mRNA_P-littoralis_Contig21.121.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig21.121.2
Unique NamemRNA_P-littoralis_Contig21.121.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig21.121.2 vs. uniprot
Match: D7FNP7_ECTSI (Caffeate O-Methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNP7_ECTSI)

HSP 1 Score: 516 bits (1329), Expect = 8.510e-179
Identity = 251/327 (76.76%), Postives = 278/327 (85.02%), Query Frame = 2
Query:   71 MSRKQKMFELCDKVHRDLKMAGLPTDGCATDGTEHSSIRAMWSSELGFGPTAARQQQRQQAIPEREVEDGGARIEHESGGSNVGLATKQPATAVPAAAPATTTGGGDGAVRWYERAYDYWEDGENCPLDDDGVLGGYGHISPTDIAGSGAFLDELRSVRPLLGDSNAADCGAGIGRVTKHLLLGRFDTVDIVEQSPRLIQAAPKYIGRDRDRTTCVCLGLQDFFPEEETYDLIWIQWVVGHFTDVDFLKLINRCRAALRKDGLVVIKDNVVGEGEGAFKVDSEDSSLTRSLGYFRSLFNHGGVKVVHQARQDGFPGELFPVYMFALE 1051
            MSRKQ++ ELCDKVHRDLK+AGLPTDGCATDGTEHSSI AMWSSELGFGP         QA+P    E  G     E  G     A  +P +  PA++ +T   GG GAV+WYERAYDYWEDG+NCP+DDDGVLGGYGHISPTDIAGS AFLDEL+ +RPLLGD  AADCGAGIGRVTKHLLL RFDTVDIVEQSPRLIQAAPKY+GRDRDRTTCVC+GLQDFFP E++YDL+WIQWVVGHFTDVD LKL+ RCR+ALRK GL+V+KDNV+G+GEGAFKVDSEDSS+TRSLGYFRSLFNHGGV+VVHQ RQDGFPGELFPVYMFALE
Sbjct:    1 MSRKQQVLELCDKVHRDLKLAGLPTDGCATDGTEHSSIAAMWSSELGFGPM--------QALPAGGGEATGTTTPPEKIGDK--SAKARPQSTKPASSNSTGGDGGGGAVQWYERAYDYWEDGDNCPVDDDGVLGGYGHISPTDIAGSAAFLDELKRMRPLLGDETAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLIQAAPKYVGRDRDRTTCVCVGLQDFFPPEDSYDLVWIQWVVGHFTDVDLLKLLARCRSALRKGGLIVVKDNVIGQGEGAFKVDSEDSSMTRSLGYFRSLFNHGGVRVVHQTRQDGFPGELFPVYMFALE 317          
BLAST of mRNA_P-littoralis_Contig21.121.2 vs. uniprot
Match: A0A1V9YYT0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYT0_9STRA)

HSP 1 Score: 254 bits (650), Expect = 2.910e-77
Identity = 118/216 (54.63%), Postives = 157/216 (72.69%), Query Frame = 2
Query:  404 WYERAYDYWEDGENCPLDDDGVLGGYGHISPTDIAGSGAFLDELRSVRPLLGDSNAADCGAGIGRVTKHLLLGRFDTVDIVEQSPRLIQAAPKYIGRDRDRTT-CVCLGLQDFFPEEETYDLIWIQWVVGHFTDVDFLKLINRCRAALRKDGLVVIKDNVVGEGEGAFKVDSEDSSLTRSLGYFRSLFNHGGVKVVHQARQDGFPGELFPVYMFAL 1048
            WY +  DYWED  NCP D  GVLGGYG+ISP DI GS +FLD ++++RP    S+A DCG GIGRV KHLLL  F TVD++EQSPRL++AAP+YIG+D+ R    +C+G+QDF P   +YDLIW QWV  H  DVDF+  + RC+ ALR  G++ IK+N++ +G   ++VD EDSSLTRS  Y++S+F   G+K++ + RQ GFP EL+PV  +AL
Sbjct:   54 WYTQGADYWEDEVNCPPDVGGVLGGYGYISPVDIEGSLSFLDRVQALRPEFTRSHAIDCGGGIGRVVKHLLLPHFQTVDLLEQSPRLLKAAPRYIGKDKSRVRQLLCMGMQDFDPAPMSYDLIWCQWVCPHLMDVDFITFLQRCQRALRPGGVICIKENIIVDGS-PYEVDEEDSSLTRSTAYYKSIFRQAGLKILTEERQTGFPEELYPVMSYAL 268          
BLAST of mRNA_P-littoralis_Contig21.121.2 vs. uniprot
