prot_P-littoralis_Contig209.71.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig209.71.2
Unique Nameprot_P-littoralis_Contig209.71.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length139
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig209.71.2 vs. uniprot
Match: D8LSL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSL7_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 3.780e-37
Identity = 74/113 (65.49%), Postives = 79/113 (69.91%), Query Frame = 0 
Query:   28 MVRLVEGHIVADDEGGDSTDGLLSGLLRCRGGTTINFLGFRVPLYWSCVAAVFALLRFGAPGLLFVAVVAGASHFACRDDGSGESSGGR--RPFARGSNIRGIGDLPRPPPSS 138
            MVRLVEG IVA+DE  D   G L GLLRCR   TINFLGFRVPLYWSCV  VFA L+FG  GLLFVA  AGAS +AC              RPFARGSN+RGI DLP+PPPSS
Sbjct:    1 MVRLVEGQIVAEDE--DGAGGWLRGLLRCR---TINFLGFRVPLYWSCVIVVFAGLKFGIFGLLFVAAAAGASQYACNXXXXXXXXXXXXXRPFARGSNVRGISDLPKPPPSS 108
[Close]
BLAST of mRNA_P-littoralis_Contig209.71.2 vs. uniprot
Match: A0A7S2A9X7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9X7_TRICV)

HSP 1 Score: 52.4 bits (124), Expect = 4.460e-6
Identity = 35/104 (33.65%), Postives = 49/104 (47.12%), Query Frame = 0 
Query:   33 EGHIVADDEGGDSTDGLLSGLLRCRGGTTINFLGFRVPLYWSCVAAVFALLRFGAPGLLFVAVVAGASHFACRDDGSGESSGGRRPFARGSNIRGIGDLPRPPP 136
            +G ++++ E   +  G   GLL  R G  ++  GF +      V  V A L  G  GLL      GA     R   S +  GG    + G+NIRG+ DLP+PPP
Sbjct:   10 DGTLISEGEESAAPPG---GLLSLRSGQNVDAFGFNLEPRQFVVVLVLAALMLGGTGLLAFVFSLGAYSLFRRVASSEDGRGGGEHRSAGANIRGVKDLPKPPP 110
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig209.71.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSL7_ECTSI3.780e-3765.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2A9X7_TRICV4.460e-633.65Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig209contigP-littoralis_Contig209:382678..389949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig209.71.2mRNA_P-littoralis_Contig209.71.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig209 382678..389949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig209.71.2 ID=prot_P-littoralis_Contig209.71.2|Name=mRNA_P-littoralis_Contig209.71.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=139bp
MWALVQHRSTGPFTLLVLIAPQQFLTAMVRLVEGHIVADDEGGDSTDGLL
SGLLRCRGGTTINFLGFRVPLYWSCVAAVFALLRFGAPGLLFVAVVAGAS
HFACRDDGSGESSGGRRPFARGSNIRGIGDLPRPPPSS*
back to top