|
|
Homology
BLAST of mRNA_P-littoralis_Contig211.9.1 vs. uniprot
Match: D7FQ23_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ23_ECTSI) HSP 1 Score: 248 bits (634), Expect = 1.510e-79 Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 3
Query: 438 NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAITTCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKGIFKIVNWADVQERLTAATS 803
NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAI TCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVK IFK+VNWADVQERLTAATS
Sbjct: 109 NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAATS 230
BLAST of mRNA_P-littoralis_Contig211.9.1 vs. uniprot
Match: A0A7S2D386_9STRA (Superoxide dismutase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D386_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.070e-50 Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = 3
Query: 438 NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAITTCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKGIFKIVNWADVQERLTAA 797
NLAP KGGG + G LA +I+A++ S + EKM+AA+V VQGSGWGWLGYDK + +A+ CANQDPLEATTGLVPL GIDVWEHAYYLQYKNVRPDYVK I+++ NW+DV RL AA
Sbjct: 110 NLAPPSKGGGGVPEGELAALIDAKFGSFDAMKEKMTAATVAVQGSGWGWLGYDKTSGSVAVACCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVKAIWELANWSDVAARLEAA 229
BLAST of mRNA_P-littoralis_Contig211.9.1 vs. uniprot
Match: A0A835YN63_9STRA (Superoxide dismutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN63_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.070e-50 Identity = 84/128 (65.62%), Postives = 99/128 (77.34%), Query Frame = 3
Query: 423 IKHLL---NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAITTCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKGIFKIVNWADVQERLTAA 797
I H + NLAP GGG++ G+L D I++Q+ S+ L EK+SAA+VGVQGSGWGWL YDKV +LAI T ANQDPLE TTG+VPLLGIDVWEHAYYLQYKNVRP YVK IF ++NW DV+ R AA
Sbjct: 101 INHSIFWKNLAPTSAGGGKLECGSLKDAIDSQFGSLDGLKEKLSAAAVGVQGSGWGWLAYDKVACKLAIATTANQDPLEPTTGMVPLLGIDVWEHAYYLQYKNVRPSYVKEIFNVINWKDVECRYEAA 228
BLAST of mRNA_P-littoralis_Contig211.9.1 vs. uniprot
Match: A0A812QTX9_SYMMI (Superoxide dismutase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QTX9_SYMMI) HSP 1 Score: 173 bits (439), Expect = 1.530e-50 Identity = 85/138 (61.59%), Postives = 99/138 (71.74%), Query Frame = 3
Query: 438 NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAITTCANQDPLEATTGLVPLLGIDVWEHAYYLQ------------------YKNVRPDYVKGIFKIVNWADVQERLTAA 797
NLAPVG+GGGEMV+G L +MI +Q+ S+ L + MSA+++ +QGSGWGWLGYDK +L + TCANQDPLEATTGLVPL GIDVWEHAYYLQ YKNVRPDYV GI+KIVNW DV RL A
Sbjct: 58 NLAPVGQGGGEMVSGDLENMINSQFGSLDGLKKTMSASTIAIQGSGWGWLGYDKTAGQLKVATCANQDPLEATTGLVPLFGIDVWEHAYYLQVRCRVCVRMSRRLTTSLQYKNVRPDYVNGIWKIVNWRDVAARLQKA 195
BLAST of mRNA_P-littoralis_Contig211.9.1 vs. uniprot
Match: A0A7S2SP93_9STRA (Superoxide dismutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP93_9STRA) HSP 1 Score: 173 bits (438), Expect = 5.540e-50 Identity = 80/120 (66.67%), Postives = 95/120 (79.17%), Query Frame = 3
Query: 438 NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAITTCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKGIFKIVNWADVQERLTAA 797
NLAP KGGG TG LA +I+ ++ S + +KM+AA+V VQGSGWGWLGYDK + +A+T C NQDPLEATTGLVPL GIDVWEHAYYLQYKNVRPDYVK I+++ NW+DV RL AA
Sbjct: 106 NLAPPSKGGGGEPTGELAALIDKKFGSFDAMKDKMTAATVAVQGSGWGWLGYDKASDSVAVTCCFNQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVKAIWQLANWSDVAARLEAA 225
BLAST of mRNA_P-littoralis_Contig211.9.1 vs. uniprot
Match: A7RHP7_NEMVE (Superoxide dismutase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RHP7_NEMVE) HSP 1 Score: 171 bits (433), Expect = 2.610e-49 Identity = 82/122 (67.21%), Postives = 96/122 (78.69%), Query Frame = 3
Query: 438 NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAITTCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKGIFKIVNWADVQERLTAATS 803
NL+P GGGE TG L + I+ + S E+ +AA++ VQGSGWGWLGYDKVNKRLAI TC NQDPL+ TTGLVPLLGIDVWEHAYYLQYKNVRPDYVK I+ ++NW +V ERL AA+S
Sbjct: 103 NLSP--NGGGEP-TGELMEAIKRDFGSFENFKERFNAATIAVQGSGWGWLGYDKVNKRLAIATCFNQDPLQPTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKAIYDVINWTNVAERLQAASS 221
BLAST of mRNA_P-littoralis_Contig211.9.1 vs. uniprot
Match: A0A0L0GCR8_9EUKA (Superoxide dismutase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GCR8_9EUKA) HSP 1 Score: 169 bits (427), Expect = 4.810e-49 Identity = 79/120 (65.83%), Postives = 93/120 (77.50%), Query Frame = 3
Query: 438 NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAITTCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKGIFKIVNWADVQERLTAA 797
NLAP +GGG+ +G L D + A++ S+ + M+A + VQGSGWGWLGYDKVNK L I TCANQDPLEATTGL+PLLGIDVWEHAYYLQYKNVRPDY+ I+KIVNW +V ER A
Sbjct: 53 NLAPTNQGGGDFPSGKLYDDLIAKWGSVEAFQKDMAAKTAAVQGSGWGWLGYDKVNKSLKIQTCANQDPLEATTGLIPLLGIDVWEHAYYLQYKNVRPDYLNEIWKIVNWQNVAERYNKA 172
BLAST of mRNA_P-littoralis_Contig211.9.1 vs. uniprot
Match: A0A226DD29_FOLCA (Superoxide dismutase n=2 Tax=Folsomia candida TaxID=158441 RepID=A0A226DD29_FOLCA) HSP 1 Score: 170 bits (431), Expect = 1.980e-48 Identity = 84/125 (67.20%), Postives = 95/125 (76.00%), Query Frame = 3
Query: 423 IKHLL---NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAITTCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKGIFKIVNWADVQERL 788
I H + NL+P KGGGE +G LAD+I+ + S E++S A+VGVQGSGWGWLGY+KV KRL I TC NQDPLEATTGLVPL GIDVWEHAYYLQYKNVRPDYVK IF + NW DV RL
Sbjct: 141 INHSIFWANLSP--KGGGEP-SGELADLIKRDFGSFATFKERLSGATVGVQGSGWGWLGYNKVAKRLEIATCPNQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVKNIFNVANWTDVATRL 262
BLAST of mRNA_P-littoralis_Contig211.9.1 vs. uniprot
Match: A0A7R9BCY4_9CRUS (Superoxide dismutase n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BCY4_9CRUS) HSP 1 Score: 168 bits (426), Expect = 3.220e-48 Identity = 84/128 (65.62%), Postives = 95/128 (74.22%), Query Frame = 3
Query: 423 IKHLL---NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAITTCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKGIFKIVNWADVQERLTAA 797
I H + NL+P KGGGE TG LAD I+ + S + ++SAA+VGVQGSGWGWLGYDK KRL I CANQDPLE TTGLVPL GIDVWEHAYYLQYKNVRPDYV I+K+ NW DV +RL A
Sbjct: 99 INHSIFWQNLSP--KGGGEP-TGALADQIKKDFGSFDNMKAQLSAATVGVQGSGWGWLGYDKQAKRLRIAVCANQDPLEPTTGLVPLFGIDVWEHAYYLQYKNVRPDYVNNIYKVANWEDVAKRLKDA 223
