mRNA_P-littoralis_Contig21.127.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig21.127.1
Unique NamemRNA_P-littoralis_Contig21.127.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig21.127.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE)

HSP 1 Score: 438 bits (1126), Expect = 8.580e-153
Identity = 226/262 (86.26%), Postives = 234/262 (89.31%), Query Frame = 1
Query:    1 MTRRKVDEEQVRKACAAIDGGMSDRKAAAVVGVGHTSIADRRRGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVYLRDAARRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPQVAERSTRIYEANRITEEEEPRMVQFYERWAALLDEVKPEANHVHNTDET---------TKVFAESGQKVVGSMRSNSLENTTVVATISA-GHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYFKDF 756
            MTRRKVDEE+VRKA AAID GMS RKAA V GVG TSI DRRRGKVAMNAKVGPETILS+EEEDSLEDILL +ARN+LAVDRV+LRDA RRLCNDGRRIPWDPEKGPGKDWL GFLRRHP+VAERSTRIYEANRITE+EEPRMVQFYERWAAL DEVKP+ANHVHNTDET         TK FAESGQKVVGSMRSNS EN TVVATISA GHTWAPTI FK QRLQ DWFVERNGPEGARYTCTDSSFMQGDVFIAY KDF
Sbjct:    1 MTRRKVDEEKVRKAFAAIDNGMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALHDEVKPKANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRSNSRENITVVATISADGHTWAPTITFKRQRLQVDWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDF 262          
BLAST of mRNA_P-littoralis_Contig21.127.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE)

HSP 1 Score: 441 bits (1133), Expect = 8.690e-152
Identity = 228/262 (87.02%), Postives = 236/262 (90.08%), Query Frame = 1
Query:    1 MTRRKVDEEQVRKACAAIDGGMSDRKAAAVVGVGHTSIADRRRGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVYLRDAARRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPQVAERSTRIYEANRITEEEEPRMVQFYERWAALLDEVKPEANHVHNTDET---------TKVFAESGQKVVGSMRSNSLENTTVVATISA-GHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYFKDF 756
            MTRRKVDEEQVRKACAAID GMS RKAA V GVG TSI DRRRGKVAMNAKVG ETILSKEEEDSLEDILLF+ARN+LAV RV+LRDA RRLCNDGRRIPWDPEKGPGKDWLAGF RRHP+VAERSTRIYEANRITE+EEPRMVQFYERWAALLDE KPEANHVHNTDET         TK FAESGQKVVGSMR+NS ENTTVVATISA GHTWAPTIIFKGQRLQAD FVERNGPEGAR+TCTDSSFMQGDVF+ Y KDF
Sbjct:    1 MTRRKVDEEQVRKACAAIDDGMSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFKGQRLQADCFVERNGPEGARHTCTDSSFMQGDVFMNYLKDF 262          
BLAST of mRNA_P-littoralis_Contig21.127.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE)

HSP 1 Score: 419 bits (1078), Expect = 4.460e-144
Identity = 223/276 (80.80%), Postives = 231/276 (83.70%), Query Frame = 1
Query:    1 MTRRKVDEEQVRKACAAIDGGMSDRKAAAVVGVGHTSIADRRRGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVYLRDAARRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPQVAERSTRIYEANRITEEEEPRMVQFYERWAALLDEVKPEANHVHNTDETTKV---------FAESGQ--------------KVVGSMRSNSLENTTVVATISA-GHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYFKDF 756
            MTRRKVDEEQVRKACAAID GMS RKAA V GVG TSI DRRRGK AMNAKVGPETILSKEEEDSLE ILLF+ARN+LAVDRVYLRDA RRLCNDGRRIPWDPEKGPGKDWLAGFLRRH +VAERSTRI+EAN ITE+EEPRMVQFYERWAALLDEVKPEANHVHNTDET             AE  +              KVVGSMRSNS ENTTVVATISA GHTWAPTIIFKGQRLQADWFVERNG EGA+YTCTD SFMQGD+FIAY KDF
