mRNA_P-littoralis_Contig1.179.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig1.179.2
Unique Name	mRNA_P-littoralis_Contig1.179.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot
Match: D7G7D2_ECTSI (Sld5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7D2_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 9.390e-118
Identity = 170/189 (89.95%), Postives = 183/189 (96.83%), Query Frame = 1

Query:  286 SGGYYDIDVILSEEVRVPTVFTIDAVGMGMLDPTTSEEDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGVALATLTGDRRLQDTLLMVFSGERFKCLLDCSLNSLNQDVNSFTRDLPNLEKSLFNAGYRTSEEFIDWKSRAFNKLATSKVVQGKVKRQRL 852
            +GGYYDID ILSEE+RVP VFT+DAVGMG+LDPTTS+EDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGV LA+L GD+RLQDTLLMVFSGERFK LLDCSLNSLN+DVNSFTRDLPNLEKSLFNAGYR+SEE++ WKSRAFNKLATSKV+QGKVKRQ+L
Sbjct:    3 AGGYYDIDTILSEEIRVPCVFTLDAVGMGVLDPTTSDEDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGVVLASLMGDQRLQDTLLMVFSGERFKRLLDCSLNSLNEDVNSFTRDLPNLEKSLFNAGYRSSEEYVGWKSRAFNKLATSKVIQGKVKRQKL 191

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BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot
Match: A0A7S2B0C9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0C9_9STRA)

HSP 1 Score: 175 bits (443), Expect = 7.850e-48
Identity = 88/187 (47.06%), Postives = 116/187 (62.03%), Query Frame = 1

Query:  295 YYDIDVILSEEVRVPTVFTIDAVGMGMLDPTTSEEDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGVALATLTGDRRLQDTLLMVFSGERFKCLLDCSLNSLNQDVNSFTRDLPNLEKSLFNAGYRTSEEFIDWKSRAFNKLATSKVVQG-KVKRQRL 852
            Y+ ID I +E+ RVP V  +D   +G LDP  S EDL  G+K++ PLW+   L  K M  ++LPKHY  RF+E LEAGP + NLRE C  Y+ VG  L+ + GD  LQ  L M FSGERFK ++D + +S NQDV   ++   +LE+ LF+AGYR   E ++WKSR    L  S  VQG   KR +L
Sbjct:    3 YFSIDAIAAEDERVPLVAKLDVPRLGFLDPANSHEDLPNGSKIELPLWLGETLHTKKMFVVNLPKHYNARFQEHLEAGPASTNLREHCSNYFTVGEVLSRVKGDDELQKKLRMAFSGERFKRIMDLAFSSHNQDVREESQLFTDLERQLFDAGYRGVHELLEWKSRKQRTLTASSAVQGPNAKRLKL 189

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BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot
Match: A0A4D9D3F9_9STRA (Sld5 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3F9_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.740e-45
Identity = 83/180 (46.11%), Postives = 118/180 (65.56%), Query Frame = 1

Query:  292 GYYDIDVILSEEVRVPTVFTIDAVGMGMLDPTTSEEDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGVALATLTGDRRLQDTLLMVFSGERFKCLLDCSLNSLNQDVNSFTRDLPNLEKSLFNAGYRTSEEFIDWKSRAFNKLATSKVVQG 831
            GY+ +D IL+ E RVP VF   A  +G LDP   +EDL   ++V+ PLW+A  L  K MV ++LP+HY+ RFRE L AGP AV++RER  F+YE G ALA +  D  LQ T+ MVF+G RF+ +LD SLNS   D+  F +DLP+ E++LF+AG + S+    +K     +L  ++V++G
Sbjct:    4 GYFSVDAILAAEDRVPVVFNTMAASLGFLDPACKDEDLPARSRVELPLWLALALQAKNMVRVELPRHYSARFREDLLAGPDAVDIRERSAFFYETGTALARVKRDDHLQRTMRMVFAGPRFRHILDASLNSGGDDMTDFLQDLPHAERALFHAGSQGSKAQEAYKKGTHAQLGIAEVLKG 183

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BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot
Match: K3W7Q5_GLOUD (Sld5 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7Q5_GLOUD)

HSP 1 Score: 169 bits (427), Expect = 1.840e-45
Identity = 82/194 (42.27%), Postives = 122/194 (62.89%), Query Frame = 1

Query:  277 MSISGGYYDIDVILSEEVRVPTVFTIDAVGMGMLDPTTSEEDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGVALATLTGD---RRLQDTLLMVFSGERFKCLLDCSLNSLNQDVNSFTRDLPNLEKSLFNAGYRTSEEFIDWKSRAFNKLATSKVVQGKVKRQR 849
            M+  GGY+DI+ IL+ + R+   F  DA+    LDP+   EDL QG  V+ P+W+A PLAG+G V L++P + T RFR  ++AGP +VNLR+   ++YEVG  L  L  +   + +++ L + F GER++ +L+ S+NSL++D   FTR L   EK LF AG R S +FI WK R    + T+ VV+   KR++
Sbjct:    1 MASGGGYFDINDILAGDERLKCTFATDAIDCAYLDPSCVGEDLKQGTAVELPMWLAEPLAGRGDVALEVPHYLTKRFRRMIKAGPSSVNLRDFTAYFYEVGQHLLPLVDEESGKEIEEILRLSFGGERYRDILNNSMNSLDEDTTEFTRKLTEEEKKLFQAGVRDSNDFIQWKGRKAEVITTAAVVERSTKRRK 194

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BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot
Match: A0A485LTF7_9STRA (Aste57867_25041 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTF7_9STRA)

HSP 1 Score: 159 bits (402), Expect = 6.530e-42
Identity = 80/190 (42.11%), Postives = 120/190 (63.16%), Query Frame = 1

Query:  295 YYDIDVILSEEVRVPTVFTIDAVGMGMLDPTTSEEDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGVA----LATLTGDRRLQDTLLMVFSGERFKCLLDCSLNSLNQDVNSFTRDLPNLEKSLFNAGYRTSEEFIDWKSRAFNKLATSKVVQGKVKRQRL 852
            YY +D +L+EE RV  VF  +A G G +DP+T  +D+ +  K+D PLW+A  LA  G VN+ +P   + R+R  ++AGP A NLR+  P+++E+G A    LA  T  + + D L + F GER+K +LD S+NS ++D   FTR L   EK LF AG   +++F+ W+ R    +++SKVVQ K KR+R+
Sbjct:    3 YYSVDELLAEEERVTCVFQAEAAGCGYMDPSTEGDDILENTKLDLPLWLAAALARHGTVNVQVPTCLSARYRNVIKAGPSAANLRDMNPYFFELGKAVLPLLANETESQEIDDILRIGFGGERYKQILDQSMNSYDEDTTEFTRKLTEYEKDLFQAGVNDAQDFLRWRERKNELISSSKVVQIK-KRKRI 191

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BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot
Match: A0A2D4BLI6_PYTIN (Sld5 domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLI6_PYTIN)

HSP 1 Score: 159 bits (401), Expect = 1.020e-41
Identity = 81/196 (41.33%), Postives = 124/196 (63.27%), Query Frame = 1

Query:  277 MSISGG-YYDIDVILSEEVRVPTVFTIDAVGMGMLDPTTSEEDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGVALATLT--GD-RRLQDTLLMVFSGERFKCLLDCSLNSLNQDVNSFTRDLPNLEKSLFNAGYRTSEEFIDWKSRAFNKLATSKVVQGKVKRQRL 852
            MS+SGG Y+DI+ IL+ E R+   F  DAV    LDP+  + DL  GA V+ PLW+A PLA +G V +++P   T RFR  ++AGP AVNLR+  P+ YEV   +  L   GD + +Q+ L + F G+R++ +L+ S+N+L +D   FTR L   EK+LF AG + +++F+ WK R  + +  + V+Q   KR+++
Sbjct:    1 MSVSGGNYFDINDILAGEERIKCTFQTDAVDCAYLDPSCVDXDLKSGAVVELPLWLAEPLAMRGDVAIEVPSFLTQRFRRIMKAGPSAVNLRDFSPYVYEVAKHVLPLVEEGDGKEIQEILRLAFGGDRYREILNNSMNTLQEDTTEFTRKLTEEEKALFQAGVQDAKDFMHWKGRRADVITAASVIQRSSKRRKM 196

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BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot
Match: A0A8K1FII7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FII7_PYTOL)

HSP 1 Score: 158 bits (400), Expect = 1.340e-41
Identity = 74/193 (38.34%), Postives = 120/193 (62.18%), Query Frame = 1

Query:  283 ISGGYYDIDVILSEEVRVPTVFTIDAVGMGMLDPTTSEEDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGVALATLTGD---RRLQDTLLMVFSGERFKCLLDCSLNSLNQDVNSFTRDLPNLEKSLFNAGYRTSEEFIDWKSRAFNKLATSKVVQGKVKRQRL 852
            +S GY+D++ IL+ + R+   F  DA+    LDP+  ++DL  GA V+ P+W+A PL  +G V L+ P++ T RFR  ++AGP AVNLRE  P++YEV   L  L  +   + +++ L + F G+R++ +++ S+NSL++D   FTR L   EK LF AG   S++F  WK R  + ++ + V++   KR+R 
Sbjct:    1 MSAGYFDVNDILAGDERIKCTFQTDAIDCAYLDPSCVDDDLKSGAVVELPMWLAEPLTLRGDVTLEAPQYLTKRFRRIMKAGPSAVNLREFSPYFYEVAKHLLPLVDEVEAKEIEEILRLAFGGDRYRGIMNNSMNSLDEDTTEFTRKLTEEEKKLFQAGVHDSKDFTQWKGRHADVISAASVIERSSKRRRF 193

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BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot
Match: D0MZ59_PHYIT (Sld5 domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0MZ59_PHYIT)

HSP 1 Score: 157 bits (396), Expect = 4.960e-41
Identity = 78/193 (40.41%), Postives = 121/193 (62.69%), Query Frame = 1

Query:  283 ISGGYYDIDVILSEEVRVPTVFTIDAVGMGMLDPTTSEEDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGVALATLTGDRR---LQDTLLMVFSGERFKCLLDCSLNSLNQDVNSFTRDLPNLEKSLFNAGYRTSEEFIDWKSRAFNKLATSKVVQGKVKRQRL 852
            +SGGY DID IL+E+ R+   F  +A+  G LDP+    DL++GA V+ P+W+ARPLA +G V+++ P + T RFR  L+AGP +VNLRE   +  +VG  L     D     + + L + F GER++ LL+  ++SL++D   FTR L   EK LF+AG R +++FI WK R    ++ + VV+  +K+++ 
Sbjct:    1 MSGGYLDIDAILAEDERIKCKFDTNALDCGYLDPSCLNPDLAEGAVVELPMWLARPLAQRGDVSVEPPHYLTKRFRRMLKAGPSSVNLREFSSYVLDVGRQLLPYVSDEEQGEIDEILRLCFGGERYRDLLNNVMSSLDEDTTEFTRKLTQDEKKLFDAGIRDAKDFIQWKGRNAEIISAATVVERSLKKRKF 193

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BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot
Match: A0A6G0WZH2_9STRA (Sld5 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZH2_9STRA)

HSP 1 Score: 155 bits (393), Expect = 5.050e-40
Identity = 74/192 (38.54%), Postives = 123/192 (64.06%), Query Frame = 1

Query:  295 YYDIDVILSEEVRVPTVFTIDAVGMGMLDPTTSEEDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGVA-LATLTGD---RRLQDTLLMVFSGERFKCLLDCSLNSLNQDVNSFTRDLPNLEKSLFNAGYRTSEEFIDWKSRAFNKLATSKVVQGKVKRQRL*H 858
            YY ++ +L+EE RV  VF  +A G G +DP+T  +D+ +  K++ P+W+A PL+  G V +++P+  + R+R  ++AGP A NLR+  P+++E+G A L  L  D   + ++D L + F GER+K +LD S+NS ++D   FTR L   EK LF AG   + +F+ W+ R    ++++KVVQ  +K+++L H
Sbjct:    3 YYSVEELLAEEERVKCVFQAEAAGCGYMDPSTEGDDIMENTKLELPMWLAAPLSKHGTVQIEVPQCLSTRYRNVIKAGPAAANLRDMNPYFFELGKAILPHLVNDGDVQEIEDILRVAFGGERYKMILDQSMNSHDEDTTEFTRKLTEFEKQLFQAGMNDANDFLRWRERKNEVISSAKVVQ--IKKRKLSH 192

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BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot
Match: A0A067CUR5_SAPPC (Sld5 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CUR5_SAPPC)

HSP 1 Score: 150 bits (380), Expect = 8.470e-39
Identity = 77/189 (40.74%), Postives = 111/189 (58.73%), Query Frame = 1

Query:  292 GYYDIDVILSEEVRVPTVFTIDAVGMGMLDPTTSEEDLSQGAKVDFPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEVGVALATLTGD----RRLQDTLLMVFSGERFKCLLDCSLNSLNQDVNSFTRDLPNLEKSLFNAGYRTSEEFIDWKSRAFNKLATSKVVQGKVKRQ 846
            GYY +  +++EE R+  VF  DA   G LDP++  +DLS   K++ PLWMA  LA    V   +P     RFR  ++AGP A NLR+  P+Y+EVG  +  L  D    R + + L + F GER+K +LD S+NS ++D   FTR L   EK LF AG   +E+F+ WK R    +A +KV+Q K +++
Sbjct:    2 GYYSVAELIAEEERIQCVFQTDATDCGFLDPSSLGKDLSMDTKLELPLWMASALARHNTVKTLVPTCLNSRFRNVVKAGPSAANLRDMNPYYFEVGKQVLPLIEDEDEGRAIDEILRVAFGGERYKAILDQSMNSHDEDTTEFTRKLTEYEKDLFLAGVDDAEDFLRWKGRENGLIACAKVIQMKKRKR 190