BLAST of mRNA_P-littoralis_Contig211.9.1 vs. uniprot
Match: A0A1L3THW9_9MAXI (Superoxide dismutase n=1 Tax=Tigriopus kingsejongensis TaxID=1133412 RepID=A0A1L3THW9_9MAXI) HSP 1 Score: 167 bits (424), Expect = 6.050e-48 Identity = 83/128 (64.84%), Postives = 94/128 (73.44%), Query Frame = 3
Query: 423 IKHLL---NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAITTCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKGIFKIVNWADVQERLTAA 797
I H + NL P G G E G LA IE + S+ + E++SAASVGVQGSGWGWLGY K + RL I +CANQDPLEATTGLVPL GIDVWEHAYYLQYKNVRPDYVK IF++ NW DV +RL A
Sbjct: 96 INHSIFWQNLTPGGSGEPE---GALAQAIERDFGSLKTMQERLSAASVGVQGSGWGWLGYHKPSGRLQIASCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVKAIFEVANWKDVADRLAQA 220
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FQ23 |
| Preferred name | SOD2 |
| PFAMs | Sod_Fe_C,Sod_Fe_N |
| Model size | 806 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K04564 |
| KEGG Pathway | ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000302,GO:0000303,GO:0000305,GO:0001101,GO:0001306,GO:0001315,GO:0001505,GO:0001666,GO:0001836,GO:0001889,GO:0001976,GO:0002237,GO:0002376,GO:0002520,GO:0002682,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003018,GO:0003032,GO:0003044,GO:0003068,GO:0003069,GO:0003070,GO:0003073,GO:0003085,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004784,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0006355,GO:0006357,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006801,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006970,GO:0006974,GO:0006979,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007399,GO:0007507,GO:0007568,GO:0007571,GO:0007584,GO:0007610,GO:0007626,GO:0008015,GO:0008144,GO:0008150,GO:0008152,GO:0008217,GO:0008219,GO:0008285,GO:0008340,GO:0008630,GO:0008631,GO:0008637,GO:0009058,GO:0009266,GO:0009295,GO:0009314,GO:0009409,GO:0009410,GO:0009593,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009628,GO:0009635,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009790,GO:0009791,GO:0009793,GO:0009838,GO:0009887,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009908,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010042,GO:0010043,GO:0010154,GO:0010212,GO:0010227,GO:0010259,GO:0010269,GO:0010332,GO:0010468,GO:0010506,GO:0010556,GO:0010646,GO:0010648,GO:0010660,GO:0010661,GO:0010821,GO:0010941,GO:0010942,GO:0012501,GO:0014823,GO:0015980,GO:0016020,GO:0016043,GO:0016209,GO:0016491,GO:0016721,GO:0016999,GO:0017000,GO:0017144,GO:0019219,GO:0019221,GO:0019222,GO:0019430,GO:0019825,GO:0019866,GO:0019899,GO:0022008,GO:0022414,GO:0022607,GO:0022900,GO:0022904,GO:0023051,GO:0023052,GO:0023057,GO:0030097,GO:0030145,GO:0030154,GO:0030182,GO:0030334,GO:0030335,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031667,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032364,GO:0032496,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0033043,GO:0033273,GO:0033483,GO:0033554,GO:0033591,GO:0033993,GO:0034021,GO:0034097,GO:0034284,GO:0034391,GO:0034393,GO:0034599,GO:0034614,GO:0034641,GO:0035150,GO:0035206,GO:0035296,GO:0035556,GO:0035690,GO:0035722,GO:0035900,GO:0035902,GO:0036094,GO:0036293,GO:0036296,GO:0036473,GO:0038001,GO:0040012,GO:0040017,GO:0042127,GO:0042221,GO:0042311,GO:0042391,GO:0042493,GO:0042542,GO:0042554,GO:0042592,GO:0042645,GO:0042742,GO:0042743,GO:0042802,GO:0042803,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043167,GO:0043169,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043473,GO:0043523,GO:0043524,GO:0043603,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045333,GO:0045428,GO:0045429,GO:0045471,GO:0045595,GO:0045596,GO:0045597,GO:0045598,GO:0045599,GO:0045776,GO:0046677,GO:0046686,GO:0046872,GO:0046914,GO:0046983,GO:0048066,GO:0048145,GO:0048147,GO:0048316,GO:0048367,GO:0048437,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048608,GO:0048660,GO:0048662,GO:0048666,GO:0048678,GO:0048699,GO:0048731,GO:0048732,GO:0048773,GO:0048856,GO:0048869,GO:0048878,GO:0050665,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050877,GO:0050880,GO:0050896,GO:0050931,GO:0051093,GO:0051094,GO:0051128,GO:0051147,GO:0051149,GO:0051150,GO:0051152,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051252,GO:0051259,GO:0051260,GO:0051262,GO:0051270,GO:0051272,GO:0051289,GO:0051602,GO:0051606,GO:0051704,GO:0051707,GO:0051716,GO:0051881,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055093,GO:0055114,GO:0060255,GO:0060548,GO:0061008,GO:0061458,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070482,GO:0070671,GO:0070887,GO:0071000,GO:0071236,GO:0071310,GO:0071345,GO:0071349,GO:0071361,GO:0071450,GO:0071451,GO:0071704,GO:0071840,GO:0072359,GO:0072593,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090567,GO:0097159,GO:0097190,GO:0097193,GO:0097237,GO:0097249,GO:0097305,GO:0097306,GO:0097746,GO:0097755,GO:0098542,GO:0098754,GO:0098771,GO:0098796,GO:0098798,GO:0098800,GO:0098869,GO:0099402,GO:1900239,GO:1900241,GO:1900407,GO:1900408,GO:1901214,GO:1901215,GO:1901342,GO:1901363,GO:1901564,GO:1901700,GO:1901701,GO:1902175,GO:1902176,GO:1902531,GO:1902532,GO:1902882,GO:1902883,GO:1903146,GO:1903201,GO:1903202,GO:1903409,GO:1903426,GO:1903428,GO:1903506,GO:1904018,GO:1904407,GO:1904705,GO:1904706,GO:1905063,GO:1905065,GO:1905459,GO:1905461,GO:1905915,GO:1905917,GO:1905930,GO:1905932,GO:1990748,GO:2000026,GO:2000112,GO:2000145,GO:2000147,GO:2000377,GO:2000379,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243 |
| Exons | 4 |
| Evalue | 3.5e-82 |
| EggNOG OGs | COG0605@1|root,KOG0876@2759|Eukaryota |
| EC | 1.15.1.1 |
| Description | oxidoreductase activity, acting on superoxide radicals as acceptor |
| Cds size | 468 |
| COG category | P |
| BRITE | ko00000,ko00001,ko01000 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790031.2835488-CDS-P-littoralis_Contig211:25540..25708 | 1680790031.2835488-CDS-P-littoralis_Contig211:25540..25708 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig211 25541..25708 - |
| 1680790031.2966485-CDS-P-littoralis_Contig211:26008..26209 | 1680790031.2966485-CDS-P-littoralis_Contig211:26008..26209 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig211 26009..26209 - |
