mRNA_P-littoralis_Contig209.33.3 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig209.33.3 vs. uniprot
Match: D8LSM6_ECTSI (GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSM6_ECTSI) HSP 1 Score: 1071 bits (2771), Expect = 0.000e+0 Identity = 564/664 (84.94%), Postives = 599/664 (90.21%), Query Frame = 3
Query: 270 RSRRRRSKAACHVLAAVAVAVVAAAGVTTPLTAEAWVAPLPHHAATRSPQATATSSRAWSTSSRHNRCEVQQRXXXXXXXXXGCEIRQLSGRG-AGVRRSEVSCRSQAVDGASSTAEYKPMEEGDEVLIDFDENDFEEGEDFFSVEGEDEEDTDQVEDEH-DISSDPVQVIGVEEAMDRVRELKKLGPPVPVKGERARSKRRVPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDIVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGMAGCNILDQEIARFLRQQKVPVILAVNKCESQKFGEIQTADFWCLGLGEPWPISGLHGDGIYDMMDNVKDHLYDVDQSAELEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACIVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKKLRRMEQDSRKNPKPYSDK 2255
RSR + S+AAC +L A AVA V T PLTAEAWV+ HAA RS + T SS H+RC+VQ++ E QLSGRG +G RR VSCRSQAVD ASST E+KPMEEGDEVLIDFDE++F+E EDFF+VEGE+E D D +S PVQVIGVEEAMDRVRELKKLGPPVPVKGERARSKRR PVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFD+VDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDG+ GCN+LDQEIARFLRQQKVPV+LAVNKCESQK+GEIQTA+FWCLGLGEPWPISGLHGDGIYDMMDNV +HLY+VD++AE EDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADR+QSDGRAC+VVCNKWDLVEDK+D+SYNKAV+YARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGK+LRRMEQD+R+NPKPYSDK
Sbjct: 30 RSRLQGSRAACSLLTAAAVAAV-----TAPLTAEAWVS----HAAARSSRQAQTLGWTSRGSSGHHRCQVQRQRGSGGGSR---ESSQLSGRGVSGRRRRVVSCRSQAVDEASST-EHKPMEEGDEVLIDFDESEFDESEDFFAVEGEEEGDXXXXXXXXXDSTSGPVQVIGVEEAMDRVRELKKLGPPVPVKGERARSKRRFPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDVVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGIVGCNVLDQEIARFLRQQKVPVVLAVNKCESQKYGEIQTAEFWCLGLGEPWPISGLHGDGIYDMMDNVAEHLYEVDENAEEEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRIQSDGRACVVVCNKWDLVEDKDDSSYNKAVEYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKRLRRMEQDNRRNPKPYSDK 680
BLAST of mRNA_P-littoralis_Contig209.33.3 vs. uniprot
Match: W7TQC4_9STRA (GTPase Der n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQC4_9STRA) HSP 1 Score: 570 bits (1470), Expect = 9.660e-191 Identity = 278/463 (60.04%), Postives = 366/463 (79.05%), Query Frame = 3
Query: 867 RVPVVAVIGRPNVGKSTVVNRLAKRF--KDGSIVFDESGVTRDRTYKRAWYCGKDFDIVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGMAGCNILDQEIARFLRQQK-VPVILAVNKCESQKFGEIQTADFWCLGLGEPWPISGLHGDGIYDMMDNVKDHLYDVDQSAELEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACIVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKKLRRMEQDSRKNPKPY 2246
++PV+AVIGRPNVGKST+VNRL + + +IV+D GVTRDR Y++A + G+ F++VDTGGL+FD+ ++FA +IR+QAL+ALEE+ A I+VVDG G LD+E+A+FLR QK P+ +AVNKCE+ GE + FW LGLGEP+P+SGLHG G+ +M++ + H+Y+V++ AE E+ I VAIVGRPNVGKSSLLNRL+G+ R+IVSDV GTTRD++DA+ E G++YR +DTAGIRR+ KV+YGNEF MVNRA KA+RRADVVLL+VDV GI DQD++LA R+ DGRAC++V NKWD VE K+D ++N+AV Y ++ L V WA+V FTSA TGQRC K+FD +D+ + HR+RVKTS+LNEVL +A++WQ PP+ KSS QG++YYCNQ+AT PP+V VFCNNPKLF D+YKRYLDRKFRE L L TPIR+ +RGKKLR++ + +P PY
Sbjct: 222 KLPVLAVIGRPNVGKSTIVNRLCRTMSTEPDAIVYDYEGVTRDRIYRKAEWNGRVFEVVDTGGLIFDEDQDNLFAPQIREQALLALEESVAAILVVDGQVGVTTLDEEVAKFLRLQKNKPIFVAVNKCETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEE-AEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKKVEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVE-KDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSS--QQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQG--SPVPY 678
BLAST of mRNA_P-littoralis_Contig209.33.3 vs. uniprot
Match: B7FRD0_PHATC (GTPase Der n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRD0_PHATC) HSP 1 Score: 545 bits (1405), Expect = 6.850e-183 Identity = 278/508 (54.72%), Postives = 372/508 (73.23%), Query Frame = 3
Query: 771 VIGVEEAMDRVRELKKLGP----PVPVKGERARSKRRVPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDIVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGMAGCNILDQEIARFLRQQ-KVPVILAVNKCESQKFGEIQTADFWCLGLGEPWPISGLHGDGIYDMMDNVKDHLYDVDQSAELEDN---INVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERG--------GRTYRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACIVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKKLRRMEQDSRKNPKP 2243
VIG+ +DRV E + P P R R ++ P++A++GRPNVGKS +VNR+A G+IV DESG+TRDRTY+ A + G+ F IVDTGGLVFDD +FAKEIR+QA++A+EE+ AVIMVVDG G +D IA FLR++ +PV +AVNKCES+K G + ADFW LGLGEP+P+S LHG G ++M+ + D + + ++ + ED IN+AI+GRPNVGKSSLLN +FG+TR+IVS++ GTTRDSIDA+ ER YR VDTAGIRRKGKVD+G EFFMVNRA +AIRRADVVLL++D +G+ +QDRVLA ++ DGRAC++VCNKWD V DK+ +Y+K+V Y R+ L ++WA + F SA TGQR K++ +D HR+R+ T++LNEVLRDA+LWQ PP++++ SQ KIYYCNQ++TRPPTV VFCN+PKL DNY+RYLDRKFRE L G ++TPIR+++RG+++R + ++ N P
Sbjct: 32 VIGLLATLDRVNEKSTVEPSSGDPQLQPIRRLRQNKKEPLIAIVGRPNVGKSALVNRIAGSQSGGAIVADESGITRDRTYRPAEFLGERFMIVDTGGLVFDDDESTLFAKEIREQAMVAIEESAAVIMVVDGQTGLTGMDLMIAEFLRKEVDIPVHVAVNKCESEKTGAMSAADFWGLGLGEPFPVSALHGVGTAEIMETIFDSIAEK-KTFDAEDRPEEINIAIIGRPNVGKSSLLNSIFGDTRAIVSEMAGTTRDSIDAVMERPPPPGSDDLSTIYRFVDTAGIRRKGKVDFGPEFFMVNRALRAIRRADVVLLILDATSGVAEQDRVLAQKIADDGRACVIVCNKWDAVVDKDSTTYDKSVQYFREELPMIRWAPILFISAATGQRVGKIYSAIDGAIEAHRKRISTAILNEVLRDAILWQPPPTRRNG--SQAKIYYCNQVSTRPPTVVVFCNDPKLVNDNYRRYLDRKFRESLDGFEATPIRWIFRGRRVRDVMRNRSMNGDP 536