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1.179.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7D2_ECTSI	9.390e-118	89.95	Sld5 domain-containing protein n=2 Tax=Ectocarpus ...	[more]
A0A7S2B0C9_9STRA	7.850e-48	47.06	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A4D9D3F9_9STRA	1.740e-45	46.11	Sld5 domain-containing protein n=3 Tax=Monodopsida...	[more]
K3W7Q5_GLOUD	1.840e-45	42.27	Sld5 domain-containing protein n=1 Tax=Globisporan...	[more]
A0A485LTF7_9STRA	6.530e-42	42.11	Aste57867_25041 protein n=1 Tax=Aphanomyces stella...	[more]
A0A2D4BLI6_PYTIN	1.020e-41	41.33	Sld5 domain-containing protein n=2 Tax=Pythium ins...	[more]
A0A8K1FII7_PYTOL	1.340e-41	38.34	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
D0MZ59_PHYIT	4.960e-41	40.41	Sld5 domain-containing protein n=12 Tax=Phytophtho...	[more]
A0A6G0WZH2_9STRA	5.050e-40	38.54	Sld5 domain-containing protein n=1 Tax=Aphanomyces...	[more]
A0A067CUR5_SAPPC	8.470e-39	40.74	Sld5 domain-containing protein n=2 Tax=Saprolegnia...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1	contig	P-littoralis_Contig1:958885..966117 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7G7D2
Preferred name	GINS3
PFAMs	Sld5
Model size	1799
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K08869,ko:K10734
KEGG Module	M00286
Hectar predicted targeting category	other localisation
GOs	GO:0000228,GO:0000278,GO:0000724,GO:0000725,GO:0000727,GO:0000785,GO:0000790,GO:0000811,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006271,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007049,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0022402,GO:0022616,GO:0031261,GO:0031298,GO:0031974,GO:0031981,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044786,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071162,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902292,GO:1902315,GO:1902969,GO:1902975,GO:1903047
Exons	4
Evalue	3.08e-123
EggNOG OGs	COG5138@1\|root,KOG1106@2759\|Eukaryota
Ec32 ortholog description	GINS complex, subunit Psf3
Ec32 ortholog	Ec-04_003250.1
Description	DNA replication
Cds size	579
COG category	S
BRITE	ko00000,ko00002,ko01001,ko03032

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1.179.2	prot_P-littoralis_Contig1.179.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig1 959829..965841 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789315.4706318-UTR-P-littoralis_Contig1:958884..959828	1680789315.4706318-UTR-P-littoralis_Contig1:958884..959828	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig1 958885..959828 -
1680789315.5293741-UTR-P-littoralis_Contig1:965841..966117	1680789315.5293741-UTR-P-littoralis_Contig1:965841..966117	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig1 965842..966117 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789315.4848025-CDS-P-littoralis_Contig1:959828..960110	1680789315.4848025-CDS-P-littoralis_Contig1:959828..960110	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 959829..960110 -
1680789315.4989078-CDS-P-littoralis_Contig1:961409..961479	1680789315.4989078-CDS-P-littoralis_Contig1:961409..961479	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 961410..961479 -
1680789315.5099163-CDS-P-littoralis_Contig1:962859..962942	1680789315.5099163-CDS-P-littoralis_Contig1:962859..962942	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 962860..962942 -
1680789315.5196352-CDS-P-littoralis_Contig1:965697..965841	1680789315.5196352-CDS-P-littoralis_Contig1:965697..965841	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig1 965698..965841 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig1:958885..966117-
coding sequence from alignment at P-littoralis_Contig1:958885..966117-

protein sequence of mRNA_P-littoralis_Contig1.179.2

>prot_P-littoralis_Contig1.179.2 ID=prot_P-littoralis_Contig1.179.2|Name=mRNA_P-littoralis_Contig1.179.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=193bp
MSISGGYYDIDVILSEEVRVPTVFTIDAVGMGMLDPTTSEEDLSQGAKVD
FPLWMARPLAGKGMVNLDLPKHYTDRFREQLEAGPGAVNLRERCPFYYEV
GVALATLTGDRRLQDTLLMVFSGERFKCLLDCSLNSLNQDVNSFTRDLPN
LEKSLFNAGYRTSEEFIDWKSRAFNKLATSKVVQGKVKRQRL*

mRNA from alignment at P-littoralis_Contig1:958885..966117-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig1.179.2 ID=mRNA_P-littoralis_Contig1.179.2|Name=mRNA_P-littoralis_Contig1.179.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7233bp|location=Sequence derived from alignment at P-littoralis_Contig1:958885..966117- (Pylaiella littoralis U1_48)
CTAGACTACTACAGATACCAAGCCCGCCAGGTCGGCCTGGTCGTCTGGTC
CGTCCATACCTGTTTGAGCACCTGAACGATTTCTGGAAGACAAAGCAACC
AGCTGGTCGGTGGGACGCACAGAGGAAACAAGAAACCGGTCGAGACACCA
GTGCCCCCAAAAAAAAACGGTTTGAAATTTGAACAACCGAGACGGCAGCA
CAAAGAAGGGCAACACAACGGCCTGCTGTGTAGATATCAGATTACACAGC
AGATAGAGAAGGAGGAAGAGAGGAAGATGAGCATATCAGGGGGCTACTAC
GACATCGACGTCATCCTCAGCGAGGAGGTTCGGGTGCCCACCGTGTTCAC
GATCGACGCCGTGGGAATGGGCATGCTAGATCCGACCACATCCGAGGAAG
ACCTTTCACAAGGGGCGAAGGTATTTAGCACATCGTGGTCGTCATGTATG
TGGCGTGTGTCATAGGCAGGAATTAATGCCCGGATGCATGATACTGCACG
ATACTGAACTTTCAGCAAAATAATTTATAGGCAGGGATCGTGCATCATTC
GAAGTACATACATTTAGTTGGAGCGGAGTGCGCTCCTCTTTTTTCCTTTG
TTTCGTTTGGGACCTGGAACCAGGGTATTTCAGCGGGGCAACCCGAGTAG
CCCGGGTTCTAAAAAAACTGAATCAGCCGGTATTCCACCGCCCGAGAACC
AGACACAAACCCAGCTCAGCTCTTGGCTCCGCGTGCACAAATCATGAGAA
AATTGACATGTGAGCACCTCACAGTTATTCAGCCAGGGTCACGAACAAGG
TCTCGCAACAGGCTGGTAGCGTCCCTGGAGAGACTAGGAGAGTTCACCGA
TGATCGCGATGCCGCCCCCTGCTCTCAATATCACGAAATGATAACTGGTC
ATCACAGGCACACCTCTCCTATACCCAAATGAAATCAAGTCAATTCAGGA
ATGGCTCATTTTTTTAGCGCATTTTTGTCCACTGCTGTAGCCCACAACCT
TCATTTTGTCAATCTGGGGCACAGCAGGATGCATGTAGCAGGCCCTGCGG
TGGTTGGAAGACTGCTGTGTGTTGCTCGTGTTCGATACTGCTGGTGCGGT
GTATCTTTGATAATCAGTGGTGTATACAACTCCATCGCGTTCTTTGGTTC
GGGATTTCTTTGTTGTTTTCGTCCCCCATCCCGGACTCCACCCCCATGTC
CCAACGAGACCGCCCCAAGAAAAAATAAAATAAAATGAACTATTTTCAGT
GAAGAAAAAAATGCACCCAAGACCCAGAAGGTTAACATCACATATCACAT
CATACAGCTGGTTCCTCCTGTACAGTAGTACGGTAATGGAATTAGGTTCT
GCTCGCCGAGCCCCTCGTCACTTTCTTCATTCTCGATGATCCGTCTTTCG
CGAGATCACACCCATCCCCTGCTGGACCAACTTTAAAGCTCAAACAACAG
CAGAACTGCTATGCATATAGCAGTAGCAGCACAGCAAGCAAGCAGCAAGC
AGTGTTGTTGTCACAGGCGTTTGAAAAACTAAAATAAAACTCACCGGGGT
CCGGGGAAGAAGAACAAAAACATATCATATACCGTTACTTCGTATGAAAG
ATTGGAAAAGCCTCGTGAATCTCAAGAAACATTTTTGTTTCATAGGCATA
CGCAGCAAGAAGTATCGACCACAGACGGCTCGAGGCACAAGGGGGGGGAA
GGGAAGAACATCTCGACCGAGGGGTATCGAACCGCATCGGGGACTTGAGC
AAGGCTGCTAAAATGTACCAGGTACATACACACTACGAAGAAAAAGAGAA
ACGAGACAAGAGGGTCAGCCGCTGTGAGTGGTTGTCGCGGGACATCGCGT
AGGAGAGTGAAATTGCCCCCCGCGAAAAAGTGCACCTGGTACCAGACAGT
CCGTGGACCAGTTCGAATCACGATTGTGCCGCATGCTTTGTCACACGCGC
GAGGTTCCGCGTGCGGACTTTCTGCTGGAGATTTCGAAGTAAAAACAAGT
GCGCCATGTATCGACGATTCCTCGAGCCACCGACCTTGATTGAACCCACA
AGCTTTTGCCGAATGCTCCTGCTTGCCAACGACCTACCCAAACTCTCTGG
GGGCCAGGGACTTTCTTTTCGCGTGGGAGGGTGCTTTTGGGTCCCGACGA
