 vs. uniprot
Match: A0A7S2SIA4_9STRA (Chorismate mutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIA4_9STRA)

HSP 1 Score: 249 bits (636), Expect = 2.000e-76
Identity = 137/273 (50.18%), Postives = 175/273 (64.10%), Query Frame = 1
Query:  397 SLDSVRGSLIRQEETIIFALIEREQFRSNAAIYTERTFRVNRSDAAD--IYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLP-EPILPPLDFPRLLAPNDVNVNDQILQRYVSEIVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKMYQELCRAGDVLGVLELLTNKAVEERVLQRAFMKASTYGSDIDLPVSSPGDGEKSGGGGEGGVGAAKGERNFKVEPQTIVNIYRDTVIPLTKDVEILYLFQRTG 1206
            SL SVR SLIRQEETIIFALIER QF  N  IY ER  +   S+  D  I  +  SFL +ML ETEKLHA  RRY S EE  FFP  L  +P+L PLD+P ++   D+N+ND+I+  Y+ ++VP IC+PGDD+Q+GSS +CD+  LQALSRR+H+GKFVAESKFQ + +++ +L  A D+ G+  LLTN+ VEERV  RA +KA T+G D                     VG       FKV P  +  +YRD +IPLTK V++ YLF R G
Sbjct:   28 SLASVRKSLIRQEETIIFALIERAQFVQNQRIY-ERGAQAWSSEEVDPWICDKQGSFLNFMLLETEKLHARARRYMSPEEHPFFPQVLDIDPVLAPLDYPPVVISQDININDEIMSLYIDKVVPSICDPGDDQQYGSSALCDIACLQALSRRIHIGKFVAESKFQHEPELFTKLVEARDIEGINRLLTNELVEERVCHRARLKAVTFGQDAFSDTD---------------VG-------FKVAPHKLFELYRDMIIPLTKQVQVRYLFDRVG 277          
BLAST of mRNA_P-littoralis_Contig211.17.1 vs. uniprot
Match: B7FR81_PHATC (Chorismate mutase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FR81_PHATC)

HSP 1 Score: 243 bits (619), Expect = 3.260e-74
Identity = 144/284 (50.70%), Postives = 183/284 (64.44%), Query Frame = 1
Query:  397 SLDSVRGSLIRQEETIIFALIEREQFRSNAAIYTERTFRVNRSD--AADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPE---PILPPLDFPRLLAPN-----DVNVNDQILQRYVSEIVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKMYQELCRAGDVLGVLELLTNKAVEERVLQRAFMKASTYGSDIDLPVSSPGDGEKSGGGGEGGVGAAKGERNFKVEPQTIVNIYRDTVIPLTKDVEILYLFQRTGYPCP 1218
            SLDS+R SLIRQEETIIFALIER QFR N  +Y +  F    +   +  +   D SF+EYML  TE LH  VRRYTS EE AFFP  LP      LP L++P+ L  +     D+N N  +LQ YV +IVP + + GDDEQHGS+V+CD+ ALQALSRR+H GKFVAESKF+ D   YQ+L  A D  GV++LLTN  VEE+V++RA +KA+TYG++  L    P  G  +       V AA      K++P  I ++YRD VIPLTK +E+ YLF+R G   P
Sbjct:   16 SLDSIRSSLIRQEETIIFALIERAQFRQNEIVYRKGGFGNLGTPVGSTSVDDHDLSFMEYMLVGTEALHCGVRRYTSPEEQAFFPERLPYGQMDALPLLEYPQELLSSVGGACDLNFNKALLQNYVEKIVPSVSQQGDDEQHGSTVLCDIAALQALSRRIHYGKFVAESKFRSDPSGYQQLVDANDADGVMKLLTNTVVEEKVIRRAKLKAATYGTEPLLSEMPPIKGADT----TSIVAAAAAPG--KIDPTVIESVYRDIVIPLTKVIEVAYLFRRCGREPP 293          
BLAST of mRNA_P-littoralis_Contig211.17.1 vs. uniprot
Match: M2X1P6_GALSU (Chorismate mutase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X1P6_GALSU)

HSP 1 Score: 240 bits (612), Expect = 8.620e-73
Identity = 136/289 (47.06%), Postives = 174/289 (60.21%), Query Frame = 1
Query:  334 KRANSAATKDVINRKPPLVARSLDSVRGSLIRQEETIIFALIEREQFRSNAAIYTERTFRVNRSDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILQRYVSEIVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKMYQELCRAGDVLGVLELLTNKAVEERVLQRAFMKASTYGSDIDLPVSSPGDGEKSGGGGEGGVGAAKGERNFKVEPQTIVNIYRDTVIPLTKDVEILYLFQR 1200
            +R +S+     I   PP     L+ +R  LIRQEE+IIFAL+ER QF +N  IY        R    +I G   SF E++LCE EK +A VRRYTS +E AFFP  LPEPILPPL FP  + PN +N+N +I   YV +IVP+ICE GDD+ +GSS + DV  LQA+S+R+H GKF+AE+KF E+   Y +  R GD   + ELLT+  VE+R+ +R   KAS YG DID                    GA      +KVEPQ I  +YR  +IPLTK VE+LYL QR
Sbjct:   62 RRRSSSPDYHGIPNPPPGERLKLEDLRERLIRQEESIIFALVERAQFMTNDVIY--------RPGGIEIPGFSGSFTEFLLCELEKGYALVRRYTSPDEQAFFPDILPEPILPPLSFPETIVPNTINLNSKIYDVYVQDIVPVICEAGDDQNYGSSAMYDVACLQAISKRIHYGKFIAEAKFGENPLEYSKHIRNGDTNALNELLTDPQVEKRLAKRVINKASAYGRDID------------------DSGALD---TYKVEPQIIAELYRKHIIPLTKQVEVLYLLQR 321          
BLAST of mRNA_P-littoralis_Contig211.17.1 vs. uniprot
Match: A0A6G0XKS1_9STRA (Chorismate mutase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKS1_9STRA)

HSP 1 Score: 246 bits (629), Expect = 8.920e-73
Identity = 134/283 (47.35%), Postives = 178/283 (62.90%), Query Frame = 1
Query:  400 LDSVRGSLIRQEETIIFALIEREQFRSNAAIYTERTFRVNRSDA-----ADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILQRYVSEIVPMICEPGDDEQ-HGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKMYQELCRAGDVLGVLELLTNKAVEERVLQRAFMKASTYGSDIDLPVSSPGDGEKSGGGGEGGVGAAKGERNFKVEPQTIVNIYRDTVIPLTKDVEILYLFQRTGYPCPSLAG 1230
            LD  R  LIRQEETIIFALIER QF  N AIY +R      SDA        +    SFL++ML ETE+LHA  RRYTS +E AFFP FLP+PILPPLD+P +L PN +N+NDQ++  Y+ +++P I    DD   +GS+   D+ ALQALS+R+H GKF+AE+KFQ +++ Y EL R  D  G+++ LTN AVE++V  R  +KASTYG D++   SS                      + K++PQ I ++YRD V+PLTK V++ YL QR  +P  S  G
Sbjct:    7 LDDFRNDLIRQEETIIFALIERAQFVHNRAIYRKRE---EASDALLSFKGKYHSFQGSFLDFMLTETERLHALNRRYTSPDEHAFFPAFLPDPILPPLDYPPVLIPNKININDQVMNVYLEKLLPNITVDDDDHTTYGSTANADIAALQALSKRIHFGKFIAEAKFQAETERYTELIRNNDADGIMDALTNLAVEDKVAMRVRLKASTYGQDVEGSASS-------------------NTGHCKIDPQVISDLYRDFVMPLTKQVQVAYLLQRLHHPSVSFVG 267          
BLAST of mRNA_P-littoralis_Contig211.17.1 vs. uniprot
Match: D8TUV0_VOLCA (Chorismate mutase (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TUV0_VOLCA)

HSP 1 Score: 237 bits (605), Expect = 1.640e-72
Identity = 132/272 (48.53%), Postives = 176/272 (64.71%), Query Frame = 1
Query:  391 ARSLDSVRGSLIRQEETIIFALIEREQFRSNAAIYTERTFRVNRSDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLL--APNDVNVNDQILQRYVSEIVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKMYQELCRAGDVLGVLELLTNKAVEERVLQRAFMKASTYGSDIDLPVSSPGDGEKSGGGGEGGVGAAKGERNFKVEPQTIVNIYRDTVIPLTKDVEILYLFQR 1200
            A SL ++R SLIRQE+TIIF+ IER QF  N  +YT     V   D     GR  S LEY+L ETE+LH +VRRYTS +E AFFP  LP  +LPP+ +P +L    + +N+ND+IL+ YV +I+P +  PGDD  +GSS   DV  LQALS+R+H GKFVAE+KF    + Y  L RAGD  G++ELLT++ VE RV++R   KA+T+G DI    + P  G  +GGGG+   G        KV P+ +  +Y D V+PLTKDVE++YL +R
Sbjct:    5 ALSLANIRSSLIRQEDTIIFSFIERAQFARNLPVYTPDAIPVPGFDRC---GRRYSLLEYVLRETEQLHGSVRRYTSPDEHAFFPDELPPLVLPPITYPSVLHSCADVININDRILRIYVDDILPGLTAPGDDFNYGSSATLDVTCLQALSKRIHFGKFVAEAKFLSKPEEYGALIRAGDADGIMELLTDRRVERRVVERVRRKAATFGLDITENGALPPAGGSNGGGGDAEAGP-----RLKVSPELVARVYEDIVMPLTKDVEVMYLLRR 268          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig211.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ27_ECTSI2.380e-18068.15Chorismate mutase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A836CAA2_9STRA1.750e-9961.73Chorismate mutase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A4D9CWZ2_9STRA1.610e-9357.61Chorismate mutase n=1 Tax=Nannochloropsis salina C... [more]
W7U1H9_9STRA1.520e-9153.04Chorismate mutase n=1 Tax=Nannochloropsis gaditana... [more]
A0A6U1P8R8_9STRA1.260e-8954.61Chorismate mutase n=1 Tax=Fibrocapsa japonica TaxI... [more]
A0A7S2SIA4_9STRA2.000e-7650.18Chorismate mutase n=1 Tax=Rhizochromulina marina T... [more]
B7FR81_PHATC3.260e-7450.70Chorismate mutase n=3 Tax=Phaeodactylum tricornutu... [more]
M2X1P6_GALSU8.620e-7347.06Chorismate mutase n=1 Tax=Galdieria sulphuraria Ta... [more]
A0A6G0XKS1_9STRA8.920e-7347.35Chorismate mutase n=1 Tax=Aphanomyces euteiches Ta... [more]
D8TUV0_VOLCA1.640e-7248.53Chorismate mutase (Fragment) n=1 Tax=Volvox carter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig211contigP-littoralis_Contig211:38492..44512 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQ27
Preferred nameARO7
PFAMsPDT
Model size1245
Max annot lvl2759|Eukaryota
KEGG rclassRC03116
KEGG koko:K01850
KEGG ReactionR01715
KEGG Pathwayko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230
KEGG ModuleM00024,M00025
Hectar predicted targeting categorymitochondrion
GOsGO:0000162,GO:0003674,GO:0003824,GO:0004106,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006568,GO:0006570,GO:0006571,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016866,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223
