mRNA_P-littoralis_Contig21.130.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig21.130.1 vs. uniprot
Match: A0A6H5KLE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE4_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.270e-50 Identity = 84/141 (59.57%), Postives = 100/141 (70.92%), Query Frame = 1
Query: 4 RWKE--VEADKPVSGEEMVVVRKVKRIYNVRTRSASCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARVTGTQWHQSDSTAAFKLWEELGTVEQPTLISRFGRWAGF 420
RWK E PVSGEE V RKVKR Y +RTR ASCFCSACQ +Y+ C+V + YP LV A++ GEVKETVIMDTG APVD I FG R+K C+M R+TGT W + +S AA K+WEELG E+P + +RFGRWAGF
Sbjct: 122 RWKGKGAELHHPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQKGEVKETVIMDTGVAPVDEDNSRGIQFGSRRKECKMKRITGTHWQECESAAASKIWEELGRKEEPNIFARFGRWAGF 262
BLAST of mRNA_P-littoralis_Contig21.130.1 vs. uniprot
Match: A0A6H5JDR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR7_9PHAE) HSP 1 Score: 166 bits (420), Expect = 2.400e-48 Identity = 82/141 (58.16%), Postives = 100/141 (70.92%), Query Frame = 1
Query: 4 RWKEVEA--DKPVSGEEMVVVRKVKRIYNVRTRSASCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARVTGTQWHQSDSTAAFKLWEELGTVEQPTLISRFGRWAGF 420
RWK A PVSGEE V RKVKR Y +R+R ASCFCSACQ +Y+ C V + YP LV A++ GEVKETVIMDTG APVD I FG R+K C+M R+T T+W + +S AA K+WEELG E+P +++RFGRWAGF
Sbjct: 99 RWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRSRLASCFCSACQRCEYEQCDVSKTYPRLVPALQEGEVKETVIMDTGVAPVDEDNSRGIQFGSRRKECKMKRITETRWQEYESAAASKIWEELGRKEEPHIVARFGRWAGF 239
BLAST of mRNA_P-littoralis_Contig21.130.1 vs. uniprot
Match: A0A6H5JLE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE6_9PHAE) HSP 1 Score: 171 bits (432), Expect = 1.270e-47 Identity = 81/129 (62.79%), Postives = 97/129 (75.19%), Query Frame = 1
Query: 34 VSGEEMVVVRKVKRIYNVRTRSASCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARVTGTQWHQSDSTAAFKLWEELGTVEQPTLISRFGRWAGF 420
VSGEE V RKVKR Y +RTR ASCFCSACQ +Y+ C+V++ YP LV A++ GEVKETVIMDTG APVD I FG RKK C+M R+TGTQW + +S AA K+WEELG E+P + +RFGRWAGF
Sbjct: 354 VSGEEGVTCRKVKRTYRLRTRLASCFCSACQRFEYEQCYVNKKYPRLVPALQEGEVKETVIMDTGVAPVDEDNSRGIQFGSRKKECKMKRITGTQWQECESAAASKIWEELGGKEEPNIFARFGRWAGF 482
BLAST of mRNA_P-littoralis_Contig21.130.1 vs. uniprot
Match: A0A6H5JA27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA27_9PHAE) HSP 1 Score: 160 bits (406), Expect = 4.210e-45 Identity = 80/141 (56.74%), Postives = 97/141 (68.79%), Query Frame = 1
Query: 4 RWKEVEA--DKPVSGEEMVVVRKVKRIYNVRTRSASCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARVTGTQWHQSDSTAAFKLWEELGTVEQPTLISRFGRWAGF 420
RWK A PV GEE V RKVKR Y +RTR ASCFCSACQ +Y+ C+V + YP LV A++ GEVKETVI DTG AP+D I FG R+K C+M R+TGTQ + +S AA K+WEE G E+P + +RFGRWAGF
Sbjct: 198 RWKGKGAGLQDPVPGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQEGEVKETVITDTGVAPLDEDNSRGIQFGSRRKECKMKRITGTQLQECESAAASKIWEERGRKEEPNIFARFGRWAGF 338
BLAST of mRNA_P-littoralis_Contig21.130.1 vs. uniprot
Match: A0A6H5JQK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQK2_9PHAE) HSP 1 Score: 152 bits (385), Expect = 1.020e-39 Identity = 79/141 (56.03%), Postives = 95/141 (67.38%), Query Frame = 1
Query: 4 RWKEVEA--DKPVSGEEMVVVRKVKRIYNVRTRSASCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARVTGTQWHQSDS-TAAFKLWEELGTVEQPTLISRFGRWAG 417
RWK A P+SGEE V +KVKR Y++RTR ASCFCSAC+ S+Y+ +V + YP LV AM +G VKETVIMDTG APVD + F KK C R+TGTQW DS T A K+WEELG E+P + +RFGRWAG
Sbjct: 580 RWKGQGAGLQDPISGEEDVTCKKVKRTYSLRTRLASCFCSACRRSEYEQYYVSKTYPRLVPAMEDGVVKETVIMDTGVAPVDENSSEGMKFPRYKKYCTKKRITGTQWLDGDSATTASKIWEELGRKEEPNIFARFGRWAG 720
BLAST of mRNA_P-littoralis_Contig21.130.1 vs. uniprot
Match: A0A6H5JQK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQK7_9PHAE) HSP 1 Score: 147 bits (370), Expect = 3.550e-39 Identity = 76/155 (49.03%), Postives = 94/155 (60.65%), Query Frame = 1
Query: 4 RWKEVEA--DKPVSGEEMVVVRKVKRIYNVRTRSASCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARVTGTQWHQSDSTAAFKLWEELGTVEQPTLISRFGRWAGF*VWSVSRVFVQELW 462