BLAST of mRNA_P-littoralis_Contig209.33.3 vs. uniprot
Match: A0A7S1FMA9_9STRA (GTPase Der n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMA9_9STRA) HSP 1 Score: 535 bits (1377), Expect = 9.780e-178 Identity = 273/503 (54.27%), Postives = 356/503 (70.78%), Query Frame = 3
Query: 861 KRRVPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDIVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGMAGCNILDQEIARFLRQQ-KVPVILAVNKCESQKFGEIQTADFWCLGLGEPWPISGLHGDGIYDMMDNV----------------------------------------KDHLYDVDQSAELEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFER---GGRT----YRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACIVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKKLRRMEQD 2222
K ++P++AVIGRPNVGKS +VNR+A GSIV DESG+TRDRTY+ + G+DF +VDTGGLVFDD +FA EIRQQA++A+ E+ A ++VVDG+ GC +D +A FLR++ +PV +AVNKCES+K G + ADFW LGLGEP+P+S +HG G ++++ + KD L + D ++ IN+AIVGRPNVGKSSLLN+LFG+ R+IVS++ GTTRDSIDA+ ER G T YR VDTAGIRRK KVD+G EFFMVNRA +AIRR+DVVLL++D AGI +QDRVLA ++ DGRACI+VCNKWD V +K++++Y K+V Y R L V+W+ + F SA TGQRC K++DLVD HR+RV TSVLNE+LRDA+ WQ PPS++S +Q KIYYCNQ++ RPPT+ VF N+PKL DNYKRYLDRKFRE L G +STPIR+L+RG+++R + +D
Sbjct: 93 KSKMPILAVIGRPNVGKSALVNRIAGTQSGGSIVADESGITRDRTYRSGNFLGRDFQLVDTGGLVFDDDEDTLFASEIRQQAMVAIGESVAAVLVVDGLVGCTSMDLALAEFLRKEVNIPVHVAVNKCESEKSGGLNAADFWQLGLGEPFPVSAIHGVGTAELLERLFESVPQLAASEDEVEDEELLAQFSYLGDVMKKNRREIQKEKDALRNRDDDDLTQEEINIAIVGRPNVGKSSLLNKLFGDQRAIVSEMAGTTRDSIDALMERPSPDGITPAVQYRFVDTAGIRRKNKVDFGPEFFMVNRALRAIRRSDVVLLILDATAGIAEQDRVLAQKIADDGRACIIVCNKWDAVVNKDNSTYEKSVKYFRMELPMVRWSPILFISAVTGQRCKKIYDLVDAAVSAHRKRVPTSVLNEILRDAIAWQPPPSRRSG--AQAKIYYCNQVSVRPPTIVVFVNDPKLVSDNYKRYLDRKFRESLDGFESTPIRWLFRGRRVRDVLRD 593
BLAST of mRNA_P-littoralis_Contig209.33.3 vs. uniprot
Match: A0A1Z5K803_FISSO (GTPase Der n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K803_FISSO) HSP 1 Score: 533 bits (1373), Expect = 2.530e-177 Identity = 270/524 (51.53%), Postives = 361/524 (68.89%), Query Frame = 3
Query: 849 RARSKRRVPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDIVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGMAGCNILDQEIARFLRQQKV---PVILAVNKCESQKFGEIQTADFWCLGLGEPWPISGLHGDGIYDMMDNVKDHL------------------------------------------YDVDQSA-----------------ELEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGG--------RTYRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACIVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKKLR 2207
RAR ++VP++A++GRPNVGKS +VNR+A G+IV DESG+TRDRTY+ A + G+ F +VDTGGLVFDD +FAKEIR+QA+IA+EE+ AVI+V DG AG + +D IA FLR++ V PV++AVNKCES+K G + ++FW LGLGEP+P+S LHG G D+++++ + + Y + +A E ++ INVAI+GRPNVGKSSLLN +FG TR+IVSD+ GTTRDSIDA+ ER YR VDTAGIRRKGKVD+G EFFMVNRA +AIRRADVVLL++D AG+T+QDR+LA ++ DGRAC ++CNKWD V DK+ +Y+KAV Y R+ L ++WA + F SA TGQR K++ ++DE HR+R+ TS+LNEVLRDA+LWQ PP++++ SQ +IYYCNQ++TRPPT+ VFCN+PKL DNY+RYLDRKFRE L G ++TPIR+++RG++ R
Sbjct: 55 RARKNKKVPLIAIVGRPNVGKSALVNRIAGSQSGGAIVADESGITRDRTYRPAEFLGEHFSVVDTGGLVFDDDENTLFAKEIREQAMIAIEESAAVILVADGQAGLSPMDVAIAEFLRKEVVKDIPVLMAVNKCESEKTGAMAASEFWQLGLGEPFPVSALHGVGTADLLESMFEQIAQKKTAIDGFGTKVKKLQEAKAIMKHKGPLPGEDETSYKMRKYGIGDAAQNALDAYEDALAAFDELEQQEEINVAIIGRPNVGKSSLLNAIFGGTRAIVSDLAGTTRDSIDAVMERPAPPGSDEQPTLYRFVDTAGIRRKGKVDFGPEFFMVNRALRAIRRADVVLLILDATAGVTEQDRILAQKISDDGRACAIICNKWDAVVDKDSLTYDKAVKYVREELPQIRWAPILFISAATGQRVGKIYGVIDEAIAAHRKRISTSILNEVLRDAILWQPPPARRNG--SQARIYYCNQVSTRPPTIVVFCNDPKLVNDNYRRYLDRKFRESLDGFEATPIRWIFRGRRER 576
BLAST of mRNA_P-littoralis_Contig209.33.3 vs. uniprot
Match: B8BTK0_THAPS (GTPase Der (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTK0_THAPS) HSP 1 Score: 523 bits (1347), Expect = 1.550e-175 Identity = 260/457 (56.89%), Postives = 344/457 (75.27%), Query Frame = 3
Query: 873 PVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDIVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGMAGCNILDQEIARFLRQQ---KVPVILAVNKCESQKFGEIQTADFWCLGLGEPWPISGLHGDGIYDMMDNVKDHLYD-VDQSAELEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRT-------YRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACIVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKKLR 2207
P++AV+GRPNVGKS +VNRLA G+IV DE G+TRDRTY+ A + G+ F +VDTGGLVFDD +FAKEIR+QA+IA+EE+ VI+VVDG G +D+++A FLR++ K+PVILAVNKCES K G + FW LGLGEP+ +S LHG G ++M+ + D + +D + ++ INVAI+GRPNVGKSSL+N +FG R+IVSDV GTTRDSIDA+ ER YR VDTAGIRRKGK+++G EFFMVNRA +AIRRADVVLL++D AG+T+QDRVLA ++ DGRAC+++CNKWD V DK+ ++Y+++V Y R+ L ++WA + F SA TGQR K+++ VD HRRR+ TSVLNEVLRDA LWQ PP++++ +Q KIYY +Q++TRPPT+ VF N+P L DNYKRYLDRK RE L G +STPIR+++RG+++R
Sbjct: 1 PLIAVVGRPNVGKSALVNRLAGTQSGGAIVADEEGITRDRTYRNAEFLGEAFQLVDTGGLVFDDNDA-LFAKEIREQAMIAIEESAGVILVVDGQMGPTSMDEQLAIFLRKEVLKKMPVILAVNKCESDKNGAYLASQFWNLGLGEPFAVSALHGVGTAEVMEKMFDDIAKPLDGEDDTDEEINVAIIGRPNVGKSSLINTIFGSNRAIVSDVAGTTRDSIDAIMERPSSDPEGLPTIYRFVDTAGIRRKGKIEFGPEFFMVNRALRAIRRADVVLLVLDATAGVTEQDRVLAQKISDDGRACVILCNKWDAVIDKDSSTYDQSVKYFREELPQIRWAPILFVSAATGQRVGKIYEAVDSAVNAHRRRISTSVLNEVLRDATLWQPPPARRNG--AQAKIYYGSQVSTRPPTIVVFVNDPNLINDNYKRYLDRKMRESLDGFESTPIRWMFRGRRVR 454
BLAST of mRNA_P-littoralis_Contig209.33.3 vs. uniprot
