prot_P-littoralis_Contig21.182.18 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig21.182.18
Unique Nameprot_P-littoralis_Contig21.182.18
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1204
Homology
BLAST of mRNA_P-littoralis_Contig21.182.18 vs. uniprot
Match: A0A6H5L3R1_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3R1_9PHAE)

HSP 1 Score: 571 bits (1472), Expect = 6.010e-177
Identity = 485/943 (51.43%), Postives = 546/943 (57.90%), Query Frame = 0
Query:  298 TVMRTRPDYARLFTPEERDVAQRFDRLSEPSKALYVRLFQRKGPWFRADGMLVYDEVGTGTPLWIRRRNAXXXXXXXXXXXXXXXV-------------VDDEGRDQSTASALPPSTPFAPAVAERVTRPPAHRATYVTACPGG----SESAEAESVPTMRESQADSAGAQERGTTETGQGLGGSLQPADPAAMAVTVAAQGEA-AAXXXXXXXXXADSVAFTARELTVLHEEIQSALRELVGAGFLNALPDDVGRTGPGLEVALAAVECCVRLPELKALLKTTGGNKK--PGXXXXXFASXRTVKAT------GRKQKTAVGTGAGAEAAGGGRREIVKEIRRRHAGQQTLWGVKSPLVGEIERLISASVEALGVDIAAAR-SGGGSGXXXXXNGGTGLRGKISRRHWLVSVVGYPQLVFKRALRLMYLTCHTSALSSGRVGAASVRGTGVAGALSSWSPGLSAAFGKTRYASYICDPQARAFQ------------------------RRGDFLRWEAAVELRCALDGAMEDFPRGR---PAACARGR-------------QXXXXXXXXXXXDRRSVNTSTVEVLVLNSDGELDDNEETLVVAKQGENGLEANMNNFGRKNGR--SMAAEEXXXXXXXXXXXXXXXXXGEIRAALSELEDMIAQFAPEAD-EGYTDRVAEAVTTAAXXXXXXXXXXXXX-----AIALVCSRCLRAHLGTPPITLGLPASSRSYEFSGXXXXXXXXXXXXXXXXXXXXXEFMCLLKERCGVSDVLKS--RPIGGVTTPEEVKQ------AGEASVREKQLQQQERERFLVLESLSEPHQNESGGASKQPSL----LPAKGARSEAKLSSEIAADGGATQGVTGSSTTGEEGVETGDGDRFDSKKDNVPEFLLQLEAGWVLASAVWEGVTLLEKLRDYERAVEQLIQLLATR 1153
            TVM  R DYARLFT EERDVAQRF+RLSEPSK LYVRLFQRKGPWFRAD M  YDEVG+GTPLW+RRRN XXXXXXXXXXXXXXX              V  E RD+ST    PP TPFAPAV ER   P A   +     P G    SE  E E V    E   D A   E     TG        P  PA  A TVAA+ EA AAXXXXXXXXX  SVA T RELTVLH EIQS+L+ELV A FL ALPD+VGRTGPGLE ALAAVECC+R PE+K LLK TGG+KK  P        S R  +         R+Q     +G    AA GGRRE+++E+RRR AGQQTLWGVKSPLV EIERLIS SVEALGVD  A R SGGGS        G G+RGK  R HWLV+V G PQLVFKRALRLMYLTC+T ALSSGRVGAASVRG  + G LSSWSPGLSAAFGKTR    I    A   +                        +RGDFLRWEAAVELRCALDGAME+  RGR   PAA A  R              XXXXXXXXXX  R +   S  EVLV++SDGEL++ EE     K+  + L AN+       GR  + AAE+                   IR+A+S+LEDMIAQF  E D EG T R A       XXXXXXXXXX        AI+  CSRCL AH+G+P +TLG   SS S  FS                      +   LL+ RCG+    ++  RP+  +T PEEV Q      AG A   E+  QQQ+ +       L+ P  +ES     +P L    + A G  S    +S+ A         TGS      G E G GD   S  + VPEFLLQLEAGWVLASAVWEGV LLE+ RDYE AVE L QLLATR