RWK A P+SGEE + RKVKR ++RTR ASCFCS C+ S+Y+ C+V + +P LV M +G VKETVIM TG APVD I F KK C+ R TGTQW S A K+WEELG E+P+ S FGRWA V + V++ W
Sbjct: 242 RWKGEGAKLQDPISGEEDMTCRKVKRTCSLRTRLASCFCSVCRRSEYEQCYVSKTFPRLVPVMEDGVVKETVIMGTGVAPVDEDASEGIKFPRYKKECKKKRTTGTQWQDGGSATASKIWEELGRKEEPSTFSSFGRWADIYVTCFLYLLVEQCW 396
BLAST of mRNA_P-littoralis_Contig21.130.1 vs. uniprot
Match: A0A6H5JBS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS1_9PHAE) HSP 1 Score: 132 bits (332), Expect = 1.170e-33 Identity = 68/116 (58.62%), Postives = 80/116 (68.97%), Query Frame = 1
Query: 4 RWKEVEA--DKPVSGEEMVVVRKVKRIYNVRTRSASCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARVTGTQWHQSDSTAA 345
RWK A PVSGEE V RKVKR Y +RTR ASCFCSACQ +Y+ C+V + YP LV A++ GEVKETVIMDTG APVD I FG R+K C+M +TGTQW + +S AA
Sbjct: 279 RWKGKGAGLQDPVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEYEQCYVSKTYPRLVPALQQGEVKETVIMDTGGAPVDEDNSRGIQFGSRRKECKMKIITGTQWQECESAAA 394
BLAST of mRNA_P-littoralis_Contig21.130.1 vs. uniprot
Match: A0A6H5KTJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ4_9PHAE) HSP 1 Score: 134 bits (338), Expect = 1.560e-33 Identity = 69/124 (55.65%), Postives = 82/124 (66.13%), Query Frame = 1
Query: 4 RWKEVEA--DKPVSGEEMVVVRKVKRIYNVRTRSASCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARVTGTQWHQSDSTAAFKLWEELG 369
RWK A P+S EE V RKVKR Y++RTR ASCFCSAC S+Y+ C+V + YP LV AM++ VKE VIMDTG APVD I F KK C+ R+TGTQW + DS A K+WEELG
Sbjct: 411 RWKAQGAGLQDPISREEDVTCRKVKRTYSLRTRLASCFCSACLRSEYEQCYVSKTYPRLVPAMKDDVVKEPVIMDTGVAPVDENASEGINFPRYKKECKKKRITGTQWQEGDSATASKIWEELG 534
BLAST of mRNA_P-littoralis_Contig21.130.1 vs. uniprot
Match: A0A6H5L2L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L6_9PHAE) HSP 1 Score: 122 bits (305), Expect = 8.370e-29 Identity = 59/96 (61.46%), Postives = 71/96 (73.96%), Query Frame = 1
Query: 31 PVSGEEMVVVRKVKRIYNVRTRSASCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARVTGTQ 318
PVSGEE V RKVKR Y +RTR ASCFCSACQ +++ C+V + YP L+ A+R GEVKETVIMDTG APVD I FG RKK C++ R+TGT+
Sbjct: 614 PVSGEEDVTCRKVKRTYRLRTRLASCFCSACQRCEHEQCYVSKTYPRLLPALREGEVKETVIMDTGVAPVDEDNSRGIQFGSRKKECKIKRITGTK 709
BLAST of mRNA_P-littoralis_Contig21.130.1 vs. uniprot
Match: A0A6H5KGU5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU5_9PHAE) HSP 1 Score: 115 bits (287), Expect = 2.400e-26 Identity = 63/105 (60.00%), Postives = 73/105 (69.52%), Query Frame = 1
Query: 1 GRWKEVEADKPV---SGEEMVVVRKVKRIYNVRTRSASCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEVKETVIMDTGTAPVDGGPLTEITFGPRKKLCEMARV 306
GRWK VE PV SGEE+VVVRK R++ +RTR ASCFCSACQ QY+DC+V+RAYP LV MR G+VKETVIMDTG A G ITF R+ C +RV
Sbjct: 607 GRWKGVEGSGPVEPMSGEEVVVVRKETRVHMLRTRLASCFCSACQRFQYEDCYVNRAYPDLVPPMREGKVKETVIMDTGVALESEGK-AGITFRSRQSTCMKSRV 710 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig21.130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig21.130.1 >prot_P-littoralis_Contig21.130.1 ID=prot_P-littoralis_Contig21.130.1|Name=mRNA_P-littoralis_Contig21.130.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp MVVVRKVKRIYNVRTRSASCFCSACQDSQYKDCHVHRAYPGLVSAMRNGEback to top mRNA from alignment at P-littoralis_Contig21:509624..510179- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig21.130.1 ID=mRNA_P-littoralis_Contig21.130.1|Name=mRNA_P-littoralis_Contig21.130.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=556bp|location=Sequence derived from alignment at P-littoralis_Contig21:509624..510179- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig21:509624..510179- >mRNA_P-littoralis_Contig21.130.1 ID=mRNA_P-littoralis_Contig21.130.1|Name=mRNA_P-littoralis_Contig21.130.1|organism=Pylaiella littoralis U1_48|type=CDS|length=375bp|location=Sequence derived from alignment at P-littoralis_Contig21:509624..510179- (Pylaiella littoralis U1_48)back to top |