Sbjct:    1 MTRRKVDEEQVRKACAAIDDGMSVRKAAEVFGVGRTSIVDRRRGKAAMNAKVGPETILSKEEEDSLEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERWAALLDEVKPEANHVHNTDETEPPRXHRRKGPEAAEGARAHRHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGLEGAKYTCTDYSFMQGDLFIAYLKDF 276          
BLAST of mRNA_P-littoralis_Contig21.127.1 vs. uniprot
Match: A0A6H5KNQ5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ5_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 1.800e-117
Identity = 184/232 (79.31%), Postives = 197/232 (84.91%), Query Frame = 1
Query:   64 MSDRKAAAVVGVGHTSIADRRRGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVYLRDAARRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPQVAERSTRIYEANRITEEEEPRMVQFYERWAALLDEVKPEANHVHNTDETTKVFAESGQKVVGSMRSNSLENTTVVATISA-GHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYFKDF 756
            MS RKAA V GVG TSI DR  GKVAMNAKVGPETILSKEE+  L+DILLF+ARN+LAVDR++L DA R+LC+DGRRIPWDPEK PGKDWLAGFLRRHP+VAERSTRIYEANRITE+EEP MVQFYERWAAL    +        T  T + FAESGQKVVGSMRSNS ENTTVVATISA GHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDS F Q +VFIAY KDF
Sbjct:    1 MSVRKAAEVFGVGRTSIEDRCPGKVAMNAKVGPETILSKEEDSLLKDILLFAARNFLAVDRLHLGDAVRQLCDDGRRIPWDPEKVPGKDWLAGFLRRHPRVAERSTRIYEANRITEDEEPHMVQFYERWAALS--TRSNRRPTTCTIRTRQAFAESGQKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSFFTQENVFIAYLKDF 230          
BLAST of mRNA_P-littoralis_Contig21.127.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE)

HSP 1 Score: 352 bits (904), Expect = 4.720e-117
Identity = 183/232 (78.88%), Postives = 192/232 (82.76%), Query Frame = 1
Query:   64 MSDRKAAAVVGVGHTSIADRRRGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVYLRDAARRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPQVAERSTRIYEANRITEEEEPRMVQFYERWAALLDEVKPEANHVHNTDETTKVFAESGQKVVGSMRSNSLENTTVVATISAG-HTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYFKDF 756
            MS RKAA   GVG TSI DRRRGKVAMNAKVGPETILS EEEDSLEDILLF+ARN+LAVDRV+LRDA RRLCNDGRRI WDP++GPGKDWLAGFLRRHP+VAERSTRIYEANR+TE+EEPRMVQF+ERWAALLDEVKP ANHVHNTDET     E                T VVA ISA  HT APTIIFKGQRLQ DWF ERNGPEGARYTCT SSFMQGDVFIAY KDF
Sbjct:    1 MSVRKAAEDFGVGRTSIEDRRRGKVAMNAKVGPETILSNEEEDSLEDILLFAARNFLAVDRVHLRDAVRRLCNDGRRIIWDPDEGPGKDWLAGFLRRHPRVAERSTRIYEANRMTEDEEPRMVQFHERWAALLDEVKPAANHVHNTDETAGCSREPAA-------------TNVVANISADDHTLAPTIIFKGQRLQTDWFAERNGPEGARYTCTGSSFMQGDVFIAYLKDF 219          
BLAST of mRNA_P-littoralis_Contig21.127.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 1.450e-108
Identity = 169/262 (64.50%), Postives = 207/262 (79.01%), Query Frame = 1
Query:    1 MTRRKVDEEQVRKACAAIDGGMSDRKAAAVVGVGHTSIADRRRGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVYLRDAARRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPQVAERSTRIYEANRITEEEEPRMVQFYERWAALLDEVKPEANHVHNTDET---------TKVFAESGQKVVGSMRSNSLENTTVVATISA-GHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYFKDF 756
            M RR+VD +Q +KAC A+ GGMS RKAA V  +   S+  R  G+VAM+AKVGP T++S+EEE+S+ED LL++ RN LAV R++L +  R LC D R+ PWDPEKGPGKDWLAGFL RHP+V ER+TRIYEANR+T+E EPR+V+FY +WAALL+++KPEA+HVHNTDET          K + ++GQKVV S+R+NS ENTT+V TISA G TWAPTIIFKGQRLQ DWF E+NGP  ARYTCTDSSFMQG+VFI Y KDF
Sbjct:    1 MGRRRVDAQQAQKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDF 261          
BLAST of mRNA_P-littoralis_Contig21.127.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 4.290e-104
Identity = 166/257 (64.59%), Postives = 203/257 (78.99%), Query Frame = 1
Query:   16 VDEEQVRKACAAIDGGMSDRKAAAVVGVGHTSIADRRRGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVYLRDAARRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPQVAERSTRIYEANRITEEEEPRMVQFYERWAALLDEVKPEANHVHNTDET---------TKVFAESGQKVVGSMRSNSLENTTVVATISA-GHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYFKDF 756
            VD +Q +KAC A+ GGMS RKAA V  +   S+  R  G+VAM+AKVGP T++S+EEE+S+ED LL++ RN LAV R++L +  R LC D R+ PWDPEKGPGKDWLAGFL RHP+V ER+TRIYEANR+T+E EPR+V+FY +WAALL+++KPEA+HVHNTDET          K + ++GQKVV S+R+NS ENTT+V TISA G TWAPTIIFKGQRLQ DWF E+NGP  ARYTCTDSSFMQG+VFI Y KDF
Sbjct:  247 VDAQQAQKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDF 502          
BLAST of mRNA_P-littoralis_Contig21.127.1 vs. uniprot
Match: A0A6H5JRY4_9PHAE (HTH psq-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY4_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 1.450e-102
Identity = 154/170 (90.59%), Postives = 159/170 (93.53%), Query Frame = 1
Query:    1 MTRRKVDEEQVRKACAAIDGGMSDRKAAAVVGVGHTSIADRRRGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVYLRDAARRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPQVAERSTRIYEANRITEEEEPRMVQFYERWAALLDEVKPEANHVHNTDET 510
            MTRRKVDEEQVRKACAAID GMS RKAA V GVG TSI DRRRGKVAMNAKVG ETILSKEEEDSLEDILLF+ARN+LAV RV+LRDA RRLCNDGRRIPWDPEKGPGKDWLAGF RRHP+VAERSTRIYEANRITE+EEPRMVQFYERWAALLDE KPEANHVHNTDET
Sbjct:    1 MTRRKVDEEQVRKACAAIDDGMSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDET 170          
BLAST of mRNA_P-littoralis_Contig21.127.1 vs. uniprot
Match: A0A6H5K547_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K547_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 2.240e-97
Identity = 151/174 (86.78%), Postives = 158/174 (90.80%), Query Frame = 1
Query:    1 MTRRKVDEEQVRKACAAIDGGMSDRKAAAVVGVGHTSIADRRRGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVYLRDAARRLCNDGRRIPWDPEKGPGKDWLAGFLRRHPQVAERSTRIYEANRITEEEEPRMVQFYERWAALLDEVKPEANHVHNTDETTKVF 522
            MTR KVDEE+VRKA AAID GMS RKAA V GVG TSI DRRRGKVAMNAKVGPETILS+EEEDSLEDILL +ARN+LAVDRV+LRDA RRLCNDGRRIPWDPEKGPGKDWL GFLRRHP+VAERST IYEANRITE+EEPRMVQFYERWAALLDEVK EANHVHNTDET  V 
Sbjct:    1 MTRCKVDEEKVRKAFAAIDNGMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTHIYEANRITEDEEPRMVQFYERWAALLDEVKLEANHVHNTDETGTVL 174          
BLAST of mRNA_P-littoralis_Contig21.127.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 5.530e-96
Identity = 157/253 (62.06%), Postives = 184/253 (72.73%), Query Frame = 1
Query:  109 SIADRRRGKVAMNAKVGPETILSKEEEDSLEDILLFSARNYLAVDRVYLRDAARRLCNDGRRIPWDPEKGP---------------------------GKDWLAGFLRRHPQVAERSTRIYEANRITEEEEPRMVQFYERWAALLDEVKPEANHVHNTDET---------TKVFAESGQKVVGSMRSNSLENTTVVATISA-GHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYFKDF 756
            SI  R  G VAM AKVGP T+LS++EE+SLED+LL++ R+ LAV R++L +  R+LCND R IPWDPEK                             GKDWLAGFL+RHP+V+ER+TRIYE+NRITE+ EP +V+ Y++ AA+LDE KP+A+HVHNTDET          K FAE+GQKVV SMRSNSLENTTVV TISA G TWAPTIIFKGQRLQ DWF ERNGP+ ARYTCTDSSFMQGDVFI Y KDF
Sbjct:    5 SIKSRLDGAVAMKAKVGPATVLSEQEENSLEDVLLYAGRHCLAVGRLHLLETVRQLCNDSRPIPWDPEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKDWLAGFLKRHPRVSERTTRIYESNRITEDNEPCIVELYKKLAAILDEHKPKADHVHNTDETGPTPQGTKTMKAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDF 257          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig21.127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ62_9PHAE8.580e-15386.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFM5_9PHAE8.690e-15287.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRA3_9PHAE4.460e-14480.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNQ5_9PHAE1.800e-11779.31DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L2E0_9PHAE4.720e-11778.88DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JV04_9PHAE1.450e-10864.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ12_9PHAE4.290e-10464.59Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRY4_9PHAE1.450e-10290.59HTH psq-type domain-containing protein n=4 Tax=Ect... [more]
A0A6H5K547_9PHAE2.240e-9786.78HTH psq-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JBS6_9PHAE5.530e-9662.06DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig21contigP-littoralis_Contig21:483076..484586 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7029.ACYPI49245-PA
PFAMsDDE_1,HTH_psq
Model size774
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.88e-14
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota,38DQS@33154|Opisthokonta,3BGR7@33208|Metazoa,3D3JB@33213|Bilateria
DescriptionDDE superfamily endonuclease
Cds size774
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790023.1283207-CDS-P-littoralis_Contig21:483075..4833421680790023.1283207-CDS-P-littoralis_Contig21:483075..483342Pylaiella littoralis U1_48CDSP-littoralis_Contig21 483076..483342 -
1680790023.1555586-CDS-P-littoralis_Contig21:484079..4845861680790023.1555586-CDS-P-littoralis_Contig21:484079..484586Pylaiella littoralis U1_48CDSP-littoralis_Contig21 484080..484586 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig21.127.1prot_P-littoralis_Contig21.127.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig21 483076..484586 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig21.127.1

>prot_P-littoralis_Contig21.127.1 ID=prot_P-littoralis_Contig21.127.1|Name=mRNA_P-littoralis_Contig21.127.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=258bp
MTRRKVDEEQVRKACAAIDGGMSDRKAAAVVGVGHTSIADRRRGKVAMNA
KVGPETILSKEEEDSLEDILLFSARNYLAVDRVYLRDAARRLCNDGRRIP
WDPEKGPGKDWLAGFLRRHPQVAERSTRIYEANRITEEEEPRMVQFYERW
AALLDEVKPEANHVHNTDETTKVFAESGQKVVGSMRSNSLENTTVVATIS
AGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYFK
DFQAARRP
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mRNA from alignment at P-littoralis_Contig21:483076..484586-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig21.127.1 ID=mRNA_P-littoralis_Contig21.127.1|Name=mRNA_P-littoralis_Contig21.127.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1511bp|location=Sequence derived from alignment at P-littoralis_Contig21:483076..484586- (Pylaiella littoralis U1_48)
ATGACCCGGCGCAAGGTGGACGAGGAGCAGGTTCGGAAGGCCTGTGCAGC GATAGATGGCGGCATGTCGGATAGGAAGGCTGCTGCGGTCGTCGGGGTAG GTCATACGTCCATCGCAGACCGCCGCCGTGGCAAGGTGGCCATGAACGCG AAGGTTGGTCCCGAGACCATCCTGAGCAAAGAAGAGGAGGATTCGCTGGA AGATATTCTGCTGTTTTCTGCTCGCAACTACTTGGCTGTGGATCGGGTTT ACCTCAGAGATGCGGCGCGACGACTCTGCAACGACGGTCGGCGGATCCCT TGGGATCCAGAGAAGGGTCCGGGGAAAGATTGGCTTGCGGGCTTCCTTCG TAGGCACCCACAGGTGGCGGAGCGCTCGACCCGCATCTACGAGGCAAACA GGATCACCGAAGAAGAGGAGCCTCGCATGGTGCAGTTCTACGAGAGATGG GCAGCTCTCCTCGACGAGGTCAAACCGGAGGCCAACCACGTGCACAACAC GGACGAGGTGAAGATTCGCTCGTAGACTCTAGGTCTAGACTGGTCTAGTG TAGATATAGCAGTAGAAGTGTGGCAGCAGTAGAAAGTGCGCGGGTGACTG CTGTGCAAAGACCACGAAACATGTCCCACGAAAAATATCAGGCAGAGTTC TGCCCTCTTGCGGCGTTATCTGCTGTAGTGTAGTCTACAGAGGCCGTGCT CCCGCATTCCTGCTCAAAAATGCCGAAATTGCCGCTGACACTGGTCTAGA GTAGGCTACAGCAGTAGTTCCAGACACAAAAGTAGAGTACAGCACTATGG TAGTCTAAAATTCAATATTTTCAGAGCTGCATCGCATCGCCTTCAGCTGG TAGCTCGAGGGAACCTGCGGCGACGAACGTGTAACTAAAGTCTAGGGGAG CGATGTTGAGTAGATGCATGTGCCAACACACGAAATAATTGAGACTAGTC TACAGCACCCTGCTTTTGCTCTCCCGGTTGCCTCGTCCAGCTACCGCCAC AATGACGGTAGACTGCGTAGGTTAAAAGCCCTCGCCGCACGAAAATAAAT GAAAAAGAGCCACCGCGTGTCCCCCCCCCGTCCACCTCCGTTGCTTGGCG CGCACGATATTGACTGTAAATGTTTGGATGCGTGCGTACACTACTGCTGG TAATTTTGACTATCCATTAGACTAGCCTAACGCCCCCCCCCCCGACCCTC ACATACGCGTTCCCGTTGCAGGTACCACCCCGCAAGGAACCAAGACGACA AAGGTGTTTGCGGAATCAGGGCAGAAGGTGGTTGGTTCGATGCGCTCCAA CTCGCTAGAGAACACCACCGTGGTCGCTACCATCAGCGCTGGTCACACCT GGGCACCAACCATTATCTTCAAAGGGCAACGACTTCAGGCCGATTGGTTT GTAGAGCGAAACGGCCCGGAGGGTGCGAGGTACACCTGTACGGATTCTTC GTTCATGCAGGGAGACGTATTCATCGCCTACTTCAAGGATTTTCAAGCAG CTCGGCGACCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig21:483076..484586-

>mRNA_P-littoralis_Contig21.127.1 ID=mRNA_P-littoralis_Contig21.127.1|Name=mRNA_P-littoralis_Contig21.127.1|organism=Pylaiella littoralis U1_48|type=CDS|length=774bp|location=Sequence derived from alignment at P-littoralis_Contig21:483076..484586- (Pylaiella littoralis U1_48)
ATGACCCGGCGCAAGGTGGACGAGGAGCAGGTTCGGAAGGCCTGTGCAGC
GATAGATGGCGGCATGTCGGATAGGAAGGCTGCTGCGGTCGTCGGGGTAG
GTCATACGTCCATCGCAGACCGCCGCCGTGGCAAGGTGGCCATGAACGCG
AAGGTTGGTCCCGAGACCATCCTGAGCAAAGAAGAGGAGGATTCGCTGGA
AGATATTCTGCTGTTTTCTGCTCGCAACTACTTGGCTGTGGATCGGGTTT
ACCTCAGAGATGCGGCGCGACGACTCTGCAACGACGGTCGGCGGATCCCT
TGGGATCCAGAGAAGGGTCCGGGGAAAGATTGGCTTGCGGGCTTCCTTCG
TAGGCACCCACAGGTGGCGGAGCGCTCGACCCGCATCTACGAGGCAAACA
GGATCACCGAAGAAGAGGAGCCTCGCATGGTGCAGTTCTACGAGAGATGG
GCAGCTCTCCTCGACGAGGTCAAACCGGAGGCCAACCACGTGCACAACAC
GGACGAGACGACAAAGGTGTTTGCGGAATCAGGGCAGAAGGTGGTTGGTT
CGATGCGCTCCAACTCGCTAGAGAACACCACCGTGGTCGCTACCATCAGC
GCTGGTCACACCTGGGCACCAACCATTATCTTCAAAGGGCAACGACTTCA
GGCCGATTGGTTTGTAGAGCGAAACGGCCCGGAGGGTGCGAGGTACACCT
GTACGGATTCTTCGTTCATGCAGGGAGACGTATTCATCGCCTACTTCAAG
GATTTTCAAGCAGCTCGGCGACCG
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