Match: A0A6U3PFH2_9STRA (GTPase Der n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PFH2_9STRA) HSP 1 Score: 530 bits (1364), Expect = 1.980e-175 Identity = 275/537 (51.21%), Postives = 366/537 (68.16%), Query Frame = 3
Query: 849 RARSKRRVPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDIVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGMAGCNILDQEIARFLRQQ---KVPVILAVNKCESQKFGEIQTADFWCLGLGEPWPISGLHGDGIYD----MMDNVK------------------------DHLYDVDQSAELE--------------------------------DNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRT--------YRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACIVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKKLRRMEQDSRKNPKP 2243
R R ++ P++A++GRPNVGKS +VNR+A G+IV DE G+TRDRTY+ A + G+ F +VDTGGLVFDD +FA+EIR+QA++A+EE+ AVI+VVDG G +DQ++A FLR++ VPV +AVNKCES+K G + ADFW LGLGEP+P+S LHG+G+ + M D+V D+ +VD E E + +N+AIVGRPNVGKSSLLN LFG RSIVSD+ GTTRDSIDA+ ER YR VDTAGIRRKGKV++G EFFMVNRA +AIRR+DV LL++D AG+T+QDR+LA ++ DGRAC++VCNKWD V DK+ ++Y+K+V Y R+ L V+WA + F SA TGQRC K++ VDE V HRRR+ T++LNEVLRDA+LWQ PP++++ +Q KIYYCNQ++TRPPT+ VFCN+PKL DNYKRYLDRKFRE L G ++TPIR+++RG+++R + + + N +P
Sbjct: 93 RHRRTKKEPLIAIVGRPNVGKSALVNRIAGTQSGGAIVADEPGITRDRTYRSAEFLGERFQLVDTGGLVFDDTDA-LFAREIREQAMVAIEESAAVILVVDGKIGLTNMDQQLADFLRKEVTKDVPVHVAVNKCESEKTGAVAAADFWSLGLGEPFPVSALHGNGVAEVLEAMFDSVVKKGTAIQGFGTKVVEMKKAQQAIIDYTKEVDGEDETEQFLRKYGVGDDASKVIEKYEKAMAAFDEEEAMEELNIAIVGRPNVGKSSLLNTLFGGARSIVSDMAGTTRDSIDAVMERPPAPGSDAPPTLYRFVDTAGIRRKGKVEFGPEFFMVNRALRAIRRSDVALLVLDATAGVTEQDRILAQKIADDGRACVIVCNKWDAVVDKDSSTYDKSVKYFREELPQVRWAPILFISAATGQRCGKIYATVDEAIVAHRRRISTAILNEVLRDAILWQPPPARRNG--AQAKIYYCNQVSTRPPTIVVFCNDPKLINDNYKRYLDRKFRESLDGFEATPIRWIFRGRRVRDIARSRKMNGEP 626
BLAST of mRNA_P-littoralis_Contig209.33.3 vs. uniprot
Match: A0A7S2WMX9_9STRA (GTPase Der n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WMX9_9STRA) HSP 1 Score: 528 bits (1361), Expect = 5.230e-175 Identity = 277/537 (51.58%), Postives = 362/537 (67.41%), Query Frame = 3
Query: 849 RARSKRRVPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDIVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGMAGCNILDQEIARFLRQQ---KVPVILAVNKCESQKFGEIQTADFWCLGLGEPWPISGLHGDGIYDMMDNV----------------------------KDHLYDVD-----------------QSAELE---------------DNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGG--------RTYRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACIVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKKLRRMEQDSRKNPKP 2243
RAR ++VP++A++GRPNVGKS VNR+A G+IV DE+G+TRDRTY+ A + G+ F +VDTGGLVFDD+ G +FAKEIR+QA+IA+EE+ AVI+VVDG G +D E+ FLR++ +PV +AVNKCES+K G + A+FW LGLGEP+ +S LHG G ++M+ V KD D+D + A +E + INVAIVGRPNVGKSSLLN +FG R+IVSDV GTTRDSIDA+ ER YR VDTAGIRRKGK+++G EFFMVNRA +AIRRADVVLL++DV AG+T+QDR+LA +V DGRAC++VCNKWD V DK+ SY K+V Y R+ L V+WA + FTSA TGQR K++ VDE HR+R+ T++LNEVLRDA+LWQ PP+K++ +Q KIYYCNQ++TRPPT+ VFCN P L DNYKRYLDRK RE L G ++TP+R+++RG+++R + + + N P
Sbjct: 91 RARRNKKVPLIAIVGRPNVGKSAFVNRIAGTQSGGAIVADEAGITRDRTYRNAEFLGEQFQLVDTGGLVFDDRDG-MFAKEIREQAMIAIEESVAVILVVDGQVGMTTMDDELGTFLRKEITRDLPVHVAVNKCESEKTGGVAAAEFWNLGLGEPFAVSALHGVGTAELMETVFASIVRKKSAIQGFGTKAINLKEAKRALKDIKLDIDGEDDTDKFLRKYNLGRDEEAVIERYEEALASLDYDDEPEEINVAIVGRPNVGKSSLLNAIFGTNRAIVSDVAGTTRDSIDAVMERPAPENSDENPTLYRFVDTAGIRRKGKIEFGPEFFMVNRALRAIRRADVVLLILDVLAGVTEQDRILAQKVADDGRACVIVCNKWDAVVDKDSDSYVKSVKYIREELPQVRWAPILFTSAATGQRVNKIYGAVDEAVKAHRKRISTAILNEVLRDAILWQRPPAKRNG--AQAKIYYCNQVSTRPPTIVVFCNEPSLINDNYKRYLDRKMRESLSGFEATPVRWIFRGRRVRDVMRARKMNGNP 624
BLAST of mRNA_P-littoralis_Contig209.33.3 vs. uniprot
Match: A0A7S4IQC5_9STRA (GTPase Der n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQC5_9STRA) HSP 1 Score: 527 bits (1357), Expect = 6.040e-174 Identity = 273/536 (50.93%), Postives = 364/536 (67.91%), Query Frame = 3
Query: 849 RARSKRRVPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDIVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGMAGCNILDQEIARFLRQQ---KVPVILAVNKCESQKFGEIQTADFWCLGLGEPWPISGLHGDGIYDMMDNV------------------------------KDHLYDVDQS-----------------------------AELEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFER---GGRT-----YRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACIVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKKLRRMEQDSRKNPKP 2243
R R ++VP++A++GRPNVGKS +VNR+A G+IV D G+TRDRTYK A + G+ F +VDTGGLVFDD +FA+EIR+QA+IA+EEA AVI+VVDG G +DQ++A FLR++ K+PV LAVNKCES+K G + A+FW LGLG P+P+S LHG G D++++V ++ L + D++ E+++ +N+AIVGRPNVGKSSLLN LFG++R+IVSDV GTTRD IDA+ ER GG YR VDTAGIRRKGK+++G EFFMVNRA +AIRRAD+ LL++D G+ +QD +LA ++ DGRAC++VCNKWD V DKND +Y+K+V Y R L ++WA + FTSA TGQR K++ VDE HR+RV T+VLNEVLRDA+LWQ PP++++ +Q KIYYCNQ++TRPPTV VFCN+PKL DNY+RYLDRKFRE L G ++TPIR+++RG++ R M ++ N P
Sbjct: 125 RHRRNKKVPIIAIVGRPNVGKSALVNRIAGTQSGGAIVADVEGITRDRTYKPAEFLGERFQLVDTGGLVFDDSDA-LFAREIREQAMIAIEEAAAVILVVDGRVGPTNMDQQLADFLRKEISGKIPVTLAVNKCESEKTGGVAAAEFWGLGLGNPFPVSALHGVGTADLLEDVYEGIVKKASAIQGFGTKVKELLAAKGAILSEEPLEEEDETDLLLRQYGVGNDEDRALKRYEDAMNAFDDEEMQEEVNIAIVGRPNVGKSSLLNTLFGDSRAIVSDVAGTTRDCIDAVMERPAPGGSNDLPTIYRFVDTAGIRRKGKIEFGPEFFMVNRALRAIRRADIALLVLDATQGVAEQDCILAQKIADDGRACVIVCNKWDAVVDKNDKTYDKSVKYFRDELPQIRWAPIIFTSAATGQRVGKIYGAVDEALKAHRKRVSTAVLNEVLRDAILWQPPPARRNG--AQAKIYYCNQVSTRPPTVVVFCNDPKLITDNYRRYLDRKFRESLDGFEATPIRWIYRGRRARDMRRNRNMNGDP 657