Exons4
Evalue3.91e-181
EggNOG OGsCOG1605@1|root,KOG0795@2759|Eukaryota
Ec32 ortholog descriptionChorismate Mutase
Ec32 orthologEc-01_007700.1
EC5.4.99.5
Descriptionchorismate mutase activity
Cds size1245
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790031.563482-CDS-P-littoralis_Contig211:38491..388541680790031.563482-CDS-P-littoralis_Contig211:38491..38854Pylaiella littoralis U1_48CDSP-littoralis_Contig211 38492..38854 -
1680790031.5752678-CDS-P-littoralis_Contig211:39412..395571680790031.5752678-CDS-P-littoralis_Contig211:39412..39557Pylaiella littoralis U1_48CDSP-littoralis_Contig211 39413..39557 -
1680790031.585016-CDS-P-littoralis_Contig211:40174..403071680790031.585016-CDS-P-littoralis_Contig211:40174..40307Pylaiella littoralis U1_48CDSP-littoralis_Contig211 40175..40307 -
1680790031.5999072-CDS-P-littoralis_Contig211:43908..445121680790031.5999072-CDS-P-littoralis_Contig211:43908..44512Pylaiella littoralis U1_48CDSP-littoralis_Contig211 43909..44512 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig211.17.1prot_P-littoralis_Contig211.17.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig211 38492..44512 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig211.17.1

>prot_P-littoralis_Contig211.17.1 ID=prot_P-littoralis_Contig211.17.1|Name=mRNA_P-littoralis_Contig211.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=415bp
MSFCTLPSAAGRRIVLPKTTTPGGIPVSSSSSSSSISSRSSGSRGGAGEM
KIAAGQQDILGVHGADVAQPGSNDTVKAEPSSLPLPPREEPPDAAAGVDS
NVISSADIIRGKRANSAATKDVINRKPPLVARSLDSVRGSLIRQEETIIF
ALIEREQFRSNAAIYTERTFRVNRSDAADIYGRDASFLEYMLCETEKLHA
TVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILQRYVSE
IVPMICEPGDDEQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKMY
QELCRAGDVLGVLELLTNKAVEERVLQRAFMKASTYGSDIDLPVSSPGDG
EKSGGGGEGGVGAAKGERNFKVEPQTIVNIYRDTVIPLTKDVEILYLFQR
TGYPCPSLAGIHDV*
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mRNA from alignment at P-littoralis_Contig211:38492..44512-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig211.17.1 ID=mRNA_P-littoralis_Contig211.17.1|Name=mRNA_P-littoralis_Contig211.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6021bp|location=Sequence derived from alignment at P-littoralis_Contig211:38492..44512- (Pylaiella littoralis U1_48)