Match: A0A067BRJ5_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BRJ5_SAPPC)

HSP 1 Score: 244 bits (624), Expect = 2.090e-73
Identity = 112/216 (51.85%), Postives = 154/216 (71.30%), Query Frame = 2
Query:  404 WYERAYDYWEDGENCPLDDDGVLGGYGHISPTDIAGSGAFLDELRSVRPLLGDSNAADCGAGIGRVTKHLLLGRFDTVDIVEQSPRLIQAAPKYIGRDRDRT-TCVCLGLQDFFPEEETYDLIWIQWVVGHFTDVDFLKLINRCRAALRKDGLVVIKDNVVGEGEGAFKVDSEDSSLTRSLGYFRSLFNHGGVKVVHQARQDGFPGELFPVYMFAL 1048
            WY +  DYWED ENCP D  GVLGGYG+ISP DI GS AFL  ++++RP      A DCG GIGRV KHLLL  F +VD++EQSPRL++AAP+YIG ++ R  T +C+G+QDF P   +YDLIW QWV  H  D+DF+K + RC+ ALR  G++ IK+N++ +G   +++D +DSS+TRS  Y++S+F    + ++   RQ+GFP EL+PV  +AL
Sbjct:   54 WYTQGADYWEDEENCPPDVGGVLGGYGYISPIDIEGSTAFLARVQALRPAFKRDRAIDCGGGIGRVVKHLLLPLFASVDLLEQSPRLLKAAPRYIGAEKHRVETLLCMGMQDFDPSPNSYDLIWCQWVCPHLMDLDFIKFLQRCQQALRPGGVICIKENIIVDGS-PYELDEDDSSVTRSAAYYKSIFRQANLTLLADERQEGFPEELYPVMTYAL 268          
BLAST of mRNA_P-littoralis_Contig21.121.2 vs. uniprot
Match: A0A836CCK3_9STRA (AdoMet dependent proline di-methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCK3_9STRA)

HSP 1 Score: 244 bits (622), Expect = 2.810e-73
Identity = 126/238 (52.94%), Postives = 159/238 (66.81%), Query Frame = 2
Query:  407 YERAYDYWEDGENCPLDDDGVLGGYGHISPTDIAGSGAFLDELRSVRPLLGDSNAADCGAGIGRVTKHLLLGRFDTVDIVEQSPRLIQAAPKYIGRDRDRTTCVCLGLQDFFPEEETYDLIWIQWVVGHFTDVDFLKLINRCRAALRKDGLVVIKDNVVG---------------EGEG-------AFKVDSEDSSLTRSLGYFRSLFNHGGVKVVHQARQDG-FPGELFPVYMFALE 1051
            + +AYDYWE     P   +GVLGGYG +SP DIAGS  FL EL+S+RP LG   AADCGAGIGR+T+  LL  FD VD+VEQSP+L++AAP+++G  RD    +C+GLQDF P  +TYD+IW+QWVVGH TDVDF+K + RCR ALR  G++V+KDN                  E  G       AF +DS+DSS+ RS+ YFRSLF H  + VV Q R+   FP E+FPV+ FALE
Sbjct:   23 FPKAYDYWE---ASPSTIEGVLGGYGELSPIDIAGSTKFLAELKSLRPGLGCERAADCGAGIGRITRDFLLQHFDAVDMVEQSPKLLEAAPRFLGPLRDCVEYICMGLQDFCPPADTYDVIWVQWVVGHLTDVDFVKFLRRCRQALRPHGVLVLKDNCCSCDGSADAPDGTDNSCEDSGGNAGASSAFVLDSDDSSVARSVAYFRSLFKHADMDVVLQRREASIFPEEIFPVFYFALE 257          
BLAST of mRNA_P-littoralis_Contig21.121.2 vs. uniprot
Match: K3X303_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X303_GLOUD)

HSP 1 Score: 244 bits (624), Expect = 5.930e-73
Identity = 116/219 (52.97%), Postives = 153/219 (69.86%), Query Frame = 2
Query:  404 WYERAYDYWEDGENCPLDDDGVLGGYGHISPTDIAGSGAFLDELRSVRPLLGDSNAADCGAGIGRVTKHLLLGRFDTVDIVEQSPRLIQAAPKYIGRDRDRTTCV----CLGLQDFFPEEETYDLIWIQWVVGHFTDVDFLKLINRCRAALRKDGLVVIKDNVVGEGEGAFKVDSEDSSLTRSLGYFRSLFNHGGVKVVHQARQDGFPGELFPVYMFAL 1048
            WY  A+D+WED +NCP+ D+GVLGG+ H+SP DI GS  FL  ++ +RP      A DCGAGIGRV+K LLL  F  VD+VEQSPRL+Q+ P+Y+GR    T  +    C+GLQDF+PEE+ YDLIWIQWV  H TDVDF+  + RC+ AL  +G + +K+NVV  G   F++D EDSS+TRS  Y++SLF   G+ ++ +  Q  FP EL+PV MFAL
Sbjct:   84 WYSSAHDFWEDEKNCPVTDNGVLGGFAHVSPVDIKGSERFLARVQKLRPGWERQLAVDCGAGIGRVSKFLLLPTFKQVDLVEQSPRLLQSVPQYVGRTSSDTKRIRNLYCMGLQDFYPEEQKYDLIWIQWVSSHLTDVDFVHFLKRCKQALAPNGWIGVKENVVLSGT-PFELDREDSSITRSAAYYKSLFKQAGLTIIVEELQQHFPRELYPVKMFAL 301          
BLAST of mRNA_P-littoralis_Contig21.121.2 vs. uniprot
Match: A0A485KWK6_9STRA (Aste57867_12822 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWK6_9STRA)

HSP 1 Score: 239 bits (611), Expect = 3.630e-71
Identity = 114/216 (52.78%), Postives = 147/216 (68.06%), Query Frame = 2
Query:  404 WYERAYDYWEDGENCPLDDDGVLGGYGHISPTDIAGSGAFLDELRSVRPLLGDSNAADCGAGIGRVTKHLLLGRFDTVDIVEQSPRLIQAAPKYIGRDRDRT-TCVCLGLQDFFPEEETYDLIWIQWVVGHFTDVDFLKLINRCRAALRKDGLVVIKDNVVGEGEGAFKVDSEDSSLTRSLGYFRSLFNHGGVKVVHQARQDGFPGELFPVYMFAL 1048
            WY    DYWE  ENCP  D GVLGGYGHISP D+ GS AFLD L+  RP +  + A DCG G+GRV K+LLL R+  VD +EQS RL+ AAP YIG ++ R     C+G+QDF P   +YDLIW QWV+GH TDVDF+  + RC+AAL   G++ IK+N + EG   + VD +DSSL RS  Y++S+F   G+ ++ + RQ GFP EL+PV  +AL
Sbjct:   77 WYTSGADYWEAEENCPPTDMGVLGGYGHISPIDVEGSAAFLDRLQKSRPTMQQNLAIDCGCGVGRVVKNLLLPRYTAVDCLEQSQRLLAAAPSYIGAEKARVRNLYCMGMQDFEPVARSYDLIWCQWVLGHLTDVDFVAFLKRCQAALAPGGVICIKENAINEGV-PYYVDKDDSSLGRSSAYYKSIFRQAGLTLLAEERQCGFPEELYPVITYAL 291          
BLAST of mRNA_P-littoralis_Contig21.121.2 vs. uniprot
Match: W4G1H4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1H4_9STRA)

HSP 1 Score: 238 bits (608), Expect = 5.540e-71
Identity = 110/218 (50.46%), Postives = 145/218 (66.51%), Query Frame = 2
Query:  404 WYERAYDYWEDGENCPLDDDGVLGGYGHISPTDIAGSGAFLDELRSVRPLLGDSNAADCGAGIGRVTKHLLLGRFDTVDIVEQSPRLIQAAPKYIGRDRDRT---TCVCLGLQDFFPEEETYDLIWIQWVVGHFTDVDFLKLINRCRAALRKDGLVVIKDNVVGEGEGAFKVDSEDSSLTRSLGYFRSLFNHGGVKVVHQARQDGFPGELFPVYMFAL 1048
            WY     YWED  NCP  DDGVLGGYG ISP D+ GS +FLD ++++RP +  + A DCG G+GRV KHLLL R+D+VD +EQS RL+   P YIGR  D +      C+G+QDF PE   YDLIW QWV+GH TD DF+  + RC+ AL  DG++ IK+N + EG   + VD +DSSL RS  Y++S+F   G+ ++ +  Q  FP EL+PV  +AL
Sbjct:   56 WYTSGAKYWEDESNCPPTDDGVLGGYGRISPADVEGSASFLDRIQTLRPTMKRNLAIDCGCGVGRVVKHLLLPRYDSVDCLEQSQRLLNTVPSYIGRSSDTSRIRNLYCMGMQDFQPEPHAYDLIWCQWVLGHLTDSDFVAFLKRCQKALAPDGVICIKENAINEGV-PYYVDKDDSSLGRSSVYYKSIFRQAGLTLLAETEQSDFPDELYPVITYAL 272          
BLAST of mRNA_P-littoralis_Contig21.121.2 vs. uniprot
Match: A0A6G0WSU0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSU0_9STRA)