TCTTCAAGGCACGCAGGGGTTTAATCCGTTGGAAGGCAAGGCACAACTGT
CCGTGCACACCCTGTAACACCGTAGACAGTAGCAAGTCCTTTCCTTCAGC
TTCTGTGATTACCGCCCAGCCGAGAACGACGAGGGTGGGGGGGGCGGTAG
CGAGGCTGGATATATGCCTGGTGTCACGGGCACGGGACTGATAACACACT
AACATTAACCCCGCTTTCAACAAAAAAGGCCTCATTTACCTCTGATGACT
TTTTCATCTTACCGACGCGTTTTTTTTTCACCCCACCCGCCAGCCACCGC
CGTGCCATTTCCCCCACGTTCTTTTCGCACCCAATCACGATCGATGCAGT
CCTGTCTCCAGCCACTCGTGGGTACCATCACAAAGTCACGGCGGTGGGCT
TCCTCGCGCTGGGCATCGAGAAATGTGTAGTACGAAGGAAAATAAAGTAA
AGAACACACACACATACGCACGCACGCACGCACGCAGACACACACACACA
AATTCTCCCTGAAGCACAAGTATCCGAGGGCGACTGGCGCTACTACTGTA
AAAATCGTCTCGTCGCGAGAGCTTTTCGAAGTGTCGACAGACATCATTTG
GCACCGTACCGCTGCACGATCATTCGTTTTTGAAGTAATCGAACGTTGAA
AATTGGTCGAAGCAGAGGTGCTCGGCATCTCACACGACCTTTTCGTACAG
GACGTGAAGTTCCACTCATCATCATGAAGCAAGTGTCGTGCTCCGTCAAT
ACACAGCACATAGACCGCCGTATATTTCGTTTTGCGCGGTACAAAGCCAG
TCAGCTGCAGCTCCTGCATGCAGCAGAGCAATGATTTAAACTACTGCTGT
CTTGCCGCTGTATTCCCCCTCAAGAAAAGACGTTGCTCTCGATCTCTCTT
TGCTCTTCGGTCCTTTTCGCTTCCTTCTCTCGCTCCTGTAGCTAGCCCGT
CTACGTTGTTGCCTGCTGTGCTGTGTGGCCCAACCCGACCCGACCCGCGT
GCGGCGCGACCTTAAAACCGAACAGGTGGACTTTCCACTGTGGATGGCCC
GACCTCTCGCTGGCAAGGGAATGGTGAACCTGGACTTGCCGAAGCACTAC
ACAGACAGGTACCTTTCACAGGCAGAGAGTGTCATACATACGTCTGAATC
TGCACCGCACAGATGAGACTCTGGTTGGTTCCCCGAGGTCCCACACGAGG
AAGCGTGCGTACCTGTACCCGTAGAGTCGGTCGGTCTCCTCGAACGGGCA
TACACGCCCATCATAAAAGATAATTGCAGTTTCACGTCGTCAGAGCATTG
GATACTAGAGGATCGGGGTTGAGAAGCAGTGTGCGTTGGAGGGCCGCTTC
TCAAATAACTGCGTTAAGCCGTGTGCGTTGCTATTTGGTGGCGTATGATA
TGTCCCAGCAGTGCTGCTGCTGCAGAAGACAGCTGGTGGTGTGCTGGTGT
GCGTGTGCGCCAGCACAACGAACACAAAACGCCTCTCATCATTTGTCACA
AAAAAGGGGCCCCAAAAATAACGCGCTGCTGACAAGATAGCTGTGCGCAC
AGGACACGGGCTGCGATGGACCCAGCAGCAGTGGGTAGATGTTATTTACC
TCTTCAGTTCAAGCCCTTGGTCGTAGCGATCTGTGCTGAACTGGTGTCAA
AGTGTTGCAAAATGTGGCCATATTCTCGGACACACAGACACCGAAAACCT
CCAAAATTAAATAAAGGCTCCCCCATGGCAGAATTAACTTTATTTTTTTA
TTCGCACATACACTCACACCTGCACATCACGACAAGTCGGTATGAATTCG
AAGCAGTTCGACAAGGAACTTACACTTCGCTTCGCTCGTGGCCTGCTCCT
CAATAAAACATCAAGTACAAAACACCAAATGCAGCAAAGGTATGAGGTTT
CATGTGATCTTCTGCTGTGCGCTTGAACTACATACTTGTACCGTGTTTGG
TGTAGCGCGGGAGACGCAAATCCCCACGAAATAAGAATTAAACATTGGCC
TGAGCCGGGTTTATTCCACGTTTCTTGTGAGCGGACGGGGCCGGGCCGTA
CCACTGTGTCACATCATGTTTTATGTGTGTGTAAGACCGGTCGCCCCGGT
GGTCCAGTGGTTCCCTCTTCAGCCTGCAAGGAGTAAGGTTGCAGGTTCGA
TTCTCTCTGAGAGCGTTTTCTTGCAACTTTACAGCAGTGGATAGCGAATT
CCTCGTGAGTGAACAGAGGAAAGGGAGTGCTGAACCCTACCGCATGTGGC
AATAAATAAAATAAAAATAATTAAAGGCTTGTGTGCGTGACCTTCCTTCT
GTGCGACTCCGGCTGGTGCACCCGCCTCATACCGAAAGGTGTAGAGACCG
CTGCCCAGAATATATGGGATGAACACACACACACAGAAGAAAGACAGAGA
GCAACAGAGAGAGAGCAAGGTTGAGATAGCAATAAAGCGATAGGACGACA
CACGAACCCCGCGGTTTGTCGTGTGCGCTCTAACTCAGGTTCCGAGAGCA
GCTGGAGGCCGGCCCCGGCGCAGTCAACCTCCGAGAGCGGTGCCCGTTCT