ATGTCGTTTTGCACGCTTCCGTCGGCAGCGGGCCGGCGAATCGTCCTCCC CAAAACGACAACACCAGGAGGTATACCTGTGTCGTCGTCGTCGTCGTCGT CGAGCATCAGCAGCAGGAGTTCGGGATCACGAGGAGGAGCAGGAGAGATG AAGATCGCAGCTGGGCAGCAGGACATCCTTGGTGTGCACGGTGCTGACGT TGCGCAACCTGGTTCGAACGATACTGTCAAGGCAGAGCCTTCATCATTGC CACTTCCGCCGAGAGAGGAACCGCCAGACGCAGCAGCTGGGGTCGACAGC AACGTCATCAGCAGTGCAGATATCATCAGGGGCAAGCGAGCCAACTCCGC GGCCACCAAGGATGTCATCAACCGGAAGCCTCCATTGGTGGCGCGGAGTC TGGACAGCGTGCGGGGGTCGCTGATCCGGCAGGAGGAGACAATCATTTTT GCGCTGATCGAGAGGGAGCAGTTCCGCAGCAACGCGGCCATATACACTGA GAGAACCTTCCGGGTGAACCGCAGCGACGCGGCCGACATTTACGGCCGAG ATGCGAGCTTCTTGGAGTACATGCTGTGCGAGACGGAGAAGCTGCACGCG ACAGGTGTGTTTGTATGGGGTGTGTTTTTTTTCACAGGCACCCGCGCTCA GGCACCGCTCCTATGTGCCGCCGTGCTCTGTACTCCCAACGACCAACAGC ATGTCTTACCGAGAGTAAATGCGGCTTTTTTTTTTTTTAACTTACAAAAA TAGTACACGTACGGAGAATCCTTCAACCTGTCTCCTTTGGAACATGTATA CCACCCGCCAACGTCTTCATGCACCATCACTCCATCAGTATCTTCACGCC GGGTTATTCTTCTCATATAGTGTGGGATGAAACGGCGGCATCACCTCCCG CTAGGTTGGTGTTGCCACCTGTCGTGAAAGGAAGCGCTGATGATGAGTGT GCGATCGAGATCACCATATAATGTACCTCCTGTTTGTCTCACATCGATAC TTACACACTCATATCTCCTTTTTTATTTTATTTTTGTCTTTCGTCTGTTG ATCATGTAGTTACTGGGCCATCGCCCTGGTTTGCGTCTGCTTTGGTCTGT CATGGCCCTGGGCCCTGGTTCGATGCACGAAGTACTTCGAAGTATATGGT TATGGTTGAGGTTTGTCTTGGTTATTTTTTGTTTGTCGGACTGTTTCCAA TTTTTGTTTTTCTTTCGAGCCTGTTATTATTTTTTCTGTATTTGTTTGGT ATCCTGGCCACCACAGATGGTACCCCAACGGTACCACGTCTGATCTGACT GTGGGTGATCATAGTCCATATATTTTATTTTTTTATTTTTTTTCCTCCTA GCACGATATGTGCCTGGTTTGTGACCACGGGCTAGACTGCGGCGGTAGTG AGCTAATGTGAGAATCAACAACAACAACTCACTCACCCACGCTCCTTTGC GACAGTTTTTGTAAGAATAAACCGCGTAATATACGCTCCTTAATCTTGTA TGGGTGGGTGGTTGGTGCTTCAAATGTGCTCTCTCTTGTCTGCTGTTTGG CGTGTCGGCACTTGGTGCCCCCAGCGAAGTGAGAGCCATTACTGCCGTCT CGTGATCACCGCTTTCTTATGGGAACGGTCCTAGAAATTGTTGAGGATAT TCCTACTCCCGGTTCTTAGAATACAGGAGGACTACTACCGTATTCTACAC AAGATACCACACCCCGTGTTAGGTTTTTTGCATTCCGTATTGCTCCACAA CCAGGAGGGTGCGAACACCAAACAGCCCGTCATACAAAAGCTCTCGACGA GATCTTTCCAAAACCACCCTTTTCGGCAGTGGCACCCTCCTGGTTGTGGA GCTATACGGAATGCAAAAAGCTTAACACGGGGTGTGTTATCTTGTGTAGA ATACGGTACGACTACAACGGCCGCGCCAAAACTAAGGCAAAACAAAAGAG GATTTCTATTACACATGTATCATCCATATTATGTACAAGGGAAGTACTAT GAAATATGTAGGTAGTACATACCAAAATAAGCACGAAGAAGTAAGAAATG TATGGAACAGGGCGCTCTAGGTTAGGTACTGTATTTTGTTTACAGGGTAG GTACTTTGTTTACATTCTAGAATGCAAATAATATACTTCGTACCACGGAA GAAAAACGTCAACTTACTTCAACCCACGCCACCAACAAAGGTTCAAAAAA TGTTATTATTGCGAAAATATACCTACACACACACCCACACAGCAGTTCCG CTGTTTAGTACTGCTGTGAAATTTTAGTTATATACCTCGAAGTACCATAT TACTACTGGTGTTGTGTATACGAACAATTGGACAGCAGGTTGAAAAAGTA TTTTAACTAAAGGGATGCGTTTTACTCCGTATTAGAGAGTTTGCGAAAAA GAATATCTCATCTCAAATATCCTTTCTTGGAAAAAATAAATAATAAGCGC CGTGAATAAGAATTCCTTTTAACGAAAATTTGAAAATGAGTTTGCGAAAT AGATTATCCTTTCTGACATAAACACCTAGTCTACACTTAGCTGTGAGAGT GCAGAGCAACACAAATACAAACACACACACACACGGCTGATGATGTGCTG CTGCTGCTGTAGAGACAACACAATGAGTCTTTCGTTCAAGTGGTGGTGAA GGGTGCCGGGTCAAGCGAAGTAAATGCAAAGTCAGGGGTCATGGGCAGCA