prot_P-littoralis_Contig21.21.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig21.21.2
Unique Nameprot_P-littoralis_Contig21.21.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length265
Homology
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BLAST of mRNA_P-littoralis_Contig21.21.2 vs. uniprot
Match: A0A6H5JFD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD8_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 8.200e-35
Identity = 114/196 (58.16%), Postives = 123/196 (62.76%), Query Frame = 0 
Query:    1 MGMNSQYQQPXXXXXXXXXXXXXXXXXXQTPFDHGAYQQYDQSGFPQQQXXXXXXPVQWQP-------------QSMSAPGPFGDAAPNFSAAPN-AGGEMDFMGG-FPQP-----GQQXXXXGAGARAAGGGPAEETCTDLAKVCADPWDAARAGMVNVDDITDTKHLPAVEVKPFTDDHRPLADLVREAPPKVK 176
            MGMN Q+QQ      XXXXXXXXX    QTPFD G YQQYDQSGFP  Q XXXXX                    +M A GPF   +  FS AP  AGG +DF GG F QP        XXXX      + G PA  TCT L+K   DPWD AR+GMVN+DDITDTKHLPAVEVKPFTDDHRPLADLVREAPPKV+
Sbjct:  372 MGMNPQFQQQPQHQPXXXXXXXXXQY--QTPFDDGVYQQYDQSGFPLPQQXXXXXXXXXXXXXXXXXXXXXXXXHAMPATGPFDAPSVGFSGAPGTAGGGVDFAGGGFLQPTXXXXXXXXXXXXXXXXXSDGSPAV-TCTTLSKASTDPWDMARSGMVNIDDITDTKHLPAVEVKPFTDDHRPLADLVREAPPKVR 564
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig21.21.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFD8_9PHAE8.200e-3558.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig21contigP-littoralis_Contig21:106589..111954 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig21.21.2mRNA_P-littoralis_Contig21.21.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig21 106585..114105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig21.21.2 ID=prot_P-littoralis_Contig21.21.2|Name=mRNA_P-littoralis_Contig21.21.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=265bp
MGMNSQYQQPQQHQHHQHHQQYQQQQQHQTPFDHGAYQQYDQSGFPQQQQ
QQQQQPVQWQPQSMSAPGPFGDAAPNFSAAPNAGGEMDFMGGFPQPGQQQ
QQQGAGARAAGGGPAEETCTDLAKVCADPWDAARAGMVNVDDITDTKHLP
AVEVKPFTDDHRPLADLVREAPPKVKNAVMIDRPEPPPTHMAVAVLPIQA
PGQQRQQHQPHQQMGYGQGGYPQQQENSNNPFAQLQLTQFGQPAQPQPVL
FSANSSDPFHRYRV*
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