mRNA_P-littoralis_Contig211.12.6 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig211.12.6 vs. uniprot
Match: A0A6H5JK11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK11_9PHAE) HSP 1 Score: 316 bits (810), Expect = 1.990e-101 Identity = 155/176 (88.07%), Postives = 165/176 (93.75%), Query Frame = 2
Query: 419 DEAPHTLFGNRAAARLSLGRPQEALEDAETAIQKDGKWLKGYHRKACAHQAMGERGVALETYRHALEIEPKNRWLQEQVRLAKAEVVSISKVEPIESFDAWITVFESMSDSRERLSTLAHLWNQCQTKDRRVHEIFGQFLSLIAGAGTQHTGVKPEHFTEEMMVSLPMDNYDDLKA 946
+EAPHTLFGNRAAARL LG PQ+ALEDAETAI+KDG WLKGYHRKACAHQAMGERGVALETYRHAL+IEPKN+WLQEQVR A+AEVVS SKVEP+ES DAWI VFESMSDSRERLSTLAHLWNQC+T DR HEIFGQFLSLIAGAGTQHTGVKPE FTE+MMVSLPMDNY+DLKA
Sbjct: 38 EEAPHTLFGNRAAARLGLGLPQQALEDAETAIKKDGTWLKGYHRKACAHQAMGERGVALETYRHALDIEPKNKWLQEQVRRARAEVVSASKVEPVESVDAWIVVFESMSDSRERLSTLAHLWNQCETPDR--HEIFGQFLSLIAGAGTQHTGVKPEDFTEDMMVSLPMDNYEDLKA 211
BLAST of mRNA_P-littoralis_Contig211.12.6 vs. uniprot
Match: A0A6V1NCR2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NCR2_HETAK) HSP 1 Score: 142 bits (359), Expect = 1.700e-35 Identity = 73/168 (43.45%), Postives = 105/168 (62.50%), Query Frame = 2
Query: 440 FGNRAAARLSLGRPQEALEDAETAIQKDGKWLKGYHRKACAHQAMGERGVALETYRHALEIEPKNRWLQEQVRLAKAEVVSISKVEPIESFDAWITVFESMSDSRERLSTLAHLWNQCQTKDRRVHEIFGQFLSLIAGAGTQHTGVKPEHFTEEMMVSLPMDNYDDLK 943
FGNR+AARLSLG+ +EAL DA A++ D ++KGYHR+ACA +AMG E YR A + + N W + Q + AK E + + EP+ + + W+ +F + D RER+ LA WN +R+ IF +FL++I+GA K E FTE+ MV LPMDNY+D++
Sbjct: 46 FGNRSAARLSLGKNEEALADALEALRIDSSYMKGYHRQACALKAMGNLEGVYEAYRAAFQTDSSNDWAKTQYKQAKKEYTTFLREEPVSTIEQWVKLFGMLEDPRERMMQLALFWNASSPAERQ--SIFHRFLAIISGAAMTDAVAK-EEFTEDKMVELPMDNYEDMQ 210
BLAST of mRNA_P-littoralis_Contig211.12.6 vs. uniprot
Match: A0A835Z8N5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N5_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.310e-27 Identity = 73/195 (37.44%), Postives = 103/195 (52.82%), Query Frame = 2
Query: 431 HTLFGNRAAARLSLGRPQEALEDAETAIQKDGKWLKGYHRKACAHQAMGERGVALETYRHALEIEPKNRWLQEQVRLAKAEVVSISKVEPIESFDAWITVFESMSDSRERLSTLAHLWNQCQTKDRRVHEIFGQFLS--------------------LIAGAGTQ-HTGVKPEHFTEEMMVSLPMDNYDDLKASP 952
HTL+GNRA R+ L + +AL DA+ A+ W KG++RKACAHQA+G+ A + AL +EP N ++++ A+AE+ E + F ++ D+R RL LAHLWN C +R H IF +FL +++ AG Q HTGV E F E + +LPMDNY DL +P
Sbjct: 56 HTLYGNRALVRMHLEKHSDALADADAAVALAPTWAKGFYRKACAHQALGQAAEAHAAFLTALALEPDNALVKKKTVEAQAELARRCGEEAARDEAEFRAAFAALPDARRRLHCLAHLWNLCAPDER--HAIFARFLQAATPLAADDADARRAPRDAQVVSSAGDQPHTGVHAEDFPPESLSALPMDNYTDLPPAP 248