HSP 1 Score: 238 bits (607), Expect = 7.080e-71
Identity = 108/216 (50.00%), Postives = 151/216 (69.91%), Query Frame = 2
Query:  404 WYERAYDYWEDGENCPLDDDGVLGGYGHISPTDIAGSGAFLDELRSVRPLLGDSNAADCGAGIGRVTKHLLLGRFDTVDIVEQSPRLIQAAPKYIGRDRDRT-TCVCLGLQDFFPEEETYDLIWIQWVVGHFTDVDFLKLINRCRAALRKDGLVVIKDNVVGEGEGAFKVDSEDSSLTRSLGYFRSLFNHGGVKVVHQARQDGFPGELFPVYMFAL 1048
            WY    +YWE+ ENCP +D GVLGGYGHISP D+ GS AFLD ++++RP +  + A DCG G+GRV  +LLL R+  VD +EQS RL+Q  P Y+G ++ R     C+G+QDF P+  +YDLIW QWV+GH TDVDF+  + RC+AAL   G++ IK+N + EG   + VD +DSSL RS  Y++S+F   G+ ++ + +Q+GFP EL+PV  +AL
Sbjct:   55 WYTSGAEYWENEENCPPNDQGVLGGYGHISPVDVEGSSAFLDHIQTLRPAMQRNLAIDCGCGVGRVVNNLLLPRYTAVDCLEQSQRLLQTIPSYVGPEKARIRNLYCMGMQDFDPKPGSYDLIWCQWVLGHLTDVDFVAFLKRCQAALAPGGVICIKENAINEGV-PYYVDKDDSSLGRSSVYYKSIFRQAGLTLLAETKQEGFPDELYPVITYAL 269          
BLAST of mRNA_P-littoralis_Contig21.121.2 vs. uniprot
Match: A0A5D6Y378_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y378_9STRA)

HSP 1 Score: 232 bits (591), Expect = 5.640e-68
Identity = 116/225 (51.56%), Postives = 151/225 (67.11%), Query Frame = 2
Query:  386 GDGAVRWYERAYDYWEDGENCPLDDDGVLGGYGHISPTDIAGSGAFLDELRSVRPLLGDSNAADCGAGIGRVTKHLLLGRFDTVDIVEQSPRLIQAAPKYIGR---DRDRTTCV-CLGLQDFFPEEETYDLIWIQWVVGHFTDVDFLKLINRCRAALRKDGLVVIKDNVVGEGEGAFKVDSEDSSLTRSLGYFRSLFNHGGVKVVHQARQDGFPGELFPVYMFAL 1048
            GD A  WY  A+ YWED  NCP+ D+GVLGG+ H+SP DI GS AF   +  +RP      A DCGAGIGRV+K LLL  F+ VD+VEQSPRL+Q+ P+Y+GR   D +R   + C+GLQDF P  E+YDLIWIQWV  H TD DF++ + RC+ ALR  G + +K+N   +GE  +++D EDSS+T       SLF   G+KV+ + RQ  FP EL+PV M+AL
Sbjct:   93 GDRAPTWYASAHAYWEDERNCPVSDNGVLGGFAHVSPADIQGSEAFFARVSKLRPAWRREVAVDCGAGIGRVSKFLLLPHFEHVDLVEQSPRLLQSVPQYVGRFNSDVERVRSLYCMGLQDFEPAPESYDLIWIQWVSSHLTDADFVRFLQRCKHALRPHGWIGVKENTFLDGE-PYELDKEDSSIT-------SLFKQAGLKVIAKERQQHFPQELYPVTMYAL 309          
BLAST of mRNA_P-littoralis_Contig21.121.2 vs. uniprot
Match: A0A1W0A7R8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7R8_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.500e-67
Identity = 113/211 (53.55%), Postives = 151/211 (71.56%), Query Frame = 2
Query:  404 WYERAYDYWEDGENCPLDDDGVLGGYGHISPTDIAGSGAFLDELRSVRPLLGDSNAADCGAGIGRVTKHLLLGRFDTVDIVEQSPRLIQAAPKYIGRDRDRTT-CVCLGLQDFFPEEETYDLIWIQWVVGHFTDVDFLKLINRCRAALRKDGLVVIKDNVVGEGEGAFKVDSEDSSLTRSLGYFRSLFNHGGVKVVHQARQDGFPGELFPV 1033
            WY +  DYWED  NCP D  GVLGGYG+IS  DI GS +FL  ++S+RP L    A DCG GIGRV KHLLL +F TVD++EQSPRL++AAPKYIG +  R    +CLG+QDF P  ++YDLIW QWV  H TD+DF+  + +C+ +LR  G++ IK+N + +G   F+VD EDSSLTRS  Y++S+F   G+ ++++ RQ GFP EL+P+
Sbjct:   31 WYSQGADYWEDEVNCPSDVGGVLGGYGYISQVDIEGSISFLKRVQSIRPELKHEYAIDCGGGIGRVVKHLLLLQFQTVDLLEQSPRLLKAAPKYIGDENHRVREYICLGMQDFNPSPKSYDLIWCQWVCPHLTDIDFIDYLTKCQLSLRDGGVICIKENTIADGS-PFEVDEEDSSLTRSAAYYKSIFRQAGLTILYEERQRGFPEELYPL 240          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig21.121.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNP7_ECTSI8.510e-17976.76Caffeate O-Methyltransferase n=2 Tax=Ectocarpus Ta... [more]
A0A1V9YYT0_9STRA2.910e-7754.63Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067BRJ5_SAPPC2.090e-7351.85Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A836CCK3_9STRA2.810e-7352.94AdoMet dependent proline di-methyltransferase-doma... [more]
K3X303_GLOUD5.930e-7352.97Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A485KWK6_9STRA3.630e-7152.78Aste57867_12822 protein n=1 Tax=Aphanomyces stella... [more]
W4G1H4_9STRA5.540e-7150.46Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6G0WSU0_9STRA7.080e-7150.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A5D6Y378_9STRA5.640e-6851.56Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1W0A7R8_9STRA1.500e-6753.55Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig21contigP-littoralis_Contig21:465659..469438 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FNP7
Preferred nameMETTL11B
PFAMsMethyltransf_PK
Model size1747
Max annot lvl2759|Eukaryota
KEGG koko:K14317,ko:K16219,ko:K19579
KEGG TC1.I.1
KEGG Pathwayko03013,ko05169,map03013,map05169
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0002181,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006325,GO:0006412,GO:0006464,GO:0006479,GO:0006480,GO:0006518,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008276,GO:0008757,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018013,GO:0018016,GO:0018193,GO:0018194,GO:0018201,GO:0018208,GO:0018209,GO:0019538,GO:0022402,GO:0031365,GO:0031974,GO:0031981,GO:0032259,GO:0034641,GO:0034645,GO:0035568,GO:0035570,GO:0035572,GO:0035573,GO:0036211,GO:0042054,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0051276,GO:0070013,GO:0071704,GO:0071840,GO:0071885,GO:0071891,GO:0140096,GO:1901564,GO:1901566,GO:1901576
Exons4
Evalue2.24e-183
EggNOG OGsKOG3178@1|root,KOG3178@2759|Eukaryota
Ec32 ortholog descriptionCaffeate O-Methyltransferase
Ec32 orthologEc-01_004720.1
EC2.1.1.244,2.1.1.299
DescriptionO-methyltransferase activity
Cds size984
COG categoryD
