prot_P-littoralis_Contig209.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig209.42.1
Unique Nameprot_P-littoralis_Contig209.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length394
Homology
BLAST of mRNA_P-littoralis_Contig209.42.1 vs. uniprot
Match: D8LSM3_ECTSI (Co-chaperone grpE family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM3_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 3.270e-90
Identity = 182/293 (62.12%), Postives = 209/293 (71.33%), Query Frame = 0
Query:   65 ARRTGGTR--SPTIAPTAGAKQRVGVATILMMAADPAEEAAKNVAEAASAADEP----SIPEGEEVVXXXXXXXXXXXXXXXXXXXXGEAQTEVVVXXXXXXXXXXXXX-----VDPMAEVRQQIEDLEKELILEENKLRDAEDSVDKRGQTGFLMMAAKVDNFRKASGAGTGDFEADAKSAVLRGILPAFEPFEAAAEVLKTETENEVKFDKSYQALYRQLKDVYTKCGATDFFGVVGEDFVYARHEKVSEEHNPIMKEGKIIKCVSPGVELKKNVIRKAACVVSLGPEKVE 346
            A+RT GT   SP    T+G ++R GV   LMMAA+P+E+   +VAEA           SI EGEE V                    G+ +TEVV          XXXX     VDPMAEV+QQI+DLEKEL+ EEN+LRD +DSV ++GQ GFL MAA+VDNFRK+SGAGTGD+EADAK+AVLR +LPAFEPFEAA E L   TE EVK++KSYQALYRQLKDV+TK GATDFFGVVGE FVY RHEK SEEHNP+MKEG IIKCVSPG+ELKKNVIRKA CVVSLGPEK E
Sbjct:   13 AQRTRGTPLLSPGALRTSGYRER-GVH--LMMAAEPSED---SVAEAXXXXXXXXXXXSISEGEEAVEDEASGG-------------GDVETEVVAEEGEGKEGEXXXXXXXXXVDPMAEVKQQIKDLEKELMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLATETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEKEE 286          
BLAST of mRNA_P-littoralis_Contig209.42.1 vs. uniprot
Match: A0A6H5KMN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN5_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 1.300e-79
Identity = 127/159 (79.87%), Postives = 142/159 (89.31%), Query Frame = 0
Query:  188 EENKLRDAEDSVDKRGQTGFLMMAAKVDNFRKASGAGTGDFEADAKSAVLRGILPAFEPFEAAAEVLKTETENEVKFDKSYQALYRQLKDVYTKCGATDFFGVVGEDFVYARHEKVSEEHNPIMKEGKIIKCVSPGVELKKNVIRKAACVVSLGPEKVE 346
            EEN+LRD +DSV ++GQ GFL MAA+VDNFRK+SGAGTGD+EADAK+AVLR +LPAFEPFEAA E L  ETE EVK++KSYQALYRQLKDV+TK GATDFFGVVGE FVY RHEK SEE+NP+MKEG IIKCVSPG+ELKKNVIRKA CVVSLGPEK E
Sbjct:    3 EENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFTKVGATDFFGVVGEKFVYTRHEKASEEYNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEKKE 161          
BLAST of mRNA_P-littoralis_Contig209.42.1 vs. uniprot
Match: A0A835ZD01_9STRA (GrpE-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD01_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.590e-26
Identity = 67/132 (50.76%), Postives = 82/132 (62.12%), Query Frame = 0
Query:  216 NFRKASGAGTGDFEADAKSAVLRGILPAFEPFEAAAEV---LKTETENEVKFDKSYQALYRQLKDVYTKCGATDFFGVVGEDFVYARHEKVSEEHNPIMKEGKIIKCVSPGVELKKNVIRKAACVVSLGPEK 344
            N+RK         +A+A + VLR   P  E FEA  +    LK ETE E  F+ +YQALYRQL DVYTK G TDFFGV GE +   RHEKV E+H  I + G +++C++ G EL   VIRKA  V SLGPEK
Sbjct:   93 NYRKRRNLDQKKLQAEAMARVLRSFEPVLEAFEAVVDGETDLKLETEQEQMFNSNYQALYRQLADVYTKLGVTDFFGVQGETYDGIRHEKVGEQHADI-RAGAVLECLAKGNELSGGVIRKAKVVTSLGPEK 223          
BLAST of mRNA_P-littoralis_Contig209.42.1 vs. uniprot
Match: A0A7S2V060_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V060_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.120e-11
Identity = 55/198 (27.78%), Postives = 101/198 (51.01%), Query Frame = 0
Query:  169 DPMAEVRQQIEDLEKELILEENKLRDAEDSVDKRGQTGFLMMAAKVDNFRKASGAGTGDFEADAKSAVLRGILPAFEPFEA---AAEVLKTETENEVKFDKSYQALYRQLKDVYTKCGATDFFGVVGEDFVYARHEKVS--EEHNPIMKEGKIIKCVSPGVELKKNVIRKAACVVSL---GPEKVEELAAEGEEDGEE 358
            DP+AE++QQIE               ++  +   G+TG++ +AA+ DN++++S +        A + V+   +P  + FEA    AE  +  +E+ +K  ++YQAL RQ+  ++   GA+ F   VG      ++   S  E  N   K+G +++ +  G E+   +IR A+CV+ +    P   +++ AE +E  EE
Sbjct:   98 DPLAELKQQIEXXXXXXXXXXXXXXISKRKILDNGKTGYVTIAAEADNYKRSSKSTIDSLGTRAMAEVISDFMPLVDKFEAIKETAEATENLSEDVLKIHRNYQALPRQMMTIFEGLGASSFDATVGSQIDPIKNVASSTREPANDKEKDGMVVEALKSGFEINGVIIRPASCVMCVVPPPPAPQDDVQAESDEKAEE 295          
BLAST of mRNA_P-littoralis_Contig209.42.1 vs. uniprot
Match: A0A7S2LF94_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LF94_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.220e-11
Identity = 60/188 (31.91%), Postives = 102/188 (54.26%), Query Frame = 0
Query:  169 DP-MAEVRQQIEDLEKELILEENKLRDAEDSVDKRGQTGFLMMAAKVDNFRKASGAGTGDFEADAKSAVLRGILPAFEPFEAAAEVLKTETENEVKFDKSYQALYRQLKDVYT-KCGATDFFGVVGEDFVYARHEKVSEEHNPIMKEGKIIKCVSPGVELKKNVIRKAACVVSLGPEKVEEL-AAEGE 353
            DP M  ++++I  LE  L  +   L    D  +   +TG++   A++DN+RK S   + +    +++AV+R  LP  E      E+L+ + E       +Y+AL   L++V   K   +++   VG++F Y R+  V+EE +  + +G II+ +SPG+E+K NV+R A  + S G E  E+  AAE E
Sbjct:  105 DPEMVALKEEISKLEATLRSKRAALSGVLDEAELYTETGYMRTLAEMDNYRKRSEISSQNNRYSSRAAVVRQFLPILEEL----EMLERQYEG-----SAYKALRWDLQNVLQEKLDMSEYHAEVGDEFSYIRYNAVAEEFSEEVAKGCIIRQISPGLEIKGNVLRAADVIKSKGSEAAEQSEAAEAE 283          
BLAST of mRNA_P-littoralis_Contig209.42.1 vs. uniprot
Match: A0A7S1T8I4_9CHLO (GrpE protein homolog n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T8I4_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 1.950e-9
Identity = 48/157 (30.57%), Postives = 77/157 (49.04%), Query Frame = 0
Query:  184 ELILEENKLRDAEDSVDKRGQTGFLMMAAKVDNFRKASGAGTGDFEADAKSAVLRGILPAFEPFEAAAEVLKTETENEVKFDKSYQALYRQLKDVYTKCGATDFFGVVGEDFVYARHEKVSEEHNPIMKEGKIIKCVSPGVELKKNVIRKAACVVSL 340
            E + E N     ++S+    +  +L   A  +NFRK S           K  V+   LP  + FE A++ LK ETE E K D SYQA+YRQ+ +++   G T     VG+ F   +HE + +E +  +++G I+     G  L   ++R A   V++
Sbjct:  139 ESVNEVNAAVKLQESIALAAKEQYLRSTADFENFRKRSQIEKDALRDSVKGDVVSDFLPLVDNFELASKQLKLETEAEKKIDASYQAMYRQMVEIFKNLGVTAV-ETVGKPFDPEKHEAIMQEESTEVEDGLILDEFRRGFMLGSKLLRPAMVKVAI 294          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig209.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LSM3_ECTSI3.270e-9062.12Co-chaperone grpE family protein n=1 Tax=Ectocarpu... [more]
A0A6H5KMN5_9PHAE1.300e-7979.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZD01_9STRA2.590e-2650.76GrpE-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2V060_9STRA1.120e-1127.78Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2LF94_9STRA1.220e-1131.91Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1T8I4_9CHLO1.950e-930.57GrpE protein homolog n=2 Tax=Tetraselmis chuii Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 171..198
NoneNo IPR availableCOILSCoilCoilcoord: 147..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..393
NoneNo IPR availablePANTHERPTHR21237:SF4GRPE PROTEIN HOMOLOGcoord: 96..354
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 160..339
e-value: 5.3E-16
score: 58.7
IPR000740GrpE nucleotide exchange factorPANTHERPTHR21237GRPE PROTEINcoord: 96..354
IPR009012GrpE nucleotide exchange factor, headGENE3D2.30.22.10Head domain of nucleotide exchange factor GrpEcoord: 286..339
e-value: 2.3E-5
score: 26.3
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 204..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig209contigP-littoralis_Contig209:251202..259899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig209.42.1mRNA_P-littoralis_Contig209.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig209 250173..259950 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig209.42.1 ID=prot_P-littoralis_Contig209.42.1|Name=mRNA_P-littoralis_Contig209.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=394bp
MTGVALASRMLVTTAALPLLFFSASQCSTAFVLRTASLCSSRTQRSVQER
RWSSATATATATALARRTGGTRSPTIAPTAGAKQRVGVATILMMAADPAE
EAAKNVAEAASAADEPSIPEGEEVVAAAPEEEEEDAGLMEEEDEDGEAQT
EVVVEGEEEAKEQEEEEVDPMAEVRQQIEDLEKELILEENKLRDAEDSVD
KRGQTGFLMMAAKVDNFRKASGAGTGDFEADAKSAVLRGILPAFEPFEAA
AEVLKTETENEVKFDKSYQALYRQLKDVYTKCGATDFFGVVGEDFVYARH
EKVSEEHNPIMKEGKIIKCVSPGVELKKNVIRKAACVVSLGPEKVEELAA
EGEEDGEETPAAAAAAAPEGQEATQEEEAAAEEKPAAEEDAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000740GrpE
IPR009012GrpE_head
IPR013805GrpE_coiled_coil