BLAST of mRNA_P-littoralis_Contig211.12.6 vs. uniprot
Match: A0A7S3QRU5_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QRU5_DUNTE) HSP 1 Score: 64.3 bits (155), Expect = 1.430e-7 Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 2
Query: 428 PHT--LFGNRAAARLSLGRPQEALEDAETAIQKDGKWLKGYHRKACAHQAMGERGVALETYRHALEIEPKNRWLQEQVRLAKAEVVSISK 691
PH LF NR+AA L L ++A++DA+ AI+ + W KGY+RK CA +A G+ AL YR ALE +N L VR K + + K
Sbjct: 61 PHNAVLFSNRSAAALQLAELEDAVKDADKAIELNPSWDKGYYRKGCALEAAGKDMEALAAYRSALERNNENGELHRLVRKMKQKTGTTGK 150
BLAST of mRNA_P-littoralis_Contig211.12.6 vs. uniprot
Match: A0A061RRA0_9CHLO (DnaJ homolog subfamily C member 5 n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RRA0_9CHLO) HSP 1 Score: 65.5 bits (158), Expect = 1.750e-7 Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 2
Query: 437 LFGNRAAARLSLGRPQEALEDAETAIQKDGKWLKGYHRKACAHQAMGERGVALETYRHALEIEPKNRWLQEQVRLAKAEV 676
L NR+AAR + G+ QEALEDAE A+Q + +W KGY RK A +G+ G L+ Y+ AL I+P ++ + AKA +
Sbjct: 1012 LLSNRSAARAAGGKWQEALEDAERAVQLEPRWPKGYCRKGAALVGLGQAGEGLKAYKAALAIDPDYAAAKQGISDAKAAI 1091
BLAST of mRNA_P-littoralis_Contig211.12.6 vs. uniprot
Match: A0A2R7WDD4_ONCFA (Stress-induced-phosphoprotein 1 n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7WDD4_ONCFA) HSP 1 Score: 64.7 bits (156), Expect = 2.180e-7 Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 2
Query: 419 DEAPHTLFGNRAAARLSLGRPQEALEDAETAIQKDGKWLKGYHRKACAHQAMGERGVALETYRHALEIEPKNRWLQEQVRLAKA 670
D H L+ NR+AA G Q+ALEDAET ++ +W KGY RK A +G + A++ Y L+ +P N L+E + KA
Sbjct: 41 DGKNHVLYSNRSAAYAKSGSYQKALEDAETTVELQPQWAKGYSRKGSALAFLGRKKEAIDAYNEGLKYDPNNAQLKEGLESIKA 124
BLAST of mRNA_P-littoralis_Contig211.12.6 vs. uniprot
Match: A0A5B8MAS3_9CHLO (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MAS3_9CHLO) HSP 1 Score: 64.7 bits (156), Expect = 2.920e-7 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 2
Query: 434 TLFGNRAAARLSLGRPQEALEDAETAI--QKD-GK-WLKGYHRKACAHQAMGERGVALETYRHALEIEPKN 634
TLFGNR+AA L+LGRP +A+ DA +I KD G+ W KGY+R CA +A+ G A E Y+ L +EP+N
Sbjct: 74 TLFGNRSAAYLALGRPSDAVLDASKSIVLSKDQGRPWAKGYYRLGCALEALERYGQAAEAYKEGLALEPEN 144
BLAST of mRNA_P-littoralis_Contig211.12.6 vs. uniprot
Match: A0A6A1W2X6_9ROSI (Stress-induced-phosphoprotein 1 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1W2X6_9ROSI) HSP 1 Score: 62.4 bits (150), Expect = 6.410e-7 Identity = 36/116 (31.03%), Postives = 63/116 (54.31%), Query Frame = 2
Query: 419 DEAPHTLFGNRAAARLSLGRPQEALEDAETAIQKDGKWLKGYHRKACAHQAMGERGVALETYRHALEIEPKNRWLQEQVRLAKAEVVSISKVEPIESFDAWITVFESMSDSRERLS 766
