mRNA_P-littoralis_Contig209.38.16 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig209.38.16 vs. uniprot
Match: A0A6H5KJQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ3_9PHAE) HSP 1 Score: 672 bits (1735), Expect = 4.340e-214 Identity = 768/1437 (53.44%), Postives = 864/1437 (60.13%), Query Frame = 1
Query: 256 MAEPDAEALRTELAKVKDKAKAYISKLNEEKAALAKELNDKSTVXXXXXXXXXXXXXXXXXXXXXXXXXXQEQVTDRDGRLLRAKELLQAKLASKDEELEAAQAEAKTLREQAQSAA---------------------EVAAAAQAAXXXXXXXXXXXXXXXXXXXXXXXXSRMDAEKLLAETKQASEATSESLAVVQEERDNAYTRVESLEIALEEAKQEAGDNASAGSXXXXXXXXXXXXXXXXXXXAMRERETELEEVRREAASALEQEXXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGADMAAAESIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEELRSSMLTENSKAAAKDDEGE---------SDAKSKAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEALVSQIACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATANGESTGINDDHSPAVNQGSGTSSEPPQXXXXXXXXXXXXXXXXXXXXXXXXXXAEVKAKQETDALARRVAALEEELAESKLALHQAEEAAAEXXXXXXXXXXXXXXXXXXXXXXXXXEKEEEIEAVRERLRAAEQKSEELSSELASEKEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGALGXXXXXXXXXXXXXXXXXXXXXXRLMGALEEREDRXXXXXXXXKRVERLQEE------------------------LAEAEGSAGEWARKVKAAEDKREAAE------------------------------------------------------------AGAVEAVKALEDALTQQREQEAERLTKEVGSLRKEASLAKAELEARGEALRQAKLDLASVVEDSAAADKRAAEARSMLEEARAEHGETKMKLQSEAAANAGLKAAVMEANETVAKRVDVLRDAIEKVELERDAAAAEASSAKTQLQALQAQVASLLRENAGAKTEAGLKVGDLQQRLSAAQDELTREREIATERQREMQAYSDAMAKEGEALRAATREAQAVAAKASAAESEAVSAVERLRQQGEAATSNXRQAMEVQXXXXXXXXAALEERNAALESETLRLRHLMTRETGERQEQALGLEQSLVSKIEEANLHKKKRLAARSEMISLAKTLDAERDGRKAVEHALQYALVPKAIDQSTALERVVMTSERAVHKLSRAGGVRLATNLQQAAHASLLRLRGRVAGADDPSVAWHQQQSSDISRLALMGXXXXXXXXXXXXXXXXPEDANSSVISDRMDSPLGSAASGDQGGGPGFWRGSSRLGNQAAKDSIYLERVRRLESEMERVSAGLALVSQSVEQLSELVEVQASLCGGISVLCCASRRTSGNTARRVGRGTGGG------PAYSTLEMGSQRL------ESAGGTPVQG-LGRSGR 4185
MAEPDA ALR ELA VKDKAKAYISKLNEEKAALAKEL DKS V XXXXXXXXXXXXXXXXXXXXXXXX++QV DRDGRLLRA+ELLQAKLA+KDEEL+AAQAEAKTLR+QA+SAA E A +AA SR + E LLAETKQA+ ERD+A R E+L+ +LE +XXXXXXXXXXXXXXXXXXX + E +R E A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ES +EELRS + S+AA ++ G+ S AK+ AE EAL +Q+ ATA + T G+G+S+E XXXXXXXXXX K+E DAL RVAALEEELA SKLALH XXXXXXXXXXXXX EE+EA+R RLR AEQ++ +LS+EL+S K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXX K E +E L +++ A E + ++ A ++R AGAVEAVKALEDALTQ REQEAERLT+EV LRKE SL KAELEARGEALRQAKLDLASV+EDS A + +EARS GLK AV+E NETV+KRVDVLRDAIEKVE ERDAAAA+ +++KTQLQALQAQVASLL+ENAGAKTEAGL+VGDLQQRL+AAQDEL RE+E ER++EMQAY++AMA+EGE LR AT+EAQA+AA+A+AAESE+ S V +R++GEA S+ RQA+E Q AALEERNAALESET RL+HLM ETGER+E+A GLEQSLV+KIEEANLHKKKRL ARS MISL KTL+AERDG KAV HALQY LVPKAIDQ+T LERVVMT+E +VH+LSRAGGVRLATNLQ AA +SL RLRGRVAGAD+P VAWHQ+QSSD+SR+ALMG PEDANSSVISDR+DSP GSAASGDQGGGPGFWRGSSRLGNQ KDSIYLERVRRLESEMERVS+GLALVSQSVEQLSELVEVQASLCGG+SVLCC+SR PAYSTLEMGS+RL ES TPV L R G+