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig21.121.2prot_P-littoralis_Contig21.121.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig21 466352..469368 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790022.8547761-UTR-P-littoralis_Contig21:465658..4663511680790022.8547761-UTR-P-littoralis_Contig21:465658..466351Pylaiella littoralis U1_48UTRP-littoralis_Contig21 465659..466351 -
1680790022.9371667-UTR-P-littoralis_Contig21:469368..4694381680790022.9371667-UTR-P-littoralis_Contig21:469368..469438Pylaiella littoralis U1_48UTRP-littoralis_Contig21 469369..469438 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790022.884913-CDS-P-littoralis_Contig21:466351..4666721680790022.884913-CDS-P-littoralis_Contig21:466351..466672Pylaiella littoralis U1_48CDSP-littoralis_Contig21 466352..466672 -
1680790022.9011753-CDS-P-littoralis_Contig21:467230..4673881680790022.9011753-CDS-P-littoralis_Contig21:467230..467388Pylaiella littoralis U1_48CDSP-littoralis_Contig21 467231..467388 -
1680790022.913451-CDS-P-littoralis_Contig21:468284..4686301680790022.913451-CDS-P-littoralis_Contig21:468284..468630Pylaiella littoralis U1_48CDSP-littoralis_Contig21 468285..468630 -
1680790022.926854-CDS-P-littoralis_Contig21:469209..4693681680790022.926854-CDS-P-littoralis_Contig21:469209..469368Pylaiella littoralis U1_48CDSP-littoralis_Contig21 469210..469368 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig21.121.2

>prot_P-littoralis_Contig21.121.2 ID=prot_P-littoralis_Contig21.121.2|Name=mRNA_P-littoralis_Contig21.121.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=328bp
MSRKQKMFELCDKVHRDLKMAGLPTDGCATDGTEHSSIRAMWSSELGFGP
TAARQQQRQQAIPEREVEDGGARIEHESGGSNVGLATKQPATAVPAAAPA
TTTGGGDGAVRWYERAYDYWEDGENCPLDDDGVLGGYGHISPTDIAGSGA
FLDELRSVRPLLGDSNAADCGAGIGRVTKHLLLGRFDTVDIVEQSPRLIQ
AAPKYIGRDRDRTTCVCLGLQDFFPEEETYDLIWIQWVVGHFTDVDFLKL
INRCRAALRKDGLVVIKDNVVGEGEGAFKVDSEDSSLTRSLGYFRSLFNH
GGVKVVHQARQDGFPGELFPVYMFALE*
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mRNA from alignment at P-littoralis_Contig21:465659..469438-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig21.121.2 ID=mRNA_P-littoralis_Contig21.121.2|Name=mRNA_P-littoralis_Contig21.121.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3780bp|location=Sequence derived from alignment at P-littoralis_Contig21:465659..469438- (Pylaiella littoralis U1_48)