D + TL+ NRAAA L L + +AL DAET I +W KGY RK C +AMG+ AL ++ AL+ P++ + ++++ +V+ +E+ + I + + + + +S
Sbjct: 57 DPSNPTLYSNRAAAFLQLVKLSKALADAETTIALKPQWEKGYFRKGCILEAMGQYDDALAAFQTALQYNPQSSEVSRKIKMISQLARDKKRVQEVENKRSNIDMAKQLDALKSEMS 172
BLAST of mRNA_P-littoralis_Contig211.12.6 vs. uniprot
Match: A0A2R5GMZ8_9STRA (Small glutamine-rich tetratricopeptide repeat-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMZ8_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 7.000e-7 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 2
Query: 437 LFGNRAAARLSLGRPQEALEDAETAIQKDGKWLKGYHRKACAHQAMGERGVALETYRHALEIEPKNRWLQEQVR 658
LFGNRA ARL +GR ++ALEDAE AI+ D W K + R A + + A + + LE+EP N+ Q++++
Sbjct: 73 LFGNRAMARLMMGRFKDALEDAEAAIELDASWTKAWFRAGKAEVGLEKLDEAQKRFEKILELEPDNKAAQQEIK 146
BLAST of mRNA_P-littoralis_Contig211.12.6 vs. uniprot
Match: A0A6T2K395_9EUGL (Peptidylprolyl isomerase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T2K395_9EUGL) HSP 1 Score: 58.5 bits (140), Expect = 4.600e-6 Identity = 34/98 (34.69%), Postives = 55/98 (56.12%), Query Frame = 2
Query: 437 LFGNRAAARLSLGRPQEALEDAETAIQKDGKWLKGYHRKACAHQAMGERGVALETYRHALEIEPKNRWLQEQVRLAKAEVVSISKVEPIESFDAWITV 730
L+ NR+A+ L L R +EAL DAE A++ D KW KG++RKA QAM + A + AL+ + N + +R K + + + + FD ++T+
Sbjct: 40 LYSNRSASYLKLDRKEEALADAEKAVEADPKWPKGFYRKALTLQAMEKYKQAAQVCEQALKFDKNN----DTIRRLKLDCL-----DNVTEFDEYVTI 128 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig211.12.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig211.12.6 >prot_P-littoralis_Contig211.12.6 ID=prot_P-littoralis_Contig211.12.6|Name=mRNA_P-littoralis_Contig211.12.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=271bp MQVWGYFFSCDRSAIPANNRLPRGSKSPLVLFISCFVSSYFAFFSGMFPLback to top mRNA from alignment at P-littoralis_Contig211:32389..35621+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig211.12.6 ID=mRNA_P-littoralis_Contig211.12.6|Name=mRNA_P-littoralis_Contig211.12.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=3233bp|location=Sequence derived from alignment at P-littoralis_Contig211:32389..35621+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig211:32389..35621+ >mRNA_P-littoralis_Contig211.12.6 ID=mRNA_P-littoralis_Contig211.12.6|Name=mRNA_P-littoralis_Contig211.12.6|organism=Pylaiella littoralis U1_48|type=CDS|length=813bp|location=Sequence derived from alignment at P-littoralis_Contig211:32389..35621+ (Pylaiella littoralis U1_48)back to top |