Sbjct: 1 MAEPDAAALRKELAMVKDKAKAYISKLNEEKAALAKELQDKSNVLAXXXXXXXXXXXXXXXXXXXXXXXXEDQVKDRDGRLLRAEELLQAKLAAKDEELQAAQAEAKTLRDQAESAAXXXGHXPQANRGSXGADSPSEEAVAXXRAAAEEEMKSLKGELQRVSEALEACEASRTETETLLAETKQAAAXXXXXXXXAARERDDALARAETLQASLE-------------AXXXXXXXXXXXXXXXXXXXXXXXXXSTAEGLRAELAXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQEST-----------------------------IEELRSKLA--ESEAAEMEESGDKAEXXXXALSQAKAGRAEAESEAARRE-------------------------EALRAQVV---------GMEAEVASLREELRVAEEEKEIAAAAATAAEKDT-----------DGTGSSAERSCAASGELPVAAVDSTDGXXXXXXXXXXXXXDTKEEVDALVGRVAALEEELAASKLALHX-------------------XXXXXXXXXXXXXXXXEEMEAIRGRLRVAEQETADLSAELSSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAAKDQETAEEAXXXXXXXXXXXXXXXXXXRETEKALEDSDKQAEELSSRLMGALEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVEAVKALEDALTQ-REQEAERLTEEVAGLRKETSLVKAELEARGEALRQAKLDLASVLEDSTATGAKLSEARSSXXXXXXXXXXXXXXXXXXXXXXXGLKXAVIETNETVSKRVDVLRDAIEKVEAERDAAAADVAASKTQLQALQAQVASLLKENAGAKTEAGLRVGDLQQRLAAAQDELGREKEAIAERKKEMQAYAEAMAREGETLRTATKEAQAIAARATAAESESKSIVALVRREGEATASSLRQALEKQAAEASRAVAALEERNAALESETSRLQHLMMTETGEREEKAQGLEQSLVTKIEEANLHKKKRLEARSMMISLDKTLEAERDGHKAVGHALQYKLVPKAIDQATVLERVVMTAELSVHRLSRAGGVRLATNLQ-AAQSSLARLRGRVAGADEPPVAWHQRQSSDLSRVALMGGSGGASSMIGGG----PEDANSSVISDRLDSPSGSAASGDQGGGPGFWRGSSRLGNQTPKDSIYLERVRRLESEMERVSSGLALVSQSVEQLSELVEVQASLCGGLSVLCCSSRXXXXXXXXXXXXXXXXXXXXXXXPAYSTLEMGSRRLVEGGESESDAATPVSDDLSRPGK 1316
BLAST of mRNA_P-littoralis_Contig209.38.16 vs. uniprot
Match: D8LSM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM5_ECTSI) HSP 1 Score: 604 bits (1557), Expect = 3.990e-188 Identity = 414/674 (61.42%), Postives = 459/674 (68.10%), Query Frame = 1
Query: 2257 RLMGALEEREDRXXXXXXXXKRVERLQEELAEAEG------------------SAGEWARKVKAAEDKREAAEAGAVEAVKALEDALTQQREQEAERLTKEVGSLRKEASLAKAELEARGEALRQAKLDLASVVEDSAAADKRAAEARSMLEEARAEHGETKMKLQSEAAANAGLKAAVMEANETVAKRVDVLRDAIEKVELERDAAAAEASSAKTQLQALQAQVASLLRENAGAKTEAGLKVGDLQQRLSAAQDELTREREIATERQREMQAYSDAMAKEGEALRAATREAQAVAAKASAAESEAVSAVERLRQQGEAATSNXRQAMEVQXXXXXXXXAALEERNAALESETLRLRHLMTRETGERQEQALGLEQSLVSKIEEANLHKKKRLAARSEMISLAKTLDAERDGRKAVEHALQYALVPKAIDQSTALERVVMTSERAVHKLSRAGGVRLATNLQQAAHASLLRLRGRVAGADDPSVAWHQQQSSDISRLALMGXXXXXXXXXXXXXXXXPEDANSSVISDRMDSPLGSAASGDQGGGPGFWRGSSRLGNQAAKDSIYLERVRRLESEMERVSAGLALVSQSVEQLSELVEVQASLCGGISVLCCASRRTS-GNTA-----RRVGRGTGGGPAYSTLEMGSQRL------ESAGGTPVQ-GLGRSGR 4185
RLMGALEERE+ K RL+EELA A G SA WA +VK E+K EAAEAGAVEAVKALEDALTQ REQEAERLT+E LRKE SL KAELEARGEALRQAKLDLASV+ RDAAAA+ +S+KTQLQALQAQVASLL+ENAGAKTEAGL+VGDLQQRL+AAQDEL RERE ER++EMQAY+ +AA+A+AAESE+ S V +R+ GEAA S+ RQA+E Q AALEERNAALESETLRLRHLM ETGER+E+A GLEQSLV+KIEEANLHKKKRL ARS MISL KTL+AERDG KAV HALQY LVPKAIDQ+T LERVVMT+E +VH+LSRAGGVRLATNLQ AA +SL RLRGRVAGAD+P VAWHQQQSSD+SR+ALMG PEDA+SSVISDR+DSP GSAASGDQGGGPGFWRGSSRLGNQ KDSIYLERVRRLESEMERVS+GLALVSQSVEQLSELVEVQASLCGG+SVLCC+SRR G TA RR+ GPAYSTLEMGS+RL ES TP+ LG+ G+
Sbjct: 653 RLMGALEEREEGRRREAAVAKEAGRLREELAGATGELERARAEVKGRDAAADESASVWASRVKELEEKMEAAEAGAVEAVKALEDALTQ-REQEAERLTEEAAGLRKETSLVKAELEARGEALRQAKLDLASVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDAAAADVASSKTQLQALQAQVASLLKENAGAKTEAGLRVGDLQQRLTAAQDELGREREAIAERKKEMQAYAXXXXXXXXXXXXXXXXXXXIAARATAAESESKSCVALVRRDGEAAASSLRQALEKQAAEASRTVAALEERNAALESETLRLRHLMMTETGEREEKAQGLEQSLVTKIEEANLHKKKRLEARSMMISLDKTLEAERDGHKAVGHALQYKLVPKAIDQATVLERVVMTAELSVHRLSRAGGVRLATNLQ-AAQSSLARLRGRVAGADEPPVAWHQQQSSDLSRVALMGGSGSGSGMIGGA----PEDASSSVISDRLDSPSGSAASGDQGGGPGFWRGSSRLGNQTPKDSIYLERVRRLESEMERVSSGLALVSQSVEQLSELVEVQASLCGGLSVLCCSSRRVGVGATATTSGGRRIRAXXXXGPAYSTLEMGSRRLVEGGESESDAATPMSDNLGQPGK 1320 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig209.38.16 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig209.38.16 >prot_P-littoralis_Contig209.38.16 ID=prot_P-littoralis_Contig209.38.16|Name=mRNA_P-littoralis_Contig209.38.16|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1323bp MAEPDAEALRTELAKVKDKAKAYISKLNEEKAALAKELNDKSTVLAGVKDback to top mRNA from alignment at P-littoralis_Contig209:223069..244859- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig209.38.16 ID=mRNA_P-littoralis_Contig209.38.16|Name=mRNA_P-littoralis_Contig209.38.16|organism=Pylaiella littoralis U1_48|type=mRNA|length=21791bp|location=Sequence derived from alignment at P-littoralis_Contig209:223069..244859- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig209:223069..244859- >mRNA_P-littoralis_Contig209.38.16 ID=mRNA_P-littoralis_Contig209.38.16|Name=mRNA_P-littoralis_Contig209.38.16|organism=Pylaiella littoralis U1_48|type=CDS|length=3969bp|location=Sequence derived from alignment at P-littoralis_Contig209:223069..244859- (Pylaiella littoralis U1_48)back to top |