GGGACGGGGCAAGTTCGGCAGAAAGGCTGTGTTATTGTGGAGTAATGCCT CACTGCTGCGTGTCAACTGCTGTTCTATTTTGGCCCGCCTGTTTTCATGT GCGAAAAACACCTTGAAAGTTCAGCACCAATAGCAGTATACTTTCTGAAT ACAGCCTTGTTTTTCCAGCGTGGCTGGCCAGACCTCGAGCGATGCTTCTG CTTCTCTCCACCGATTGAATGAGCCCACCTCCAACCCAACCTCCTGCGGG CGGAGAGCACTATATGAAGGAGACAGCCAAGAAGTGTTCACCTTGATATG TGGTGTAGAGAGCGAGAGTGTGACTGCCGTGATGTTTCTGATGTCTGTCG CGTTCAACTGCTTTGTGCCTCTGGGGACGCGCGCCAGCCCACACTTAATA CTGTCAAAGAGTCGCTGCTCAGACGATATGTTTTACATGGCTGGCACACT TCCACCACATGAACCAGCGGCGAAGGTGTTGGCACAGTGACTACAGGGTT GCACGGAACCCTCTTTGAGCTCGCTACCTTATGAAATCACGGGGCAGTGG TCGGTGCTGTCGACTGAAGCGTAGTGGTGTATCGCCATCTTGTCGCATAT CACACCGTCCGGGTGATGCCGAGGTGATTTGGCCAATCACACGATGTGCC GGCACAGGCTCCCTTGCCAGATCAAATATTATTTTCACATATCTTTTCTT CCCGGGAATTTCCGGAATTTGAGATAAAATATTCTTTTTGGTACAGCCAC GGGGCCTCTCGGGGGAACCTCGGGGAAACCAAGAAAGGATATGTGAGATA AGATATTTTATTTCGCAAACTCTCCATTCAATTCATATGGAACTTCAAAC TGAAAACCAATTATTTACATGTACATAAAAATGAAGACCAACAAACCTGA AAACAAACACTATAGATCGTACATACTCACCACATAATGTATCGTGTGTC ACACAAGACGACTACCAAATTGTCTTGTTGAGCCTGATAACCTCAGGGGA GCTGCAACGGTATGTCATCTGTTGAGTTATAGAAACACAGGTAGATGTAT TACTCACTGCTGTGTTCGTTGCTAATCTTGCTGGATCCTCGTCTAGGGAG AGGCGAACACAATGATGTCTTGGTAAGAAGAAGAAAAAAAACATCAATGT GTTCGCCTCTCTCCAGACAAGGATCTGGAGCAGATATTGCAACGAACACA AAGAGTGAAATACGTCTACCAGTGTTTCTATACTCAGCAGACAATGTACC GTTGCAGCTCCCCTGAGGGTATCAGGCTCAACGAGACAATTTGGTGGTCG TCTTGTGTGACACACGCTACACCATGTGTTGAGTGTTTACGATCTATATT TGTGCTGCTTGCATCATCCTTGGCATAGTGATGGTGGTGATTTGATGTTT TTCGTGCAGCAGTAGATTTGACGTTCCTACAGACAAGAACACCGTTTTGA TTCCACAAATATATGCAATCTACCCATACGCTCGCTCGCGCCGCAATTCT GGTAGTGCGACGCTACACGAGTCTTGAGGAGCTCGCTTTTTTTCCGATGT TCCTCCCGGAGCCGATTCTGCCCCCTCTGGACTTTCCTCGGCTACTGGCC CCGAACGACGTCAACGTTAACGACCAGATTCTGCAGCGGTGAGCAGGTGG TGAAGCAAGCGTGGGTATGTGCGTGTGTGTACACCGATGTTAATATTTAC GCATCCAGGAATGCTACTCTAGACCAAGACGGGCGGCTACCTATCCGAAG AGACGGAAGGTGCATCGGGAGCAAGTTGTACACTCAATTCAAGTTACTTA TTTTGCTGTAATGCTGTCGAGTTCTGTTCAACAGCAGCGGTTGAATCGCC AGTTTTATGTGTGACTGCGTCCAAATCCGAACATACTCTCGACATGTGGG CTGTAGTATACATGGTGCGAAGTAAAACTTGGACGGACACGGTTGAGGGT TCATGCCATGCGCCTTCCCGACCGAACAGATGGTAACATCACGTACAAGC ACGTATGATAGGAGGTGGGGGAGGCGTAAGGTCATCGATCCCCTCCCTTC CCGGCCGCCGTCTTCCCGCCTGCTCCCGATGGGCACTTCCGCCGCTGCTG TTGTAGATGTTTATCCTCACCATCGCAGCAGCACCGTGCCGGCGGTGTAC GTGGTCTGACAAGCGAGACGCCCCCCTAATTCAACTGCGTTCTCTGCGAC ACGATCACACGTACGTGTGTAATGGCGTGTGACATGCCACCATACATGCG CGCAGTTACGTGTCGGAGATCGTGCCGATGATCTGCGAGCCTGGAGACGA CGAGCAGCACGGGTCTTCGGTCGTGTGCGACGTCAACGCTCTGCAGGCGC TCAGTCGGAGGGTGCACCTCGGAAAGTTCGTTGCGGAGAGCAAATTTCAG GTATTGACATGTTACACTCGCTATATCTTCTATCAAGCGGGGGGGGGGGT TGGGGGGGGTAGGTGGGCCTTCTGTTCGAGGCGTGCTGGTGCTTATTGTT