| 1680790031.3053365-CDS-P-littoralis_Contig211:27540..27639 | 1680790031.3053365-CDS-P-littoralis_Contig211:27540..27639 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig211 27541..27639 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790031.31842-UTR-P-littoralis_Contig211:27639..27794 | 1680790031.31842-UTR-P-littoralis_Contig211:27639..27794 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig211 27640..27794 - |
| 1680790031.3288155-UTR-P-littoralis_Contig211:29177..29360 | 1680790031.3288155-UTR-P-littoralis_Contig211:29177..29360 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig211 29178..29360 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig211.9.1 >prot_P-littoralis_Contig211.9.1 ID=prot_P-littoralis_Contig211.9.1|Name=mRNA_P-littoralis_Contig211.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=156bp
MRDREIHAEKQAETDRGRGREREIDTQSIKHLLNLAPVGKGGGEMVTGTL
ADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAITTCANQ
DPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKGIFKIVNWADVQERL
TAATS* back to topmRNA from alignment at P-littoralis_Contig211:25541..29360- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig211.9.1 ID=mRNA_P-littoralis_Contig211.9.1|Name=mRNA_P-littoralis_Contig211.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3820bp|location=Sequence derived from alignment at P-littoralis_Contig211:25541..29360- (Pylaiella littoralis U1_48)
ATGGCGAGCAGAATCGCATGTAACGCTGCGCGTCGCGCCCCTTCGTCAGG
GCGGACGATCTCCTCGTCGGCCGCTGCAAGGGGGGCCACCGCGGTCTTGC
CCGACCTCACGTACGACTACGGCGAGCTTGAACCTGCAATCAGCGGCGAG
ATCATGAAAATTCACCATACCAAGCACCACCAGGTACAGCACGCCGAGGT
CTGCTGTGTGCACTTGCAGTTCGAACTTCTGGTGCTGCTGCACAAAACGA
CGGGTAGTGTTTTGCCGCTCTGCGAGCAATGTCACACGTGGCAGGCGTCC
TGCAGTTGCAAATGTGTCCGAGCAGCATTACTATGTTACAAGTAGATGTT
GAGCAGCAAAATCTGTCGTTAGCGGCGGGACCGGCTCTAAAGACATTTAC
ACAGAGTGCGTGTGTTGTCATCCCTTTGATTGGACGCCACTCTACACCTT
TCGGGTAGGTAGACGCTCCAACCGGGGTCACACAGGGGGAAGTCAACACA
GGAGTTTTTTTTTTTTCTCCATTTCCCTCTGCGGTGCTTGCCTTTTTGGT
TGAGCTTTTATCGCGAGAAAGGGGACAGCAATCCCTTTCCCTCGTCGATG
GTACGATCGAATTTTGTTTACTCACGAATTGATCGCTTTCCACTTTCAGA
GTGGGCGCAAAAATTGAGAATTTCATCCGCAGCAAACAATCTGTGGTGAT
GTCATCATGTACAAGGATGACAGGCGCATGAAGCAGCTCCCATGAAGAGC
TATGCGATACCCCGCCGAACTAAACGTAGCACTTCGATAGTCCGCAATGA
ATAACACACCCCGCCCGCTCACCAGCGTGAGTGTGTGAGCAGTTCGTCGC
AAGACCGATCACCACTACCTGTACAGCAGTACAGCAGTCCCATACGAAAT
ACACTTTTTTTTTTACATTTCAACGCGAGGATTCGAGAAATCGCCTCGTG
CAGAGCGCCGAGACACACCTACTGCCTGCCTGTACGTACTGAGTAGGGAT
CACTACCCGAAAGCTTGCTGTCCGTTGGGTAGATGAAAAGCGCCACGAAC
AATACAGTCGCTTGTACCGGTATATTCCGCATTGCATTTTGCCCTCTGAT
GCGCGTTGCGGTTTAGGGTATTCACCTGGTCGGGTTTCTTGGGGTTTGCC
CTCGGTCACCAGCGATTTTCATGAAAAAAAAACACCAAAAAGCGTACTAC
TACTGCTGCGTGCTCTCTACATACATCTTTAGCTATCTTGTTTCAGTAGC
AAAGCGCGGTGACGGCCCCTCCGGGACACACATGATATGATATCATAGCA
GCAGATTATGGTATATAGCATCCACGTGTCAGTACAAACATGGGGTAGAA
CGGCTAGCTCACTGATGCGTGAAATTGTTATCTTTCTTGTGTCCTGTCGA
ACCCTCTCATATGTTGAAAAATGCTGAAATGTAACGGGATATATTTTGAA
GAACCACGCACACAGCTCTGTCTACTGCCATCTTCTAACGACTGAATGTC
AGACTGAAATGTTGAACTGCGAAGTAAATACTAGAAGTGCGTTTTCTACT
CCAATGCCACACTAAGGCGTACATAAACAACCTGAACGCGGCGATGGAGA
AGCTTGCGGACGCCGAGGAAAGGGGCGACGTGACTGCGATTGTGAAGCTC
