prot_P-littoralis_Contig210.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig210.8.1
Unique Nameprot_P-littoralis_Contig210.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length177
Homology
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BLAST of mRNA_P-littoralis_Contig210.8.1 vs. uniprot
Match: A0A6H5JXZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ5_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.210e-14
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 0 
Query:    1 MLLASKDHPHGCQLCLCDVGGYPSIGIPTDEKDDRGYTVWENYHGVFSHCAGARSRDGKTFKNATVASGDIVG 73
            +L A    P  CQLCL  VGG PS+G+ + EK+ +G   W N H  ++ C GA++ DG+ +KNAT+A+GDIVG
Sbjct:   71 ILSARGSDPPICQLCLTSVGGTPSLGVLSGEKNSQGRDEWLNIHACWTICCGAKTSDGEKYKNATLATGDIVG 143
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BLAST of mRNA_P-littoralis_Contig210.8.1 vs. uniprot
Match: A0A6H5JLP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP4_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.030e-13
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 0 
Query:    8 HPHGCQLCLCDVGGYPSIGIPTDEKDDRGYTVWENYHGVFSHCAGARSRDGKTFKNATVASGDIVG 73
            +P  C+LCL  VGG PS+G+ + EK D+G   W N H V+  CAGA + DG  +KNAT+A+G+IVG
Sbjct:   78 NPVKCELCLTPVGGTPSLGVLSGEKTDQGRGEWLNIHAVWKLCAGATTSDGGKYKNATLATGEIVG 143
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig210.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXZ5_9PHAE1.210e-1447.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLP4_9PHAE2.030e-1351.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig210contigP-littoralis_Contig210:20454..22581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig210.8.1mRNA_P-littoralis_Contig210.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig210 19766..22896 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig210.8.1 ID=prot_P-littoralis_Contig210.8.1|Name=mRNA_P-littoralis_Contig210.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=177bp
MLLASKDHPHGCQLCLCDVGGYPSIGIPTDEKDDRGYTVWENYHGVFSHC
AGARSRDGKTFKNATVASGDIVGVKEAPVLGRKDRRLQGHQHWVHRQDQG
RGARGQGLGGPPPAPRLLQARVEEGYRPPRSAEEGLPGPRHHTREGSGPA
LRCRPGGSQGLLRATPQARSRLLATP*
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