CGGATCCCGAGTGTAGATCCCTCTTACCCTCCTTCTCTGTCTGCTTCTCT TCGCATGTGGCAACGGAAAAATGAGCCGCAAACAAAAGATGTTTGAGCTG TGCGACAAAGTACACAGAGATCTAAAGATGGCTGGGTTGCCCACCGATGG GTGTGCCACTGACGGCACCGAGCACTCAAGCATAAGGGCAATGTGGTCCT CGGAGCTTGGTTTTGGGCCTACCGCCGCGGTAGGTATTGTTTTTTCGATG TGCGCGTATGCGTGTTCGTGTGCATGTGCGTATGTCGCAACTCCAGCGTA CATATACCTTATCTCTATTGAAACCACACCATGCAGTAATTTGTAATTTG TGCCGGTGTTCCTCAAGGTCAACACGTTTTTTGAAACTGCAACACGACTC TTTCCTTCTTTGCTGCTGTAATTTCGAATTTTTAATACTGTTTTAAGAGC TCCTTCTTGAAAACAGAGATGAGCCAAATGAAAGCATTTTCCAAACCTGA AAGTGTACATGCGGTATACCCAGCCAGAGAGCGGTATACGAAGTAATATA ATAATGGACATTCAGCGGTACCAGGTATGATATTAATTGCAGCCTGCTTC GGTTGTGATTTTATTTCGAATAATTTTCTCTCTGCGCCCAAAACAAGGCA TGAATGAGAGCGTTGGGTAGCGACATGTTGCAAACAGATTCCGCGGTGTT TTCGTTGTAAACTTGTTTGGCCGTGCTGTCATTCTGCCCATCCATTCCAA AAACATACCATACGCAAGCGCGCTCGCGCCCCCACGCCCCCTGCTGACTG CAAACCAGCGACAACAACAGCGACAACAAGCGATTCCGGAAAGGGAGGTG GAGGACGGAGGGGCACGAATAGAACACGAATCCGGTGGCAGTAATGTGGG CCTTGCAACCAAACAGCCTGCTACTGCTGTTCCTGCTGCCGCTCCCGCTA CAACCACCGGCGGCGGTGACGGAGCGGTGCGATGGTACGAGCGCGCATAC GACTACTGGGAAGATGGCGAAAACTGTCCGCTCGACGACGACGGGGTTTT GGGGGGCTACGGGCACATATCGCCCACCGACATCGCTGGTTCAGGGGCAT TTCTGGACGAGCTCCGGAGTGTGAGACCCCTCCTTGGCGACTCGAACGCG GCAGGTGAGATGTGAGGCGACCTTAATTGATTGCCGGAGTGGGGTTGGGG AGTGAGTTGCGTTGGGTTGGGTAGACCTTCTCGGGTTGCAAGCTTTTGCG GCGGGCGGCGGGCGGCGGGCGAACTCGCACTTGTTGTTCGCTTTCGTGTC GTTTCGTGTCGTGTCGTGGTCGTGACGTTTTTTTTGTTCTTTTTTTACCC ACCTGCTATCAAATAGCAGTAGATCTACCCACCTGCTGCATGCAGCAGTA GGTTTGTGTTTGATGAGGGACCAGAAGAGCGATAAGCGGAGTGGACCCAA CAGTAGTGACTTAGGAAAGAACGCTGGAACTTACTGTTGCGTGTCGATCG ACGTGGGCTACCTGCTATCAAATAGCAGTAGATCTACCCTACTGCTGCAA TGCAGCAGTAGGTTTGTGTTTGATGAGGGACCAGAAGGGCGATAAGCGGA GTGGGCCCAACAGTAGTGACTTAGGAAAGAACGCTGGAACTTACTGTTGC GTGTCGATCGACGTGGGCTTTTCAACATTGAACTCATGCGCGTGAGTCGG TCCTGACGGATGACAGAGTGGCCTTCCGACCATACTCTCTCACCAATCTT GCCGCCGGTAAAACGCGCCACGATTGTGCGAGCAAACGACAAGAACAATG CAGAGGCGATTCTGTAAGCACAACCAAATGTGGTCATTACTTCATTGCTG ACAAATAGGGCTGTGTTGCTCTCGAATGTTTTTTCGTTGTTGGTGTCCAT ACGGAAGTGTTCTGGCCGTAACAAACAGATTCGGTATGCGCTACCGATTT TGACGAAGTATGCAAAAAAAGCGTCGATTGCTCTACATGGACAAGGTGGT GTGACCTTGGTTTTGTTTTCTCATCGTGCGTCTGTGTCGACACTATCCAG ATTGCGGTGCCGGCATTGGCCGGGTAACAAAGCACTTACTGCTCGGCAGA TTCGACACGGTCGATATTGTGGAACAGAGCCCGCGATTGATCCAAGCAGC CCCCAAGTACATTGGCCGAGATCGAGATCGCACCACTTGCGTGTGTTTGG GGCTTCAGGTGAGAGAAGTGAGAGGATCCGCGTCGTTTTGGTGCGTATGC ATGATGTCACACCCATGACCATCGTTTCGTGACGTGCAAAATACTTCATA CCGGTATATCGCACACGGTTATTTTTGTCGTGATAGGCATTTGATCCGAC GCAGGCAGTGTGCGGTCTCGTCACACACCACTGACACCTCTGTAAAATTG ATTCAAACATTTTAGCCCTGGCGCTGGTGCTTACGTGGCAAATGCAGGCG TCAACAGATCGGTTAAGAAAGCACGGCAGACAGAGTTCTTGCTCGCTGTT GTACACTTGCAGTATCACCCTACGCTGCTGTCACACCTCCTGCTGTACTG CTGCACCGCACGATCGCGATTGCAGTGGGAGGCGCGTGTTTTTGTTACAC TATTTTCCTATTATTGCCCGTCCCAGTGCCCAACAGCTTGCCGTGTGCGC GAACATCCACAAGTAGACTGCGTACTCTCAACTGCTCCGCATTTTACCCC GAGTACGTCGCTTGCTTGTCGTTTTCACCTTTTTTCGCCATCCCTCTGCC CCCCCGTGCATTCCAGGATTTTTTCCCGGAGGAGGAAACCTACGACCTCA TCTGGATCCAGTGGGTCGTGGGACACTTCACAGACGTCGATTTCCTCAAG CTCATCAACCGCTGCCGCGCGGCCCTCCGAAAGGACGGTCTCGTCGTGAT CAAGGACAACGTCGTAGGGGAGGGAGAGGGAGCGTTCAAGGTGGACAGCG AGGACAGCAGTCTCACACGATCACTGGGCTACTTCCGGAGTCTTTTCAAC CACGGGGGGGTGAAGGTAGTGCACCAGGCGCGGCAGGACGGGTTCCCCGG AGAGCTGTTCCCGGTTTACATGTTTGCGCTTGAGTAAATGCAGGACAAAG CATGAGGTTGTGATTCATTGGGAATGAAAGTGCAGCGGGTTTTCTGCGTT TTTCATCTTGTAAAATAAATGGGTGACATATAAACTGTTCCCGGTTTACG TGTTTGCGCTCGAGTAGCGCAAAACGAACGAAGCGTGGGGTTGTGATCCA CTCGGAATAAAAGTGTCGCGGGTTTTCTCCGACGATCTGCGATTACATAA AAAGCATGTATCATAGAAAAAGTGCATCAGGTATCATGCGATTCTTACGT ATTGCTGGGAGACGATGTCGGCGCTCTGAATGGGGATGATTCTCCACATA CCGAGTGAAGGCAGTGCAGTGTTGGTTGCTGTGAATGCTGGTGCCTACAC ACCTGTGTGTGTTGCGTGTGTTGGTGTCTTCCATGCCTTTCATTCTTGGC ACAAGTCTACACCTTTATGTGAAATGGGTGCACCATCCGGGGTACACTAA AGGAAGGTCACGCTGGAGTTTTTGTTTCATTTCGACTCCGTCTACGGTGC CTGACTTGCTTATCTCTTAATTTTTTCTTCCTATGTTGGAGATTTTCGAC CTCTTTTCGATCCTCGCGAAAGAAAGTTGTTCATCTTTACTCGATGTCGA TCCTGGCCAGTGGTGGAAGAATTTTAGGGTGAAAACCCGGTAGTGGACAA TTGTAATCCCTTGAGGAAATGTTATAATCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig21:465659..469438-

>mRNA_P-littoralis_Contig21.121.2 ID=mRNA_P-littoralis_Contig21.121.2|Name=mRNA_P-littoralis_Contig21.121.2|organism=Pylaiella littoralis U1_48|type=CDS|length=984bp|location=Sequence derived from alignment at P-littoralis_Contig21:465659..469438- (Pylaiella littoralis U1_48)
ATGAGCCGCAAACAAAAGATGTTTGAGCTGTGCGACAAAGTACACAGAGA
TCTAAAGATGGCTGGGTTGCCCACCGATGGGTGTGCCACTGACGGCACCG
AGCACTCAAGCATAAGGGCAATGTGGTCCTCGGAGCTTGGTTTTGGGCCT
ACCGCCGCGCGACAACAACAGCGACAACAAGCGATTCCGGAAAGGGAGGT
GGAGGACGGAGGGGCACGAATAGAACACGAATCCGGTGGCAGTAATGTGG
GCCTTGCAACCAAACAGCCTGCTACTGCTGTTCCTGCTGCCGCTCCCGCT
ACAACCACCGGCGGCGGTGACGGAGCGGTGCGATGGTACGAGCGCGCATA
CGACTACTGGGAAGATGGCGAAAACTGTCCGCTCGACGACGACGGGGTTT
TGGGGGGCTACGGGCACATATCGCCCACCGACATCGCTGGTTCAGGGGCA
TTTCTGGACGAGCTCCGGAGTGTGAGACCCCTCCTTGGCGACTCGAACGC
GGCAGATTGCGGTGCCGGCATTGGCCGGGTAACAAAGCACTTACTGCTCG
GCAGATTCGACACGGTCGATATTGTGGAACAGAGCCCGCGATTGATCCAA
GCAGCCCCCAAGTACATTGGCCGAGATCGAGATCGCACCACTTGCGTGTG
TTTGGGGCTTCAGGATTTTTTCCCGGAGGAGGAAACCTACGACCTCATCT
GGATCCAGTGGGTCGTGGGACACTTCACAGACGTCGATTTCCTCAAGCTC
ATCAACCGCTGCCGCGCGGCCCTCCGAAAGGACGGTCTCGTCGTGATCAA
GGACAACGTCGTAGGGGAGGGAGAGGGAGCGTTCAAGGTGGACAGCGAGG
ACAGCAGTCTCACACGATCACTGGGCTACTTCCGGAGTCTTTTCAACCAC
GGGGGGGTGAAGGTAGTGCACCAGGCGCGGCAGGACGGGTTCCCCGGAGA
GCTGTTCCCGGTTTACATGTTTGCGCTTGAGTAA
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