Sbjct:    3 TVMYARSDYARLFTAEERDVAQRFERLSEPSKTLYVRLFQRKGPWFRADSMFAYDEVGSGTPLWVRRRNXXXXXXXXXXXXXXXXXXXXXXGDPTPKAHVSCERRDESTTFG-PPRTPFAPAVGERALSPRADNKS-----PPGVLSVSEGLEPEGVTIPAELHRDEAHPPEGVCPSTGSPPQPGTTP--PAEEAATVAAEAEAEAAXXXXXXXXXXXSVALTPRELTVLHGEIQSSLQELVEARFLGALPDNVGRTGPGLEAALAAVECCMRSPEIKTLLKRTGGSKKGTPTRPQAGKESARCHQPARSGSKHSRRQGAGAASGTAPGAARGGRRELLEELRRRLAGQQTLWGVKSPLVKEIERLISVSVEALGVDTTATRCSGGGSSDTGSTVVGAGMRGKKQRCHWLVAVAGGPQLVFKRALRLMYLTCNTGALSSGRVGAASVRGARITGTLSSWSPGLSAAFGKTRTRCRIHHCMALPLKSVLDLPPFTPLPANTTLHPLLSSIKRGDFLRWEAAVELRCALDGAMEEISRGRQAGPAAVAAARVAGGSECEEGXXXXXXXXXXXXXXNGRSAGKRSRPEVLVVDSDGELENVEEPFAFRKEESDSLNANLERIKMDEGRQGAQAAEDEGEEEAEV-----------IRSAVSQLEDMIAQFFSEGDDEGRTGRTAAXXXXXXXXXXXXXXXXDPSNAIAAAISFACSRCLHAHVGSPAVTLGSQVSSPSSGFSAAKNGVRGGMEEDD--------KLSRLLRARCGLDKPPEAWTRPVREIT-PEEVGQKRTSTYAGRA---ERPRQQQQEDGKCAPALLTHP--SESRHHENEPKLRLVSVTAGGVASGGDPTSDFAPVREQVGAATGS------GTEEGKGDVVGSNNE-VPEFLLQLEAGWVLASAVWEGVALLERARDYEGAVELLTQLLATR 905          
BLAST of mRNA_P-littoralis_Contig21.182.18 vs. uniprot
Match: D7FNK2_ECTSI (Fanconi-associated nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK2_ECTSI)

HSP 1 Score: 416 bits (1069), Expect = 9.510e-128
Identity = 316/635 (49.76%), Postives = 373/635 (58.74%), Query Frame = 0
Query:  551 VRLPELKALLKTTGGNKKPGXXXXXFASXRTVKA-----TGRKQKTAVGTGAGAEAAGG----GRREIVKEIRRRHAGQQTLWGVKSPLVGEIERLISASVEALGVDIAAAR-SGGGSGXXXXXNGGTGLRGKISRRHWLVSVVGYPQLVFKRALRLMYLTCHTSALSSGRVGAASVRGTGVAGALSSWSPGLSAAFGKTRYASYICDPQARAFQRRGDFLRWEAAVELRCALDGAMEDFPRGR---PAACARGR--------QXXXXXXXXXXXDRRSVNTSTVEVLVLNSDGELDDNEETLVVAKQGENGLEANMNNFGRKNGRS--MAAEEXXXXXXXXXXXXXXXXXGEIRAALSELEDMIAQFAPEADEGYTDRVAEAVTTAAXXXXXXXXXXXXXAIALVCSRCLRAHLGTPPITLGLPASSRSYEFSGXXXXXXXXXXXXXXXXXXXXXEFMCLLKERCGVSDVLKS--RPIGGVTTPEEVKQAGE--ASVREKQLQQQERERFLVLESLSEP-----HQNESGGASKQPSLLPAKGARSEAKLSSEIAADGGATQGVTGSSTTGEEGVETGDGDRFDSKKDNVPEFLLQLEAGWVLASAVWEGVTLLEKLRDYERAVEQLIQLLATR 1153
            +R PE+K LLK TGG+KK G      A   + +      +G K+    G GA A AA G    GRRE+++E+RRR AGQQTLWGVKSPLV EIERLISASVEALGVD    R SGGGS        G G+RGK  R HWLV+V G PQLVFKRALRLMYLTC+T ALSSGRVGAASVRG G+ GALSSWSPGLSAAFGKTRYASY+C+PQARAFQ+R DFLRWEAAVELRCALD AME+  RGR   PAA A  R        + XXXXXXXXX    +   S  EVLVL+SDGEL++ EE+    ++    L A +    +K GR    AAE+                   IR A+SELEDMIAQF       +++  + AV  A               I+  CSRCL AHLG+P +TLG   SS S  FSG                     + + LL+ RCG++   ++  RP+  +T PEEV Q G   A   E+  QQQ+ +       L+ P     H+NES    K  S+  A G  S    +S+ A  G      TGS      G E G GD   S  + VPEFLLQLEAGWVLASAVWEGV LLE+ RDYE AVE L QLLATR
Sbjct:    1 MRSPEIKTLLKRTGGSKK-GTPTRPQAGKESARGFQPARSGSKESRRQGPGAAARAAPGAARGGRREMLEELRRRLAGQQTLWGVKSPLVKEIERLISASVEALGVDTIGTRCSGGGSSDTGSAVVGAGMRGKKQRCHWLVTVAGGPQLVFKRALRLMYLTCNTGALSSGRVGAASVRGAGITGALSSWSPGLSAAFGKTRYASYVCNPQARAFQQRDDFLRWEAAVELRCALDRAMEEISRGRQAGPAALATARVADGAESEEGXXXXXXXXXNGSSAGKRSWPEVLVLDSDGELENVEESFAFRREESGSLNAKLERIKKKEGRQGVQAAEDEGEEEAEM-----------IRPAVSELEDMIAQF-------FSEDPSNAVAVA---------------ISFACSRCLHAHLGSPAVTLGSQVSSSSSGFSGAKNGVGGGVEEDD--------KLLRLLRARCGLNKAPEAWTRPVREIT-PEEVGQKGTDYAGRAERPRQQQQEDGKCGPALLTHPSELRHHENES--ELKLVSVT-AGGVASGGDPTSDFAPVGEQMGAATGS------GTEEGKGDVVGSNNE-VPEFLLQLEAGWVLASAVWEGVALLERARDYENAVELLTQLLATR 582          
BLAST of mRNA_P-littoralis_Contig21.182.18 vs. uniprot
Match: UPI00053C4DAF (fanconi-associated nuclease 1 homolog isoform X2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C4DAF)

HSP 1 Score: 58.9 bits (141), Expect = 5.540e-5
Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 0
Query:  271 VDEDGEQEERRPPPRSTYLRHFEDALQTVMRTRPDYARLFTPEERDVAQRFDRLSEPSKALYVRLFQRKGPWFRADGMLVYDEV 354
            V ++ E +++ PP    Y  +F   +Q V+R+   Y+ LFTP E+ + + F  LSE S+ L+VRL+ RKGPWFR    + Y EV
Sbjct:  315 VLQNAEYQKKFPPKMQRYQHNFNILIQEVLRS---YSHLFTPCEKALLESFPSLSEDSQRLFVRLYMRKGPWFRQSN-ISYPEV 394          
BLAST of mRNA_P-littoralis_Contig21.182.18 vs. uniprot
Match: UPI00053C1178 (fanconi-associated nuclease 1 homolog isoform X1 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C1178)

HSP 1 Score: 58.9 bits (141), Expect = 6.740e-5
Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 0
Query:  271 VDEDGEQEERRPPPRSTYLRHFEDALQTVMRTRPDYARLFTPEERDVAQRFDRLSEPSKALYVRLFQRKGPWFRADGMLVYDEV 354
            V ++ E +++ PP    Y  +F   +Q V+R+   Y+ LFTP E+ + + F  LSE S+ L+VRL+ RKGPWFR    + Y EV
Sbjct:  315 VLQNAEYQKKFPPKMQRYQHNFNILIQEVLRS---YSHLFTPCEKALLESFPSLSEDSQRLFVRLYMRKGPWFRQSN-ISYPEV 394          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig21.182.18 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L3R1_9PHAE6.010e-17751.43Fanconi-associated nuclease n=1 Tax=Ectocarpus sp.... [more]
D7FNK2_ECTSI9.510e-12849.76Fanconi-associated nuclease n=1 Tax=Ectocarpus sil... [more]
UPI00053C4DAF5.540e-540.48fanconi-associated nuclease 1 homolog isoform X2 n... [more]
UPI00053C11786.740e-540.48fanconi-associated nuclease 1 homolog isoform X1 n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 792..812
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1032..1102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 861..875
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 847..878
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 436..463
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 565..598
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 784..810
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..285
NoneNo IPR availablePANTHERPTHR15749:SF4FANCONI-ASSOCIATED NUCLEASE 1coord: 96..1154
IPR033315Fanconi-associated nuclease 1-likePANTHERPTHR15749FANCONI-ASSOCIATED NUCLEASE 1coord: 96..1154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig21contigP-littoralis_Contig21:678213..682805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig21.182.18mRNA_P-littoralis_Contig21.182.18Pylaiella littoralis U1_48mRNAP-littoralis_Contig21 673178..682961 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig21.182.18 ID=prot_P-littoralis_Contig21.182.18|Name=mRNA_P-littoralis_Contig21.182.18|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1204bp
MKRSRLSLPGTKKNDPKQLRRQAREKQQPRSGSGTGEKIKDHRSISPSPR
EIFPTPPRRKRNTAASPHGSSTAPVRAGTTGNEEPARNSAPQQSNQHQLP
SSPWAHLSSSSSSRKRPRPFPFSPPSPSPSPRQQRQLQRDSPVIDLTAET
CDLQNRTNSRHRQGQARHTMGVARPRSLSPSPSSTTPRTTTATTTPPRGL
SPELAAGSSNHHRRGALSAEEIPPPMPLTGALPSPPRATTPCVATTAVRS
PPAPSIPMPLSRAAPAPAPAVDEDGEQEERRPPPRSTYLRHFEDALQTVM
RTRPDYARLFTPEERDVAQRFDRLSEPSKALYVRLFQRKGPWFRADGMLV
YDEVGTGTPLWIRRRNAAATADAAAAAAAASFVVDDEGRDQSTASALPPS
TPFAPAVAERVTRPPAHRATYVTACPGGSESAEAESVPTMRESQADSAGA
QERGTTETGQGLGGSLQPADPAAMAVTVAAQGEAAAEAAAIAAAAADSVA
FTARELTVLHEEIQSALRELVGAGFLNALPDDVGRTGPGLEVALAAVECC
VRLPELKALLKTTGGNKKPGGGRKSFASGRTVKATGRKQKTAVGTGAGAE
AAGGGRREIVKEIRRRHAGQQTLWGVKSPLVGEIERLISASVEALGVDIA
AARSGGGSGGGSGANGGTGLRGKISRRHWLVSVVGYPQLVFKRALRLMYL
TCHTSALSSGRVGAASVRGTGVAGALSSWSPGLSAAFGKTRYASYICDPQ
ARAFQRRGDFLRWEAAVELRCALDGAMEDFPRGRPAACARGRQQEEEEED
EVEEDRRSVNTSTVEVLVLNSDGELDDNEETLVVAKQGENGLEANMNNFG
RKNGRSMAAEEEEGEGEEEEEEEEERGRGEIRAALSELEDMIAQFAPEAD
EGYTDRVAEAVTTAATAATTNASAAAAVAIALVCSRCLRAHLGTPPITLG
LPASSRSYEFSGGGAAARVVGGRQREDEEREDEEFMCLLKERCGVSDVLK
SRPIGGVTTPEEVKQAGEASVREKQLQQQERERFLVLESLSEPHQNESGG
ASKQPSLLPAKGARSEAKLSSEIAADGGATQGVTGSSTTGEEGVETGDGD
RFDSKKDNVPEFLLQLEAGWVLASAVWEGVTLLEKLRDYERAVEQLIQLL
ATRQVMVPVIRRLPSDTTVRLWQHESGDARSFSCQHRLVLAFLRAKGFSH
PSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033315Fan1-like