BLAST of mRNA_P-littoralis_Contig209.33.3 vs. uniprot
Match: A0A0S3TZP2_9CYAN (GTPase Der n=6 Tax=Cyanobacteria TaxID=1117 RepID=A0A0S3TZP2_9CYAN) HSP 1 Score: 513 bits (1322), Expect = 7.230e-172 Identity = 261/455 (57.36%), Postives = 330/455 (72.53%), Query Frame = 3
Query: 870 VPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDIVDTGGLVFDDKGGDVFAKEIRQQALIALEEATAVIMVVDGMAGCNILDQEIARFLRQQKVPVILAVNKCESQKFGEIQTADFWCLGLGEPWPISGLHGDGIYDMMDNVKDHLYDVDQSAELEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACIVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKKLRRMEQDSRKN 2234
+P+VA+IGRPNVGKST+VNRLA+ +IVFDE GVTRDRTYKRA++ ++F +VDTGGLVFDD F IR+QA+ AL E+ A I VVDG AG DQEIA++LRQQ VPV+LAVNKCES G IQ A+FW LGLGEP+P+S +HG G D++D V +HL D+ E + VAI GRPNVGKSSLLN GE RSIVS + GTTRD+ID + ER G+ YRL+DTAGIR+K V+YG EFF +NRAFKAI R+DVVLL++D G+T+QD+ LA R+ +GR C+V+ NKWD VE + Y R L V+WAE F SAKTGQR K+F+L+D A QH+RRV T+V+NEVL DA+ W PP+ + QGKIYY Q++T PPT+A+F N+P LF +NY+RY+DRKFRE LG + TP+R LWRGKK+R +E+ + N
Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAQ--VQDAIVFDEPGVTRDRTYKRAFWRDREFQVVDTGGLVFDDDTE--FLPLIREQAMAALSESKAAIFVVDGQAGLTQADQEIAQWLRQQPVPVVLAVNKCESLDQGLIQAAEFWELGLGEPYPVSSIHGSGTGDLLDQVVEHLPPTDEIEETLET-KVAIAGRPNVGKSSLLNAFVGENRSIVSPISGTTRDAIDMLVERDGKQYRLIDTAGIRKKKNVEYGPEFFGINRAFKAIDRSDVVLLVIDALDGVTEQDQKLAGRIDDEGRGCVVIVNKWDAVEKDSHTIYEYD-QQIRDRLHFVEWAESIFISAKTGQRVEKIFELIDRAAEQHKRRVSTAVINEVLEDALSWHTPPTTRQG--RQGKIYYGTQVSTAPPTIALFVNDPNLFNENYRRYIDRKFRESLGFQGTPVRLLWRGKKVREVERGHQAN 449 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig209.33.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig209.33.3 >prot_P-littoralis_Contig209.33.3 ID=prot_P-littoralis_Contig209.33.3|Name=mRNA_P-littoralis_Contig209.33.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=687bp MTPKHHLQVNLSMEEPALSLRAAFRSRRRRSKAACHVLAAVAVAVVAAAGback to top mRNA from alignment at P-littoralis_Contig209:203780..219806- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig209.33.3 ID=mRNA_P-littoralis_Contig209.33.3|Name=mRNA_P-littoralis_Contig209.33.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=16027bp|location=Sequence derived from alignment at P-littoralis_Contig209:203780..219806- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig209:203780..219806- >mRNA_P-littoralis_Contig209.33.3 ID=mRNA_P-littoralis_Contig209.33.3|Name=mRNA_P-littoralis_Contig209.33.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2061bp|location=Sequence derived from alignment at P-littoralis_Contig209:203780..219806- (Pylaiella littoralis U1_48)back to top |