GTTTTCTGTCATGGGATGACCGGGTGGCGAGTGGCGTTGTTTTTCACGTC TTCCGTGTCACAGCAGTAGTGTTGTGAGCCGTACCCCCCCCCCCCGGCGG CAGGCTTCATTATCATTTTGCATAGCCGTTATTCCATCGATATCCTGCTT TTTTGCATCGCCGTTGAGTACGGAGATACCTCCGCGCTTTCTTCTATCCA GGTGTGATGTCTCGCGTTGACCGCCATCCAGCTTCCCGTGGCAGTGCTTT TTCGCAGCGGTATACCCTCTGTTTTGGTGCCCGAGGAAACGGCTCTCCGA GCTACACCTAGCCCGTGATACGGCTTTGAAACCCTCGCACGCTCTCCTTG CTGCAGTAACATTCCACAGTGCTAGTGCGCCAGCTCCCATCTTGTAATTT TCCTTGACTGAAGCAAATAACACCAAACATAACTCCCTTGTGTGTGTTGT GCGTACAGGAGGACAGTAAAATGTACCAGGAACTGTGCCGAGCGGGAGAC GTGCTCGGCGTGCTCGAGCTCCTGACAAACAAGGCCGTGGAGGAGAGGGT CCTCCAGCGGGCCTTCATGAAAGCGTCCACGTACGGCAGTGACATCGACT TGCCCGTTTCGTCGCCGGGCGATGGTGAAAAGAGTGGAGGAGGCGGGGAA GGCGGTGTTGGTGCCGCCAAGGGAGAGCGGAACTTCAAGGTTGAGCCGCA GACCATTGTGAACATATACCGGGACACAGTGATCCCGCTCACCAAGGACG TGGAGATTCTGTACCTCTTTCAGCGAACAGGCTACCCCTGTCCATCGCTT GCTGGAATACATGACGTTTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig211:38492..44512-

>mRNA_P-littoralis_Contig211.17.1 ID=mRNA_P-littoralis_Contig211.17.1|Name=mRNA_P-littoralis_Contig211.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1245bp|location=Sequence derived from alignment at P-littoralis_Contig211:38492..44512- (Pylaiella littoralis U1_48)
ATGTCGTTTTGCACGCTTCCGTCGGCAGCGGGCCGGCGAATCGTCCTCCC
CAAAACGACAACACCAGGAGGTATACCTGTGTCGTCGTCGTCGTCGTCGT
CGAGCATCAGCAGCAGGAGTTCGGGATCACGAGGAGGAGCAGGAGAGATG
AAGATCGCAGCTGGGCAGCAGGACATCCTTGGTGTGCACGGTGCTGACGT
TGCGCAACCTGGTTCGAACGATACTGTCAAGGCAGAGCCTTCATCATTGC
CACTTCCGCCGAGAGAGGAACCGCCAGACGCAGCAGCTGGGGTCGACAGC
AACGTCATCAGCAGTGCAGATATCATCAGGGGCAAGCGAGCCAACTCCGC
GGCCACCAAGGATGTCATCAACCGGAAGCCTCCATTGGTGGCGCGGAGTC
TGGACAGCGTGCGGGGGTCGCTGATCCGGCAGGAGGAGACAATCATTTTT
GCGCTGATCGAGAGGGAGCAGTTCCGCAGCAACGCGGCCATATACACTGA
GAGAACCTTCCGGGTGAACCGCAGCGACGCGGCCGACATTTACGGCCGAG
ATGCGAGCTTCTTGGAGTACATGCTGTGCGAGACGGAGAAGCTGCACGCG
ACAGTGCGACGCTACACGAGTCTTGAGGAGCTCGCTTTTTTTCCGATGTT
CCTCCCGGAGCCGATTCTGCCCCCTCTGGACTTTCCTCGGCTACTGGCCC
CGAACGACGTCAACGTTAACGACCAGATTCTGCAGCGTTACGTGTCGGAG
ATCGTGCCGATGATCTGCGAGCCTGGAGACGACGAGCAGCACGGGTCTTC
GGTCGTGTGCGACGTCAACGCTCTGCAGGCGCTCAGTCGGAGGGTGCACC
TCGGAAAGTTCGTTGCGGAGAGCAAATTTCAGGAGGACAGTAAAATGTAC
CAGGAACTGTGCCGAGCGGGAGACGTGCTCGGCGTGCTCGAGCTCCTGAC
AAACAAGGCCGTGGAGGAGAGGGTCCTCCAGCGGGCCTTCATGAAAGCGT
CCACGTACGGCAGTGACATCGACTTGCCCGTTTCGTCGCCGGGCGATGGT
GAAAAGAGTGGAGGAGGCGGGGAAGGCGGTGTTGGTGCCGCCAAGGGAGA
GCGGAACTTCAAGGTTGAGCCGCAGACCATTGTGAACATATACCGGGACA
CAGTGATCCCGCTCACCAAGGACGTGGAGATTCTGTACCTCTTTCAGCGA
ACAGGCTACCCCTGTCCATCGCTTGCTGGAATACATGACGTTTGA
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