ACTACGAGGTACAGCAGTACGTTGTTGGGTGTGTATGCTTTTCTGGAGGG
GGCCTGCTCTGGGTAGCGGGGTACCGTAGGTCGCATGAGGTACCACATCG
GGCCCCCCGGACCACACTTCGAAGCTCGATTACCGCACTCCGCGGCAGAA
CGAGTTCCGGCACAAGTAGTTGTAGTCCGGTACCGTTAGGGGCGACCGAC
GTTGGAACCCCAACCGTCTCGTCGAGAACTTTCAGAATAGCGCAGACATT
GTTTGGTGTTTGAGGTTTTGATAGCACCGTCATCGTCGCGGGCGTAGCCG
AGCGTTGGAGATTGGTCCAAGGGTTTTGCGGTGTCTTGACCGACCTTCGA
CATGATAACGGTACTTTGTACGCATGCGTTTGCGGTGCAATGCAGTTTCG
TGTTTGTTTCACCAGGCCTTGTACCAAGGAACCGAAAAATAGTGAGGCCG
CGGACAGTGCCGTGGTTGAATGTGCTGCATGTAGATGCACTAGCGTAAGC
CTACCTATCACACGTTGGTTACTGACGCTTCCAGTCACTAACTTTGGTGG
TTGAGATTATTCTTGCGAGTATGTAAGTACAGCAGGGCGAACGAAGCACA
CAGAGACACAAAATAAAAAAACCGACCCATGTTGATGGGATGTCCCAGAT
GGAAACATGTGCCTTGTAAACGTGCTAAAAACAATTTATCGTGGTGTTCA
GTTTGTACCTGGTATTATGTGATACTTTCGCACAGCGATCTCTATTTTCC
TAACCGATTATTTATCTGGAGAGAAAGCCAATGCCGTTGCAAATATTGAA
AGAGATTGCTTTGATGAAATCATTACTCGGGTATCTCCCCGGGGGGGGGG
CTTTCCGGAGACGTGTCATTGTTCTACTTCGGGACCCCGCTGCCCGTTGT
CGAGAATTGGGGGCGCGATTCCGACCGCACGCCCCTGTCTGTGCGAGACA
ACCAAAGAGAGTGTTTGCGGTGTAGGGGTTGGGATTGCTGCTGCTACTGT
GGTATTTGGTGCTGGCGTTTAGTAAGAGCGAGCGAAACTCGGACCCGACC
ATGAGCCCAAAACAAACAGGCTCGCGTTGTGGCGGATTTTAGACGTTTGT
GTGTGTGTGATGATAAAATAAAGGGACCGTGTTGAATGTAGGGAGGGGTC
TGTTGGCTTACTACATCGAAGTGCGATATTTCTGCCTTTTTGTTGAAAAC
GCGTCAGGAACGCTCGATGGGTGAGCATTTTGTTATGGCTTTGTAACGAC
CAAAACGCTTCGTCTGTGATTTCGCATACACTCCACACGAATGACGCACG
GACACAGGTGGGCGTGGCGTTAGCCACCCTCACGGGGGACCGGCGGCTGC
AGGACACGCTGCTCATGGTTTTCAGCGGAGAGCGCTTCAAGTGCCTGCTG
GACTGTTCGCTCAACAGCCTGAACCAGGACGTGAACAGCTTCACGAGGGA
CCTCCCCAATCTTGAGAAGAGCCTCTTCAATGCCGGCTACAGGACATCGG
AGGAGTTCATCGACTGGAAGTCCCGCGCTTTCAACAAGCTTGCCACTTCC
AAAGTCGTTCAGGGGAAGGTCAAGCGGCAGAGATTATAGCATTGTTAGTG
GACCAGTCGTGCGCGTGGTTGCCCAAATTGTTTGGAACATAAGAGGGGGG
GGCGGCGATATAAAGCGAGATGAGTAGTATAAGGTCATGACGAGTCGTGT
GGGTGCGTGCGTGTGCTTTACAGCGGCGATATTTTTTATTTTTTAGAACA
ACAAAGGTTGGGGGTTTTATACGACGGGTCGGTGATCAAAAACTTTACGC
TCGGGTGCAGTAGGAAAGTAGGATGAAAAACAGCACAAATGCGCATAACG
CGGTGATTCGCCGCTGGTCTGCTACTTACTCCCAGGCGGGGTTTGGGGCC
TTGCGGGGGGGAGGGGAGGTTAGAGTGTACCTTTCTCTCCCTCAGAAGCT
CGTGTCTCTGTTTGCTGGGACCCACAACTCTCATGGTCGGCTTGTGTGTT
TTGGTCCGTTTGGCTGTCTTTGTTCTTGAGGTAATTTCCGCGTCAAGTCA
GCTTTTTTTTCTTGTCGGTGTGCGGACGAACAAATATTTTTACAGGGGGC
ACATTGAGATGTTTTTTCAAACACTGCTGTAGCTCCCTGGTACCATTTTT
TGCTTGACTGCTGGAGCTCGAGGCTTCCCTTGCAACGAAGCATCTTTTTT
TTTTTTTCTCTCACGCGATTTGAAACCTTGGGTTCTTTGTCGGGCGTGTG
GTGTTTCTGGTGGTGGTCGCAAGCACGGGTGGTGACGATCGGCCTCACAC
TCGTACCTTTTTGGTGCTCCAATCAAATCCGTCTTCCTTCCAAGGTATTT
TGAGCAGGATTGTCAATGTTCCCAATCTTGAGCGAGTACAGGCACTAAGC
AAGCCTTGGCAAATTGTTGGTGTGCAACATAAGATCCCATGATATTCTGG
AATATTTTGGACTTTTACGTACCCTTCCCTCTCCCCTCGCACCCTTCCAA
ATATTGTCCAAGTTAGTACCCCCCTCCCCCCCC

Coding sequence (CDS) from alignment at P-littoralis_Contig1:958885..966117-

>mRNA_P-littoralis_Contig1.179.2 ID=mRNA_P-littoralis_Contig1.179.2|Name=mRNA_P-littoralis_Contig1.179.2|organism=Pylaiella littoralis U1_48|type=CDS|length=579bp|location=Sequence derived from alignment at P-littoralis_Contig1:958885..966117- (Pylaiella littoralis U1_48)
ATGAGCATATCAGGGGGCTACTACGACATCGACGTCATCCTCAGCGAGGA
GGTTCGGGTGCCCACCGTGTTCACGATCGACGCCGTGGGAATGGGCATGC
TAGATCCGACCACATCCGAGGAAGACCTTTCACAAGGGGCGAAGGTGGAC
TTTCCACTGTGGATGGCCCGACCTCTCGCTGGCAAGGGAATGGTGAACCT
GGACTTGCCGAAGCACTACACAGACAGGTTCCGAGAGCAGCTGGAGGCCG
GCCCCGGCGCAGTCAACCTCCGAGAGCGGTGCCCGTTCTACTACGAGGTG
GGCGTGGCGTTAGCCACCCTCACGGGGGACCGGCGGCTGCAGGACACGCT
GCTCATGGTTTTCAGCGGAGAGCGCTTCAAGTGCCTGCTGGACTGTTCGC
TCAACAGCCTGAACCAGGACGTGAACAGCTTCACGAGGGACCTCCCCAAT
CTTGAGAAGAGCCTCTTCAATGCCGGCTACAGGACATCGGAGGAGTTCAT
CGACTGGAAGTCCCGCGCTTTCAACAAGCTTGCCACTTCCAAAGTCGTTC
AGGGGAAGGTCAAGCGGCAGAGATTATAG