CAGGCTGCCATCAAGTTCAACGGCGGCGGGCACCTCAACCACTCCATTTT
CTGGAAGGCAAGAGAGAAGAGATGAGGGACAGAGAGATACACGCAGAGAA
ACAGGCAGAGACAGACAGAGGAAGAGGGAGAGAGAGAGAAATAGACACGC
AAAGCATAAAGCATTTGCTGGTACTCCTATTCATCTTGGGAGTTTTTGAA
AGGAACCGGCTTAACTATCGTACACACCGTCTTTTGGAACGGAACCGCGC
GTTCCTGCGTGATGGGGGAAGGGGGTGATTATTACCGTTTCCCGCCTCCG
TATGTGGAGAGCAGATGTTCACGAAGGCGCCCCAAATGTAAGAAGTTTAG
TTCTTGCCCTTTCCCCCAAATCATGCTCTCCCTTTTCGTCGTCGTGCAGC
GTTTGTTTTATACGAAGTACTTCGTACCGGTACTCGAAGTACTTCGGAGT
ACAATTTTTCGTGTCATTCCTCTTGTTTTGGGGGAAAAAAAATCATCATT
GACGTGGTCGAGTCGCATCACAGCCGCTCGTTCGTATTATATGGATCTGC
ATACAGGCAAGGGCCTTCTTTTCCCGAGTGATGTTGTGATGACATTCCTC
AGACAGAGACTGTTTCTTACGGCTTTCTCTTTTTGAGGATTTTTTTACGC
TTCGCAACACTTCCGCCGAAATCCAAAGAGCCGAAACGACTGAAAAGGCT
ACTTTTTGAGCACAATAGGAGACAGCACCAACCAGAACTCTACCCCTGGC
GCACCAATCGCGATCAAACCTGCCGGAGCGTGCGCTCCAGTGTTTTAAGA
TTGGCCACAGCAATTCTTTGGTGGGTGTGGGCATTGGCTGTGGCGAAATT
CTGGCAGCGGTGTGGGTTGGGGTAGGAAAGTTCGGTGGGAAAAAAACAGG
CTATCCGAGCCTGATGCTCTGGTCGTAGCCTGATTTTCTGGCATAAAATC
AGGCCCGAACGACCTATTTCTGTTTCACCGGAGATCTCCACCTCAACACA
CACCGCCGGAAAAATCTCGGTACAGCCAAAGCCCGGACCTACCAAAGCTC
CTATACATAGCCAACCTCAGAACACTGGAGCGCACACTCCAACGGCTTTG
ATTGGTTGTCGTGTCCCAGGGGCCGAGTACTGACTTTTGCTGTCTCCTGT
TGTGCTCGACAGGGTCATTTCGACGGGGGGGGGGGTAGGGGTGGTTATCT
GGTTTAATTTGGGCAGGGGGTCGGAAGTCAAACAAAAAAATCCGCGAACC
GCACAGGAAGTAGCATAAAACAGGTGTGCTCCTCGAAAGATCAAGTTGGG
TCTTCACCTGCTTGGCCTCCCCTTGTGCTTGCTCTTCGTGCGCCTACGTG
CAGAACAGAACGCCCCGTGCCCACAAATACAGCATGGCGCGTACTTGAAA
TAACGGTTTTCGTCATCAAAATAACTTCTTGATGACCATACTCTAGCTGC
CCGCTCAAACAAATGTCTCCGTTTCTCCCATTTTCGGGTCCGCGCCCGCA
GAACCTCGCGCCAGTGGGCAAGGGAGGCGGGGAAATGGTGACCGGCACTT
TGGCGGACATGATCGAGGCGCAGTACCACTCGATGGGTGAGCTGACCGAG
AAGATGAGCGCCGCCTCGGTGGGCGTGCAGGGGTCCGGGTGGGGGTGGCT
CGGCTACGACAAGGTCAACAAGCGGTTAGCGATCACAACCTGCGCCAATC
AGGTGCGTGCCCGTGTGTGTCTGTGTCTGGTTTGGCTTTGTGCTTTTCGT
GGCGTCTGTTGCCAACGAGGAAAATATACTTCGTACCTGCTTTTGAGTTG
ATTCATGGGCGTGCGGATTTGTATTATCTGGGTGGGTGGGTGGGTGATGA
GTACAATATGCGTTTTGATATCAGTCGGAGGGGAGTATTAATGTTTCCGG
CGAGCTAGGCTACATGCTTAGGAAAACACGCTCATTTCGCATGTAACTCT
ACATACCCATGCTGCTCGCGTCCGATCGCATTCGATAATTTTGCGTGCGA
AGGACCCCCTCGAAGCCACGACCGGACTAGTACCCTTGCTGGGCATCGAC
GTCTGGGAGCACGCCTACTACCTCCAGTACAAGAACGTCAGGCCCGACTA
CGTCAAGGGTATCTTCAAGATCGTTAACTGGGCGGACGTTCAGGAGCGAC
TCACCGCTGCGACTTCCTGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig211:25541..29360- >mRNA_P-littoralis_Contig211.9.1 ID=mRNA_P-littoralis_Contig211.9.1|Name=mRNA_P-littoralis_Contig211.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=468bp|location=Sequence derived from alignment at P-littoralis_Contig211:25541..29360- (Pylaiella littoralis U1_48)
ATGAGGGACAGAGAGATACACGCAGAGAAACAGGCAGAGACAGACAGAGG
AAGAGGGAGAGAGAGAGAAATAGACACGCAAAGCATAAAGCATTTGCTGA
ACCTCGCGCCAGTGGGCAAGGGAGGCGGGGAAATGGTGACCGGCACTTTG
GCGGACATGATCGAGGCGCAGTACCACTCGATGGGTGAGCTGACCGAGAA
GATGAGCGCCGCCTCGGTGGGCGTGCAGGGGTCCGGGTGGGGGTGGCTCG
GCTACGACAAGGTCAACAAGCGGTTAGCGATCACAACCTGCGCCAATCAG
GACCCCCTCGAAGCCACGACCGGACTAGTACCCTTGCTGGGCATCGACGT
CTGGGAGCACGCCTACTACCTCCAGTACAAGAACGTCAGGCCCGACTACG
TCAAGGGTATCTTCAAGATCGTTAACTGGGCGGACGTTCAGGAGCGACTC
ACCGCTGCGACTTCCTGA back to top
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