prot_P-littoralis_Contig210.53.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig210.53.1
Unique Nameprot_P-littoralis_Contig210.53.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length263
Homology
BLAST of mRNA_P-littoralis_Contig210.53.1 vs. uniprot
Match: A0A6H5K2N3_9PHAE (WSC domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2N3_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 5.320e-94
Identity = 136/256 (53.12%), Postives = 165/256 (64.45%), Query Frame = 0
Query:    6 NEKYASLGCFKDNKDDRILGYKMSDGHMTTDMCYAYCSGMAAPFMATQFGIECWCATEVTVEYKRHGEGAD-CSYTCGGNEDEKCGGYNALNLYSIEPVASTKGGVRRGDEVHAQLGYDQTAEYSSSRAVSRGRTEGALVPDIVKIIDVVGDDPRGASWADSYSVGGVCYMQSSFDHDIGDVKVETPLGAMTIKALYDLLPDGPSSHERPLYNDIQCGNGPANTAPDEARCPGLVEHGRAGCGQIGPMWDLTVLET 260
            +  Y  LGCF D K DR++G+K++D  + T+ CY YC G  AP MATQ+GIECWCATEV +EY+RHGE  + C Y CGG++ E CGGYNA +LY IE + + +                              R +GA+  DIVKIIDV GD+P GA WADSYSVG  CYM ++FDH IG+  V+TP+G M I+ LYD+L  GP S   PLYNDIQCGNGPAN A DE  CPGLV  G  GCGQIGP WDL+ LE 
Sbjct:   39 DRNYTHLGCFVDKKSDRVMGHKIADEEVDTEFCYDYCLGENAPLMATQWGIECWCATEVDLEYERHGEAEELCDYKCGGDKTENCGGYNAFDLYVIESLTTIE------------------------------RPDGAMNDDIVKIIDVPGDNPGGAGWADSYSVGSKCYMSTTFDHGIGEQLVDTPIGEMKIRDLYDMLEKGPGSAGHPLYNDIQCGNGPANDAADETNCPGLVMEGPEGCGQIGPKWDLSELEA 264          
BLAST of mRNA_P-littoralis_Contig210.53.1 vs. uniprot
Match: D8LNN0_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN0_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 1.130e-92
Identity = 136/251 (54.18%), Postives = 162/251 (64.54%), Query Frame = 0
Query:    9 YASLGCFKDNKDDRILGYKMSDGHMTTDMCYAYCSGMAAPFMATQFGIECWCATEVTVEYKRHGEGAD-CSYTCGGNEDEKCGGYNALNLYSIEPVASTKGGVRRGDEVHAQLGYDQTAEYSSSRAVSRGRTEGALVPDIVKIIDVVGDDPRGASWADSYSVGGVCYMQSSFDHDIGDVKVETPLGAMTIKALYDLLPDGPSSHERPLYNDIQCGNGPANTAPDEARCPGLVEHGRAGCGQIGPMWDLTVL 258
            Y  LGCF D K DR+LG K++D  + T+ CY YC    AP MATQ+GIECWCA EV ++Y+RHGE  + C Y CGG+  E CGGYNA +LY IE + +    +  G                     S GR +GA+  DIVKII+V G  P GA WADSYSVG  CYM ++FDH IG+  V+TP+G M I+ LYD+L  GP S  RPLYNDIQCGNGPAN A DE  CPGLV  G AGCGQIGP WDL+ L
Sbjct:   42 YTHLGCFVDKKSDRVLGNKLADEEVDTEFCYDYCEEQNAPLMATQWGIECWCANEVDLDYERHGEAGELCDYKCGGDNKEICGGYNAFDLYVIESLTTID--IDDGPSPTXXXXXXXXXXXXVQEEESDGRPDGAMNDDIVKIIEVPGATPGGAGWADSYSVGSKCYMSTTFDHGIGEEVVDTPIGEMKIRDLYDMLQAGPGSAGRPLYNDIQCGNGPANDAADETECPGLVTEGEAGCGQIGPKWDLSEL 290          
BLAST of mRNA_P-littoralis_Contig210.53.1 vs. uniprot
Match: D7FZB0_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZB0_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 2.070e-90
Identity = 135/254 (53.15%), Postives = 161/254 (63.39%), Query Frame = 0
Query:    6 NEKYASLGCFKDNKDDRILGYKMSDGHMTTDMCYAYCSGMAAPFMATQFGIECWCATEVTVEYKRHGEGAD-CSYTCGGNEDEKCGGYNALNLYSIEPVASTKGGVRRGDEVHAQLGYDQTAEYSSSRAVSRGRTEGALVPDIVKIIDVVGDDPRGASWADSYSVGGVCYMQSSFDHDIGDVKVETPLGAMTIKALYDLLPDGPSSHERPLYNDIQCGNGPANTAPDEARCPGLVEHGRAGCGQIGPMWDLTVL 258
            N  Y  LGCF DN+ DR+LG+K+ D  + T+ CY YC    APFMATQ+GIECWCATEV +EY+RHGE  + C Y CGG+ +E CGGY A +LY IE   +                               G  EGA+  DIVKII+V G +P GA WADSYSVG  CYM ++FDH IG+  V+TP+G + I+ LYD+L  GP S  RPLYNDIQCGNGPAN A DE  CPGLV  G  GCGQIGP WDL+ L
Sbjct:   44 NRDYTHLGCFVDNQSDRVLGHKLVDEEVDTEFCYDYCLEKNAPFMATQWGIECWCATEVDLEYERHGEAEELCDYKCGGDNNEICGGYYAFDLYEIESFTTID-----------------------------GPPEGAMNDDIVKIIEVPGANPGGAGWADSYSVGSKCYMSTTFDHGIGEELVDTPIGEVKIRDLYDMLEAGPGSVGRPLYNDIQCGNGPANDAADETECPGLVMEGPEGCGQIGPKWDLSEL 268          
BLAST of mRNA_P-littoralis_Contig210.53.1 vs. uniprot
Match: D8LTU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU7_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.220e-49
Identity = 84/127 (66.14%), Postives = 97/127 (76.38%), Query Frame = 0
Query:  135 SRGRTEGALVPDIVKIIDVVGDDPRGASWADSYSVGGVCYMQSSFDHDIGDVKVETPLGAMTIKALYDLLPDGPSSHERPLYNDIQCGNGPANTAP--DEARCPGLVEHGRAGCGQIGPMWDLTVLE 259
            S    EGA   DIV+II+V G DP GA WADSYSVGG CYMQ++FDHDIG+V+V+TP G M I+ L++LL  GP S  RPLYNDIQCGNGP N+    DE  CPGLVE+GR GCGQIGPMWDL+ LE
Sbjct:  251 SAATPEGAFSEDIVQIIEVEGTDPGGAYWADSYSVGGKCYMQTTFDHDIGEVEVDTPQGTMKIEDLFNLLEPGPGSEGRPLYNDIQCGNGPVNSDSLGDEFLCPGLVEYGREGCGQIGPMWDLSELE 377          
BLAST of mRNA_P-littoralis_Contig210.53.1 vs. uniprot
Match: D8LTU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU8_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 1.040e-42
Identity = 80/122 (65.57%), Postives = 92/122 (75.41%), Query Frame = 0
Query:  140 EGALVPDIVKIIDVVGDDPRGASWADSYSVGGVCYMQSSFDHDIGDVKVETPLGAMTIKALYDLLPDGPSSHERPLYNDIQCGNGPANTAP--DEARCPGLVEHGRAGCGQIGPMWDLTVLE 259
            EGA   DIV+IIDV G  P GASWADSYSVG  CYMQ++FDH IG+V+V+TP G M I+ L+ LL  GP S  RPLYNDIQCGNGP N+    DE  CPGLVE+G  GCGQIGP+WDL+ LE
Sbjct:  765 EGAFSEDIVRIIDVEGVVPGGASWADSYSVGSKCYMQTTFDHGIGEVEVDTPQGTMKIEDLFFLLEPGPGSEGRPLYNDIQCGNGPVNSDNILDEIVCPGLVEYGIEGCGQIGPLWDLSELE 886          
BLAST of mRNA_P-littoralis_Contig210.53.1 vs. uniprot
Match: A0A6H5JZU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU9_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 1.270e-41
Identity = 75/122 (61.48%), Postives = 90/122 (73.77%), Query Frame = 0
Query:  140 EGALVPDIVKIIDVVGDDPRGASWADSYSVGGVCYMQSSFDHDIGDVKVETPLGAMTIKALYDLLPDGPSSHERPLYNDIQCGNGPANTAP--DEARCPGLVEHGRAGCGQIGPMWDLTVLE 259
            EGAL  DIV+IIDV G  P GASW+DSYSVG  CYMQ++FDHDIG+V V+ P G M I  L+DLL  GP S ++PLYNDIQC NGP N+    D+  CPGLV++G   CGQIGP+ DL+ LE
Sbjct:  146 EGALSEDIVRIIDVEGVVPGGASWSDSYSVGSKCYMQTTFDHDIGEVVVDPPQGPMKIGELFDLLELGPGSQDQPLYNDIQCENGPTNSHQILDKILCPGLVQYGIKDCGQIGPLRDLSELE 267          
BLAST of mRNA_P-littoralis_Contig210.53.1 vs. uniprot
Match: B7GED4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GED4_PHATC)

HSP 1 Score: 144 bits (363), Expect = 2.370e-37
Identity = 68/117 (58.12%), Postives = 79/117 (67.52%), Query Frame = 0
Query:  145 PDIVKIIDVVGD-DPRGASWADSYSVGGVCYMQSSFDHDIGDVKVETPLGAMTIKALYDLLPDGPSSHERPLYNDIQCGNGPANTAPDEARCPGLVEHGRAGCGQIGPMWDLTVLET 260
            PDIV +IDVVG   P G SWADSYS G  CY  ++FDHDI DV VETP G MTI+   +LL  GP    RP+YNDIQCGNGP N A DE  CPG  + G  GCGQIGP W+   +++
Sbjct:  203 PDIVAVIDVVGGVTPNGRSWADSYSFGNKCYCATTFDHDIADVLVETPQGWMTIRQACELLGPGPGIEGRPVYNDIQCGNGPPNNAGDEHVCPGRTDLGPEGCGQIGPRWNFDAIKS 319          
BLAST of mRNA_P-littoralis_Contig210.53.1 vs. uniprot
Match: D8LRJ2_ECTSI (Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ2_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 2.250e-34
Identity = 57/97 (58.76%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    6 NEKYASLGCFKDNKDDRILGYKMSDGHMTTDMCYAYCSGMAAPFMATQFGIECWCATEVTVEYKRHGEGAD-CSYTCGGNEDEKCGGYNALNLYSIE 101
            N  Y  LGCF DN+ DR+LGYK+ D  + T++CY YC    APFMATQ+GIECWCATE  +EY+RHGE  + C Y CGG+ +E CGGY A +LY IE
Sbjct:   74 NRDYTHLGCFVDNRSDRVLGYKLVDEEVDTELCYDYCLEQNAPFMATQWGIECWCATEPDLEYERHGEAEELCDYKCGGDNNEICGGYLAFDLYEIE 170          
BLAST of mRNA_P-littoralis_Contig210.53.1 vs. uniprot
Match: B7G9L2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G9L2_PHATC)

HSP 1 Score: 139 bits (349), Expect = 5.580e-34
Identity = 64/118 (54.24%), Postives = 77/118 (65.25%), Query Frame = 0
Query:  145 PDIVKIIDVVGD-DPRGASWADSYSVGGVCYMQSSFDHDIGDVKVETPLGAMTIKALYDLLPDGPSSHERPLYNDIQCGNGPANTAPDEARCPGLVEHGRAGCGQIGPMWDLTVLETY 261
            PDIV ++DVVG   P G SWADSYSV   CY  ++FDH + DV VETP G MT +   +LL  GP    RP+YNDIQCGNGP N A DE  CPG  + G  GCGQIGP W+   + ++
Sbjct:  163 PDIVAVVDVVGGVTPNGRSWADSYSVNDKCYCATTFDHSVADVIVETPRGRMTTRQACELLGPGPGIEGRPVYNDIQCGNGPPNNAGDEHVCPGRTDIGPEGCGQIGPRWNFDAVGSF 280          
BLAST of mRNA_P-littoralis_Contig210.53.1 vs. uniprot
Match: A0A7S1UW11_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UW11_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.040e-32
Identity = 59/115 (51.30%), Postives = 82/115 (71.30%), Query Frame = 0
Query:  148 VKIIDVVGDD-PRGASWADSYSVGGVCYMQSSFDHDIGDVKVETPLGAMTIKALYDLLPDGPS-SHERPLYNDIQCGNGPANTAPDEARCPGLVEHGRAGCGQIGPMWDLTVLET 260
            V +ID+VG++ P G  WADSYSVGG C+  S++DH+IG    +TP G M+++++ + L  GP  + + P+YNDIQCGNGP N+A DE RCPG V+ G+ GCG IGP W+L +  T
Sbjct:    1 VVVIDIVGEENPGGLGWADSYSVGGDCFCISTYDHNIGTFMYDTPSGYMSVQSICEGLGPGPGRTDDTPIYNDIQCGNGPPNSAGDEQRCPGRVDIGKDGCGHIGPKWNLPMPPT 115          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig210.53.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2N3_9PHAE5.320e-9453.13WSC domain-containing protein n=2 Tax=Ectocarpus s... [more]
D8LNN0_ECTSI1.130e-9254.18WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FZB0_ECTSI2.070e-9053.15WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LTU7_ECTSI1.220e-4966.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTU8_ECTSI1.040e-4265.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZU9_9PHAE1.270e-4161.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B7GED4_PHATC2.370e-3758.12Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
D8LRJ2_ECTSI2.250e-3458.76Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
B7G9L2_PHATC5.580e-3454.24Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S1UW11_9STRA2.040e-3251.30Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 6..101
e-value: 8.0E-4
score: 24.2
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 12..91
e-value: 1.5E-13
score: 50.7
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 8..101
score: 9.776907

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig210contigP-littoralis_Contig210:306459..309318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig210.53.1mRNA_P-littoralis_Contig210.53.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig210 306459..309318 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig210.53.1 ID=prot_P-littoralis_Contig210.53.1|Name=mRNA_P-littoralis_Contig210.53.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=263bp
RPFSDNEKYASLGCFKDNKDDRILGYKMSDGHMTTDMCYAYCSGMAAPFM
ATQFGIECWCATEVTVEYKRHGEGADCSYTCGGNEDEKCGGYNALNLYSI
EPVASTKGGVRRGDEVHAQLGYDQTAEYSSSRAVSRGRTEGALVPDIVKI
IDVVGDDPRGASWADSYSVGGVCYMQSSFDHDIGDVKVETPLGAMTIKAL
YDLLPDGPSSHERPLYNDIQCGNGPANTAPDEARCPGLVEHGRAGCGQIG
PMWDLTVLETYD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd