prot_P-littoralis_Contig21.148.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig21.148.1
Unique Nameprot_P-littoralis_Contig21.148.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length806
Homology
BLAST of mRNA_P-littoralis_Contig21.148.1 vs. uniprot
Match: D7FNP3_ECTSI (Poly(A) binding protein, cytoplasmic 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP3_ECTSI)

HSP 1 Score: 541 bits (1393), Expect = 3.090e-180
Identity = 316/426 (74.18%), Postives = 341/426 (80.05%), Query Frame = 0
Query:  129 QSAGEEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLCVGGLEGGAITTEMLVREFARFGPLDKELTSIKPGATVGFVKYRYRLHAETAKKDLHERPAFGGLCPSVQIEWNSVESSAQDSETAESESTTRDRPSTGGGA--------KRVGGKGGKPXXXXXXXXXXXHPRQ-RGEISSNIVHVQFEGEQARVSAVNEVMIRKCFTKFEPVVEIVIPASRFNGVSPGPRQLPRCWGLVHFPPTPEGERAAAGAIKSLNGTTISELKVHCTMSR--TSGSGSSWPKQGGAXXXXXXXXXXXXXXXXXX---------QGFGGRPARSSLEGPGAPEGRPGGWGGNVGTYRHNMQVQQNRP 534
            +S GEEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFE HGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSL VGGLEGGAITTEMLVREFARFGPLDKELT+IKPGA  GFVKYRYRLHAE AKK+L+ERPAF GLCPS++IEWNSVESSAQ SETA SE +T                  +         XXXXXXXXXX H R  RGE+SS+ VHVQFEG+Q  VSAVNEVMIRKCFTK+EPVV+IVIPASRFNGVSPGPRQLPRCW  VHFPPTP+GERAAA AIK LNGTTISEL+VHCTMSR  ++ +GS W KQG  XXXX        XXXXX          QGFGGRP+RSSL+ PGA +GR GGWGG +    + +  QQ+ P
Sbjct:  184 ESVGEEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEQHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAXXXXXXXXXXXXXXXXKEXXXXXXXXXXXXXXXXXXXAHSRHPRGEVSSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAADAIKGLNGTTISELRVHCTMSRGGSTRAGSPWRKQGXXXXXXNRARRHSTXXXXXDRAMGHAXXXQGFGGRPSRSSLDHPGAQQGRSGGWGGQM----YQLPQQQHMP 605          
BLAST of mRNA_P-littoralis_Contig21.148.1 vs. uniprot
Match: A0A6H5L4J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J2_9PHAE)

HSP 1 Score: 532 bits (1370), Expect = 3.910e-175
Identity = 332/453 (73.29%), Postives = 348/453 (76.82%), Query Frame = 0
Query:  130 SAGEEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLCVGGLEGGAITTEMLVREFARFGPLDKELTSIKPGATVGFVKYRYRLHAETAKKDLHERPAFGGLCPSVQIEWNSVESSAQDSETAESE-STTRDRPSTGGGAKRVGGKGGKPXXXXXXXXXXX---------HPRQ-RGEISSNIVHVQFEGEQARVSAVNEVMIRKCFTKFEPVVEIVIPASRFNGVSPGPRQLPRCWGLVHFPPTPEGERAAAGAIKSLNGTTISELKVHCTMSRTSGS--GSSWPKQGGAXXXXXXXXXXXXXXXXXXQGFG---------GRPARSSLEGPGAPEGRPGGWGGNVGTYRHNMQ-----VQQNRPFLFPGSGGQHTPF---PHMQH 552
            S GEEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFE HGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSL VGGLEGGAITTEMLVREFARFGPLDKELT+IKPGA  GFVKYRYRLHAE AKK+L+ERPAF GLCPS++IEWNSVESSAQ SETA SE ST  DR  T            K XXXXXXXXXXX         H R  RGE+SS+ VHVQFEG+Q  VSAVNEVMIRKCFTK+EPVV+IVIPASRFNGVSPGPRQLPRCW  VHFPPTP+GERAAA AIK LNGTTISEL+VHCTMSR  G+  GS W KQG  XXXXXXXXXXXXXXXXX +                           GR GGWGG+ G  RHNMQ      QQ       G+GG H P    PHMQH
Sbjct:   48 SVGEEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEQHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLYVGGLEGGAITTEMLVREFARFGPLDKELTTIKPGAKFGFVKYRYRLHAEAAKKELNERPAFDGLCPSLEIEWNSVESSAQASETAGSEKSTAEDR--TXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXAHSRHPRGEVSSHTVHVQFEGDQGHVSAVNEVMIRKCFTKWEPVVDIVIPASRFNGVSPGPRQLPRCWAFVHFPPTPDGERAAANAIKDLNGTTISELRVHCTMSRGGGTSAGSPWSKQGXXXXXXXXXXXXXXXXXXXDRAMSHAXXXXXXXXXXXXXXXXXXXXXXGRSGGWGGHAGMNRHNMQRMHHQQQQGSHLAHGGAGGHHLPGAFPPHMQH 498          
BLAST of mRNA_P-littoralis_Contig21.148.1 vs. uniprot
Match: A0A7S2RB19_9STRA (Hypothetical protein n=4 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB19_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.030e-34
Identity = 83/175 (47.43%), Postives = 115/175 (65.71%), Query Frame = 0
Query:  144 PGTPEECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLCVGGLEGGAITTEMLVREFARFGPLDKELTSIKP-----------GATV--GFVKYRYRLHAETAKKDLHERPAFGGLCPSVQIEW 305
            P   ++ NLFVGDLAR++TEE+L+ AFEPHGRV+ V +KRDR T +NLGYGFV++ SH EA  AKE+M G E+ GRRVRVGWA KN++L V  L+ G ++ E L+  FARFGPLD + + ++P           G+T      K+  R HAE+AK++L          P ++++W
Sbjct:   47 PTPGDDNNLFVGDLARDITEEELKDAFEPHGRVVEVLVKRDRLTHRNLGYGFVRMGSHAEACLAKESMHGREVAGRRVRVGWAMKNSTLVVKDLDPG-LSEEDLLNAFARFGPLDLDQSGVRPAEPCSEEEEAGGSTALQAVFKFTQRTHAESAKQNLSGMMLASSSAP-LRVDW 219          
BLAST of mRNA_P-littoralis_Contig21.148.1 vs. uniprot
Match: W7TSQ6_9STRA (Tia1 cytotoxic granule-associated rna binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSQ6_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.520e-33
Identity = 104/323 (32.20%), Postives = 164/323 (50.77%), Query Frame = 0
Query:  148 EECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLCVGGLEGGAITTEMLVREFARFGPLDKELTSIKPG--ATVGFVKYRYRLHAETAKKDLHERPAFGGLCPSVQIEWNSVESSAQDSETAESESTTRDRPSTGGGAKRVGGKGGKPXXXXXXXXXXXHPRQRGEISSN---IVHVQFEGEQARVSAVNEVMIRKCFTKFEPVVEIVIPASRFNGVSPGPRQLPRC---WGLVHFPPTPEGERAAAGAIKSLNGTTISELKVHCTMSRTSG 462
            ++C LF+GDLAR LTE ++ +AF   G V  V IKRD+ T +NLGYGFV++SSH++A  AKE MQG ++ GRR+R+GWAQ+NT+L +G L+      E L R F  FG L    + ++ G     G VK+  R  AETA++++H R    G  P +++ W+  ++  + +        +   PS    ++ +                   P   G + S+    VHV FE +    + V E +I   F  F  ++ +++P       S     +  C   +G VHF  +  G   A  AI++L G  ++ +++ C  SR  G
Sbjct:  103 DDCILFIGDLARGLTEREVAQAFAAVGNVEMVDIKRDKVTMRNLGYGFVQMSSHEQAAVAKERMQGADIQGRRIRIGWAQRNTTLFIGDLDEST-NVEDLHRTFGPFGLLYTNDSYLRQGKCGKYGSVKFMSRKDAETARREMHGRVLRDGTRP-IRVVWHHPQTITKKT------GLSVPLPSNEQHSREL--------------VHIPPPPPAGVLVSSRPYSVHVHFEADGME-NLVTENLIYGLFAPFGQIIAVILPQGPGILCSDQNEDVSCCRRGYGFVHFTGSALGRLCAIEAIRTLQGEIVAGIRLQCAFSRKPG 402          
BLAST of mRNA_P-littoralis_Contig21.148.1 vs. uniprot
Match: A0A7S0DL40_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DL40_9EUKA)

HSP 1 Score: 143 bits (360), Expect = 7.870e-33
Identity = 96/312 (30.77%), Postives = 149/312 (47.76%), Query Frame = 0
Query:  152 LFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLCVGGLEGGAITTEMLVREFARFGPLDKELTSIKPGATVGFVKYRYRLHAETAKKDLHERPAFGGLCPSVQIEWNSVESSAQDSETAESESTTRDRPSTGGGAKRVGGKGGKPXXXXXXXXXXXHPRQRGEISSNIVHVQF----EGEQARVSAVNEVMIRKCFTKFEPVVEIVIPASRFNGVSPGPRQLPRCWGLVHFPPTPEGERAAAGAIKSLNGTTISELKVHCTMSR 459
            +FVGDL+R + ++ L    E HG V++V IKRDR T  NLGYGFV+  +H++A  AK+A+ GVE+ GR++R GWAQ+NT+L VG L+   I   +    F+R+G L  + T  K     G VK++ R +AETAK +L+ +       P V++ W                                                         +  + VHV+F    E +  + S ++E +++K F ++  V+ + +P    N +        + +G VHF  T +GE +A  AI +L+GT I  L V C   R
Sbjct:   77 IFVGDLSRTVKDKDLRAVMELHGSVVNVDIKRDRVTNNNLGYGFVQFETHEQALKAKKALHGVEVSGRKIRTGWAQRNTTLFVGDLDN-TIDATVYRTAFSRYGNLVDDETYFKVDKGFGMVKFKTRENAETAKVELNGKRIGQSKRP-VRVIWGDT-----------------------------------------------------SVQKHCVHVKFDVGKEVKSIQESEISEDVLQKVFQEYGQVLTVNLPRHSDNTL--------KGYGFVHFEDTEKGEESAKKAIANLSGTKIGRLVVQCNYGR 325          
BLAST of mRNA_P-littoralis_Contig21.148.1 vs. uniprot
Match: A0A7S3Z8S4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z8S4_9EUKA)

HSP 1 Score: 142 bits (358), Expect = 2.590e-32
Identity = 105/340 (30.88%), Postives = 161/340 (47.35%), Query Frame = 0
Query:  124 KVEGEQSAGEEASTNSLKDDPGTPEECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLCVGGLEGGAITTEMLVREFARFGPLDKELTSIKPGATVGFVKYRYRLHAETAKKDLHERPAFGGLCPSVQIEWNSVESSAQDSETAESESTTRDRPSTGGGAKRVGGKGGKPXXXXXXXXXXXHPRQRGEISSNIVHVQFE-GEQARV---SAVNEVMIRKCFTKFEPVVEIVIPASRFNGVSPGPRQLPRCWGLVHFPPTPEGERAAAGAIKSLNGTTISELKVHCTMSR 459
            K+E     G E  T + KD  G   +  +FVGDL+R + ++ L    E HG V++V IKRD+ T  NLGYGFV+  +H+EA  AK+A+ GV + GR++R GWAQ+NT+L VG L+     +E     FAR+G L  + T  K     G VKY+ R +AETAK +L+ +       P V++ W                                                         +  + VHV+F+ G++ +    S ++E  ++K F+++  V  + +P  R N       Q  + +G VHF  + +GE +A  AI +L+GT I  L + C   R
Sbjct:   85 KLESNDRNGSEGKTTNEKDKQG---DTIIFVGDLSRTVRDKDLRTVMEQHGTVVNVDIKRDKVTHNNLGYGFVQFETHEEAVKAKKALHGVVVSGRKIRTGWAQRNTTLFVGDLDSFVDESEYRAA-FARYGSLVLDETYFKVDKGFGMVKYKTRENAETAKMELNGKKIGKSKRP-VRVIWGDT-----------------------------------------------------SVQKHCVHVKFDVGKEVKTIQDSDISEDDLQKVFSEYGQVQSVNLP--RHND------QSLKGYGFVHFEDSEKGEESAKKAIANLSGTKIGRLVIQCNYGR 358          
BLAST of mRNA_P-littoralis_Contig21.148.1 vs. uniprot
Match: A0A7S0TF52_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Elphidium margaritaceum TaxID=933848 RepID=A0A7S0TF52_9EUKA)

HSP 1 Score: 137 bits (344), Expect = 5.280e-32
Identity = 105/323 (32.51%), Postives = 147/323 (45.51%), Query Frame = 0
Query:  147 PEECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSL--CVGGLEGGAITTEMLVREFARFGPLDKELTSIKPGATVGFVKYRYRLHAETAK-----KDLHERPAFGGLCPSVQIEWNSVESSAQDSETAESESTTRDRPSTGGGAKRVGGKGGKPXXXXXXXXXXXHPRQRGEISSNIVHVQFEGEQARVSAVNEVMIRKCFTKFEPVVEIVIPA---SRFNGVSPGPRQLPRCWGLVHFPPTPEGERAAAGAIKSLNGTTISELKVHCTMSR 459
            P+E +LF+GDL+R++ E+ L K FE  G V  V IKRD+ T  NLGYGFVK  +   A  AK  + G+E+ GR +R+GWAQKNT+L  C+ G     IT E L   F+ FGP+ +E T +K     GFVK+++RLHAE AK     K L  +  +  + P V+I W    +                                                QR     N VHVQFE   A    + E   ++ F +F  V ++ +P     R  G           +G +HF    EGE +AA AI  L  + I  + + C   +
Sbjct:    2 PDESSLFIGDLSRSVNEDMLRKLFEQLGEV-EVDIKRDKVTKNNLGYGFVKFRNRCHAEQAKRKLNGLEIAGRAIRIGWAQKNTNLFVCLVGDVERHITGEHLREIFSEFGPIYEEDTFVKRNK-YGFVKFKHRLHAEKAKAALDGKHLLTKNGYKTMKP-VRIGWGDANT------------------------------------------------QR-----NCVHVQFEQNSASSVDLKEEDFKQQFQRFGVVNKVSLPRYSDKRLKG-----------YGFIHFEENDEGEESAARAITELTASPIKGVVIMCNFGK 257          
BLAST of mRNA_P-littoralis_Contig21.148.1 vs. uniprot
Match: L8H825_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H825_ACACA)

HSP 1 Score: 136 bits (343), Expect = 7.000e-31
Identity = 73/144 (50.69%), Postives = 103/144 (71.53%), Query Frame = 0
Query:  148 EECNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLCVGGLEGGAITTEMLVREFARFGPLDKELTSIKPGATVGFVKYRYRLHAETAKKDLHER 291
            E C LF+GDLAR L E++L +AF+P G V+SV IKRDR T  +LGYGFV L S ++A AAK+AM    +GGR +R+GWAQKNT+L +G L+  +IT+  L   F +FGP+ +E T +K     GFV++R+R HAE AK++++ +
Sbjct:   62 ERC-LFIGDLARGLNEDQLREAFDPFG-VISVEIKRDRVTNYSLGYGFVLLKSREDAGAAKKAMHRQVVGGRAIRIGWAQKNTNLFIGDLDP-SITSAQLREVFRQFGPIYEEETFVK-NRNYGFVRFRHRKHAEMAKREMNNK 201          
BLAST of mRNA_P-littoralis_Contig21.148.1 vs. uniprot
Match: A0A7S3DFR0_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DFR0_9EUKA)

HSP 1 Score: 135 bits (340), Expect = 3.330e-30
Identity = 75/184 (40.76%), Postives = 114/184 (61.96%), Query Frame = 0
Query:  152 LFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLCVGGLEGGAITTEMLVREFARFGPLDKELTSIKPGATVGFVKYRYRLHAETAKKDLHERPAFGGLCPSVQIEWNSVES---------SAQDSETAESESTTRD 326
            LFVGDL+R++  E L+  F   G V+++ IKRDR T  +LGYGFV+    ++A  AK+ + G  +G R +R+GWAQKNT+L +G L+  ++T+E+L  EF +FGPL +E T +K G + GFV++R R  AETAK+++  +   G +   ++I W   +S             S+ A SE+T RD
Sbjct:   28 LFVGDLSRDIDVETLKDHFLQFGEVINIDIKRDRMTSNSLGYGFVEFQRFEDALEAKKQLSGARIGERAIRLGWAQKNTNLFIGDLDA-SVTSEILFNEFKQFGPLFEEDTFVKEGMSYGFVRFRKREDAETAKREMQGKNFHGRV---IRIGWGDAKSIDNCVHFRFDTSQSKAAISEATVRD 207          
BLAST of mRNA_P-littoralis_Contig21.148.1 vs. uniprot
Match: A0A7S1TRI4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRI4_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.730e-26
Identity = 70/169 (41.42%), Postives = 101/169 (59.76%), Query Frame = 0
Query:  150 CNLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSSHQEARAAKEAMQGVELGGRRVRVGWAQKNTSLCVGGLEGGAITTEMLVREFARFGPLDKELTSIKP---------GATVG---FVKYRYRLHAETAKKDLHERPAFGGLCPSVQIEWN 306
            C+LFVGDL R  TEE L++AF P+G ++   +KRD+ +G+NLGYGF+KL + + A  A   M G+ L GRR+RV +AQKN  L V  L   A T + L+  FA  GPLD E   ++P         GA +G    +K+RYR HAE A+  ++ R    G    ++++W+
Sbjct:   76 CHLFVGDLHRTTTEEDLQEAFRPYGNIVFSEVKRDKVSGRNLGYGFLKLDTEEGAERALREMNGMALKGRRIRVNYAQKNCELHVTNLSEDA-TRDELLPIFAALGPLDLEHCVLRPPEATYPGAAGAKLGASAIIKFRYRQHAENARDTVNNRATLHGA--PLRVDWH 241          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig21.148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNP3_ECTSI3.090e-18074.18Poly(A) binding protein, cytoplasmic 4-like n=1 Ta... [more]
A0A6H5L4J2_9PHAE3.910e-17573.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RB19_9STRA1.030e-3447.43Hypothetical protein n=4 Tax=Rhizochromulina marin... [more]
W7TSQ6_9STRA3.520e-3332.20Tia1 cytotoxic granule-associated rna binding prot... [more]
A0A7S0DL40_9EUKA7.870e-3330.77Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S3Z8S4_9EUKA2.590e-3230.88Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S0TF52_9EUKA5.280e-3232.51Hypothetical protein (Fragment) n=1 Tax=Elphidium ... [more]
L8H825_ACACA7.000e-3150.69RNA recognition motif domain containing protein n=... [more]
A0A7S3DFR0_9EUKA3.330e-3040.76Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7S1TRI4_9STRA1.730e-2641.42Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..128
NoneNo IPR availableCOILSCoilCoilcoord: 571..601
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 523..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 570..604
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 689..762
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..762
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..613
NoneNo IPR availablePANTHERPTHR48025OS02G0815200 PROTEINcoord: 101..230
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 231..302
e-value: 0.6
score: 8.6
coord: 151..224
e-value: 4.4E-25
score: 99.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 152..222
e-value: 2.2E-18
score: 65.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 150..228
score: 18.615002
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 380..527
e-value: 4.4E-9
score: 38.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 231..330
e-value: 4.7E-5
score: 25.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 99..230
e-value: 4.6E-30
score: 106.6
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 147..292
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 382..491

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig21contigP-littoralis_Contig21:555793..563714 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig21.148.1mRNA_P-littoralis_Contig21.148.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig21 554592..563725 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig21.148.1 ID=prot_P-littoralis_Contig21.148.1|Name=mRNA_P-littoralis_Contig21.148.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=806bp
MAPPTESGTSPAAAAAAAAATTTPAATALETPAGTAVAGADTTATVVAPS
PPTEADTPATISPPPAAAAVGESDSGTSAPKEGALAGGIADLKDALPAAA
AAAVTSEGAEKEETVAEAESESKKVEGEQSAGEEASTNSLKDDPGTPEEC
NLFVGDLARNLTEEKLEKAFEPHGRVMSVSIKRDRATGKNLGYGFVKLSS
HQEARAAKEAMQGVELGGRRVRVGWAQKNTSLCVGGLEGGAITTEMLVRE
FARFGPLDKELTSIKPGATVGFVKYRYRLHAETAKKDLHERPAFGGLCPS
VQIEWNSVESSAQDSETAESESTTRDRPSTGGGAKRVGGKGGKPSNQSGG
GGGGGHPRQRGEISSNIVHVQFEGEQARVSAVNEVMIRKCFTKFEPVVEI
VIPASRFNGVSPGPRQLPRCWGLVHFPPTPEGERAAAGAIKSLNGTTISE
LKVHCTMSRTSGSGSSWPKQGGAGGGGGTRSRRHSTGGGGGQGFGGRPAR
SSLEGPGAPEGRPGGWGGNVGTYRHNMQVQQNRPFLFPGSGGQHTPFPHM
QHHPQPHLLHQAHHPLHPQHVGQLQQQQQAAQQQQQQQQQQQQQQQQQQH
QPGAATAAAAAAAGSGGSGSDGAVGGGGGGGGGAGVAGGGGSGSSDMMVQ
TPYAINPYQYAMPYQGVTYAPAQQGYPMGYPQMFQGYPYPAMPQGQQQQQ
QHGAIPQNNPQQTGAQTVPQGGGAPANQQQARAAQRQPQRQQQQHMGLQQ
MVMGGQGQPSYMPAHQMFQLSQPAMSGGELQQGAAAVVVDPTAAGSADGK
KIGGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf