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Homology
BLAST of mRNA_P-littoralis_Contig209.27.1 vs. uniprot
Match: D7G3H0_ECTSI (Globin, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H0_ECTSI) HSP 1 Score: 226 bits (576), Expect = 6.580e-64 Identity = 105/150 (70.00%), Postives = 127/150 (84.67%), Query Frame = 3
Query: 90 YGVNAPSLTQGFSSVAMLLTFDGQTGFEEHLQTEYAAENLWFWKQGMAFRSSSFASPDHRRDEARRIYDAYLSVNSPDQVNISHDDRESVLAALEGRPGAQAVGAGLFDEALIQVEDMLILGPFPRFASSTVKNIESSWTKVVEGAGVED 539
YGV APSLT FSSVA+LL FDG+ GF++HL+ EYAAENLWFWKQGM FRS+ F RR+EARRI+D +L+V+SPDQVNISH+DRE VLAALE RPGAQAVGAGLFDEAL+QVE+ML+LGPFPRF S TV+ +++SW KV++ G +D
Sbjct: 417 YGVRAPSLTAAFSSVAILLRFDGEAGFDKHLEMEYAAENLWFWKQGMKFRSTQFEETARRREEARRIFDTFLAVDSPDQVNISHEDREDVLAALENRPGAQAVGAGLFDEALVQVENMLVLGPFPRFVSVTVETVKTSWQKVLDRFGFQD 566
BLAST of mRNA_P-littoralis_Contig209.27.1 vs. uniprot
Match: A0A6H5K1U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1U5_9PHAE) HSP 1 Score: 206 bits (524), Expect = 1.240e-56 Identity = 102/170 (60.00%), Postives = 123/170 (72.35%), Query Frame = 3
Query: 90 YGVNAPSLTQGFSSVAMLLTFDGQTGFEEHLQTEYAAENLWFWKQGMAFRSSSFASPDHRRDEARRIYDAYLSVNSPDQVNISHDDRESVLAALEGRPGAQAVGAGLFDEALIQV--------------------EDMLILGPFPRFASSTVKNIESSWTKVVEGAGVED 539
YGV PSLT FSSVA+LL F+G+ GF++HL+ EYAAENLWFWK GM FR + F RR+EARRI+D +L+V+SPDQVNISH+DRE VLAALE RPGAQAVGAGLFDEALIQV E+MLILGPFPRF S T + +++SW KV++ G +D
Sbjct: 408 YGVRTPSLTSAFSSVAILLRFNGEAGFDKHLEMEYAAENLWFWKHGMNFRCTQFEGTAQRREEARRIFDTFLAVDSPDQVNISHEDREDVLAALENRPGAQAVGAGLFDEALIQVATVGWSRPAGSVNPFIFVQVENMLILGPFPRFVSVTAETVKTSWQKVLDRFGFQD 577
BLAST of mRNA_P-littoralis_Contig209.27.1 vs. uniprot
Match: W7R3G1_9ALTE (Hemoprotein n=2 Tax=Catenovulum agarivorans TaxID=1172192 RepID=W7R3G1_9ALTE) HSP 1 Score: 96.7 bits (239), Expect = 4.400e-21 Identity = 51/106 (48.11%), Postives = 66/106 (62.26%), Query Frame = 2
Query: 548 FYATLFDMAPHLETLFTRSKHVQGEMLTGIVETSVRLLNNLQDLVPELVQLGLRHNAYKVRKEHFPIVGDALIATLSVMLQDEFTEEIKQAWLVVYKLMANIMISA 865
FYA LF++AP + LF QG L ++ T+V L NL LVP L RH Y V+KEH+ +VG ALI TL L D FTEE+KQAW+ VY L++++MI A
Sbjct: 27 FYARLFEIAPEVRPLFKADLTEQGAKLMQMIGTAVASLTNLDALVPVAQDLAKRHIDYGVKKEHYAVVGAALIWTLEQGLGDAFTEEVKQAWVDVYGLLSSVMIDA 132
BLAST of mRNA_P-littoralis_Contig209.27.1 vs. uniprot
Match: A0A1B1Y9G5_9FLAO (Hemin receptor n=4 Tax=Wenyingzhuangia TaxID=1518147 RepID=A0A1B1Y9G5_9FLAO) HSP 1 Score: 96.7 bits (239), Expect = 4.770e-21 Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = 2
Query: 548 FYATLFDMAPHLETLFTRSKH----VQGEMLTGIVETSVRLLNNLQDLVPELVQLGLRHNAYKVRKEHFPIVGDALIATLSVMLQDEFTEEIKQAWLVVYKLMANIMISA 865
FY+ LF++ P L+ LF + + QG L ++ +V L+N++ L+P L LG RH AY+V K H+ VG ALI TL+V L D+FT E+KQAW+ VY +MA++MI A
Sbjct: 27 FYSKLFELDPKLKPLFPAADNDKMKEQGNKLMTMLSAAVAGLSNIEALIPVLQDLGKRHVAYRVEKSHYDTVGTALIGTLAVGLGDDFTPEVKQAWVDVYGVMASVMIEA 136
BLAST of mRNA_P-littoralis_Contig209.27.1 vs. uniprot
Match: W0LFP8_9GAMM (Hemin receptor n=1 Tax=Chania multitudinisentens RB-25 TaxID=1441930 RepID=W0LFP8_9GAMM) HSP 1 Score: 94.7 bits (234), Expect = 2.280e-20 Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 2
Query: 548 FYATLFDMAPHLETLFTRSKHVQGEMLTGIVETSVRLLNNLQDLVPELVQLGLRHNAYKVRKEHFPIVGDALIATLSVMLQDEFTEEIKQAWLVVYKLMANIMISAL 868
FY LF + P L +LF +VQ + L I+ V+ L N++ L+P L L LRH Y V++E++ VG ALI TL L++EFTEEIKQAW+ Y L++ +M SA+
Sbjct: 27 FYEKLFTLDPSLRSLFRTEAYVQRKKLIDILTLGVKGLENIERLIPTLQSLSLRHVNYGVKEEYYDTVGAALIYTLGASLKEEFTEEIKQAWVEFYALLSGVMKSAV 133
BLAST of mRNA_P-littoralis_Contig209.27.1 vs. uniprot
Match: UPI000305D9F9 (globin domain-containing protein n=1 Tax=Catenovulum agarivorans TaxID=1172192 RepID=UPI000305D9F9) HSP 1 Score: 94.7 bits (234), Expect = 4.420e-20 Identity = 50/124 (40.32%), Postives = 78/124 (62.90%), Query Frame = 2
Query: 548 FYATLFDMAPHLETLFTRSKHV-QGEMLTGIVETSVRLLNNLQDLVPELVQLGLRHNAYKVRKEHFPIVGDALIATLSVMLQDEFTEEIKQAWLVVYKLMANIMISALDPSKDDNAARGSMLET 916
FY LF++AP ++ +F + QG+ L + +V L+NL+ +VP + QLG++H Y V++EHFPIV DAL+ TL L D++ +E+K+AW+ Y ++A MI A+ KD AA+ S T
Sbjct: 27 FYGRLFEIAPQVKPMFKSTDMAEQGKKLMQTIGLAVNGLSNLEAIVPVVQQLGVKHIDYGVKEEHFPIVADALLWTLEQGLGDDWNDEVKEAWVTAYTILATTMIEAM---KDAQAAKPSSAPT 147
BLAST of mRNA_P-littoralis_Contig209.27.1 vs. uniprot
Match: A0A7Y4U0B6_9DELT (Hemin receptor n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4U0B6_9DELT) HSP 1 Score: 94.0 bits (232), Expect = 4.810e-20 Identity = 45/106 (42.45%), Postives = 70/106 (66.04%), Query Frame = 2
Query: 548 FYATLFDMAPHLETLFTRSKHVQGEMLTGIVETSVRLLNNLQDLVPELVQLGLRHNAYKVRKEHFPIVGDALIATLSVMLQDEFTEEIKQAWLVVYKLMANIMISA 865
FY LF + P L++LF QG+ L ++ T+V+ L+NL+ +VP L LG RH Y V++EH+ VG AL+ TL+ L + FT ++K+AW +VY +MA++M+ A
Sbjct: 27 FYRNLFTLDPSLKSLFQGDMEEQGKRLMEMIGTAVQKLDNLETVVPVLRSLGKRHVRYGVKEEHYQTVGTALLTTLAQGLGEHFTPQVKEAWTLVYGVMADVMMKA 132
BLAST of mRNA_P-littoralis_Contig209.27.1 vs. uniprot
Match: UPI001C06E2EB (globin domain-containing protein n=2 Tax=Zobellia TaxID=112040 RepID=UPI001C06E2EB) HSP 1 Score: 94.0 bits (232), Expect = 4.810e-20 Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = 2
Query: 548 FYATLFDMAPHLETLFTRSKHV---QGEMLTGIVETSVRLLNNLQDLVPELVQLGLRHNAYKVRKEHFPIVGDALIATLSVMLQDEFTEEIKQAWLVVYKLMANIMISA 865
FY LFD+ P L +F + + QG L ++ ++V LNNL+ LVP L LG RH YKV H+ VG AL+ TL L D+FT E+K+AW+ VY M+ +MI+A
Sbjct: 27 FYDKLFDLDPSLRAIFPKGEDAIAAQGNKLMSMLSSAVAGLNNLEMLVPVLENLGKRHIEYKVEPSHYETVGTALLGTLEAGLGDDFTSEVKEAWVSVYGTMSTVMINA 135
BLAST of mRNA_P-littoralis_Contig209.27.1 vs. uniprot
Match: UPI000C796937 (globin domain-containing protein n=1 Tax=Oceanicoccus sp. KOV_DT_Chl TaxID=1904639 RepID=UPI000C796937) HSP 1 Score: 94.0 bits (232), Expect = 5.080e-20 Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = 2
Query: 548 FYATLFDMAPHLETLFTRSKHVQGEMLTGIVETSVRLLNNLQDLVPELVQLGLRHNAYKVRKEHFPIVGDALIATLSVMLQDEFTEEIKQAWLVVYKLMANIMISALD 871
FY LF+ P L+ LF + QG+ L ++ +VR+L+NL LVP + +LG+RH Y V +H+ VG AL+ TLS+ L DEFTEE++ AW Y ++A MI+A +
Sbjct: 27 FYNNLFEADPELKPLFKGNMVEQGKKLMQMITAAVRMLDNLDQLVPIVQKLGIRHAGYGVVADHYDTVGAALLKTLSMGLGDEFTEEVETAWTEAYGILAATMIAAAE 134
BLAST of mRNA_P-littoralis_Contig209.27.1 vs. uniprot
Match: B1KM75_SHEWM (Globin n=2 Tax=Shewanella TaxID=22 RepID=B1KM75_SHEWM) HSP 1 Score: 93.6 bits (231), Expect = 6.710e-20 Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 2
Query: 548 FYATLFDMAPHLETLFTRSKHVQGEMLTGIVETSVRLLNNLQDLVPELVQLGLRHNAYKVRKEHFPIVGDALIATLSVMLQDEFTEEIKQAWLVVYKLMANIM 856
FY +LF + P L+ LF + VQG L +++ +V L++L LVP L QL RHNAY V+K HF VG+AL+ TL L E+T+E++QAW++V ++A+ M
Sbjct: 29 FYDSLFKIDPSLKPLFRNNIKVQGRKLVAMLKAAVDGLDDLNTLVPVLQQLAQRHNAYGVKKSHFTPVGNALLYTLKTGLGSEYTDEVRQAWIIVIHIVADTM 131
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7G3H0 |
| PFAMs | DEP,PAS_9,RGS |
| Model size | 935 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K02157,ko:K19838,ko:K21440 |
| KEGG Pathway | ko04011,ko04310,ko04390,ko04550,ko04934,ko05165,ko05200,ko05210,ko05213,ko05217,ko05224,ko05225,ko05226,map04011,map04310,map04390,map04550,map04934,map05165,map05200,map05210,map05213,map05217,map05224,map05225,map05226 |
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| Evalue | 1.38e-58 |
| EggNOG OGs | KOG3589@1|root,KOG3589@2759|Eukaryota |
| Ec32 ortholog description | RGS domain |
| Ec32 ortholog | Ec-19_004570.1 |
| Description | positive regulation of GTPase activity |
| Cds size | 492 |
| COG category | S |
| BRITE | ko00000,ko00001,ko01009,ko04131 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790014.1211672-UTR-P-littoralis_Contig209:141263..141342 | 1680790014.1211672-UTR-P-littoralis_Contig209:141263..141342 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig209 141264..141342 - |
| 1680790014.1340091-UTR-P-littoralis_Contig209:143166..143298 | 1680790014.1340091-UTR-P-littoralis_Contig209:143166..143298 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig209 143167..143298 - |
| 1680790014.143113-UTR-P-littoralis_Contig209:143627..143722 | 1680790014.143113-UTR-P-littoralis_Contig209:143627..143722 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig209 143628..143722 - |
| 1680790014.2143788-UTR-P-littoralis_Contig209:151276..151363 | 1680790014.2143788-UTR-P-littoralis_Contig209:151276..151363 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig209 151277..151363 - |
| 1680790014.2230113-UTR-P-littoralis_Contig209:152720..152770 | 1680790014.2230113-UTR-P-littoralis_Contig209:152720..152770 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig209 152721..152770 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790014.152012-CDS-P-littoralis_Contig209:143722..143729 | 1680790014.152012-CDS-P-littoralis_Contig209:143722..143729 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 143723..143729 - |
| 1680790014.160615-CDS-P-littoralis_Contig209:144409..144483 | 1680790014.160615-CDS-P-littoralis_Contig209:144409..144483 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 144410..144483 - |
| 1680790014.1732452-CDS-P-littoralis_Contig209:145207..145324 | 1680790014.1732452-CDS-P-littoralis_Contig209:145207..145324 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 145208..145324 - |
| 1680790014.1831691-CDS-P-littoralis_Contig209:148684..148789 | 1680790014.1831691-CDS-P-littoralis_Contig209:148684..148789 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 148685..148789 - |
| 1680790014.195459-CDS-P-littoralis_Contig209:150155..150270 | 1680790014.195459-CDS-P-littoralis_Contig209:150155..150270 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 150156..150270 - |
| 1680790014.20425-CDS-P-littoralis_Contig209:151202..151276 | 1680790014.20425-CDS-P-littoralis_Contig209:151202..151276 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 151203..151276 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig209.27.1 >prot_P-littoralis_Contig209.27.1 ID=prot_P-littoralis_Contig209.27.1|Name=mRNA_P-littoralis_Contig209.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=164bp
MLLTFDGQTGFEEHLQTEYAAENLWFWKQGMAFRSSSFASPDHRRDEARR
IYDAYLSVNSPDQVNISHDDRESVLAALEGRPGAQAVGAGLFDEALIQVE
DMLILGPFPRFASSTVKNIESSWTKVVEGAGVEDTGGSTRHCSTWRPTSK
PSSRGPSTCRGRC* back to topmRNA from alignment at P-littoralis_Contig209:141264..152770- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig209.27.1 ID=mRNA_P-littoralis_Contig209.27.1|Name=mRNA_P-littoralis_Contig209.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11507bp|location=Sequence derived from alignment at P-littoralis_Contig209:141264..152770- (Pylaiella littoralis U1_48)
GTCCTTTTGTGGATGACGTTCGGAGGGCGATAGAGCAGAAGCAGGAAGAG
GTGAGGCTGGATTTATTTTCCGTCTCTCTCGCGGCCGTGGCGGTGTTGGC
GGCGGCGGCGGTGGTGGTGGTGCAAACGGTTTGCAGCTAGGAAAGCTTGG
AGTGTTTTTGTTTCATGGGCAGGGTTAGGCTACGGCATTTGGTTCAGAAG
GTTTTGTTGAGAAGCAGTCCACGAGCGGAGCGATGTGGAAGTTCCTTTTC
GAACTGCTTCGAATTCATACCGACGTGGTCGTGATGTGCAGGTGTAAAGT
TTGTGCGCGAATAAAAAAAAAAATGAGACAGGAGTGCCCATATTTAATTT
TCGAGGTTTATGGCGTCTGTGTTGGTCTGTCTGTCTGTCTGTCTGTCCGA
GATGATGGCCACATTTTGTAACATTTTGGCACCAGTTCAGCACAGATCGT
TTGCGACCAAGGGCTTGAACGGATTAGGTAAATAGCATCTACCCATTGCT
GCTGGGTTCACCGCAGCCCGTGTCCTATGCGCACAGCTACGTTGTCGGAG
GCGCGCAATTATCGGTGTCCCTTTTTTGGGCAAAATGATGAGAGGCGTTT
TGTTTTGTGCCGGCGGAAGCCAGAGTGGCTACAAATCGAACCACGAAACT
CAACAGCAACCCACACGGCTTAACGCAGTAACGAATTGTTTTTGAGAAGC
GGCCCTCCAACACACACTGCTTCTCGACCCCGATCCACTAGTATTATTGC
CGTGGGGGCGGCAGAGGGAAGCGTTGTTTTGCCGGATTTTTCCGTCGTTA
TTTTGTTATTGTCCTGGGTTTTGCGGGGGTCGGTCGGATCACGTCGATTT
CTCGCCGACGAGATATGGGTAGAGAGAGGCGCCACGCCCTGCTGTTAGCG
TTCGTACATTGTCGCAGCGCTCTTCTGTATTGTATGTTGCTGCAGGGTGC
GATGGTGGCTTCTTCTGAGGGTGCCGTCGTCGTTCCTCGTTGTGGCGAAA
GAGCTACATAGCGAGTGCTGCTGTGTTGTACTCTTCTGGCGTCTGTTGTA
TGAAGCGCTTTTCCTTGGGACGTGGACAGCAGCATTTTTATGTACAGAAG
TGCTTCTTGTGCGTACCCACCGGAAATATATTTCCTAGAAATTTGACAGA
GCGTAGCTGCACTTGTTTATCATACATGGATGTGGTTGTACACGTGCACT
GACAACCCCGGTGTCAAGCAAATGCAGTGACACTCCGGGACAGCAGGCAA
GCAGCACAAGGTATGCCGGCATGCACATGAACATGATACTGTATGTTATG
TTTTTTCGTGAGCTTGCGTTTGTCCGTACCTTTTCATTTTCCTTAATTGT
CTAGCCTTTGTCTTTTTTTTGCTTGCAAATGATACGTGACGCGGCACCGA
CCAGCAGGAGGAGCAGCCGGGGGATAGCAGCAGCGTCAACAGTGGGTACG
GCGTGAATGCGCCGTCGCTCACGCAGGGGTTTTCTTCGGTGGCGATGCTG
CTCACGTTCGATGGGCAGACCGGCTTCGAGGAGCATCTCCAGACGGAGTA
CGCCGCCGAGAACCTCTGGTGAGACATGATAGCCACAGAGAAAGTCGTGT
GTAGGCGAGAGAAACCGTAGTTGATTCAACCAGTAGCAGCAGCAGCTGCA
TCAGGGTCGCGGTAGTCCGGTTCGAACGGGAATGTCAATACTTGTATCGA
TTGTTTTGGTAGCTGCGAGTTTGGCTGTCGAGGGTGTGTGTGGGTGGGGT
GGTATTGGAATTGCGATCCCTCGGAAGTCAACTTCTTGTTCGATGGCATA
CAGCGCAAAACTCGGAAGAGGGGCAACCTCGCGCAGATTACGGCGGTGGT
GGGTGGTTGTATGCACGACAACCTGGTGAGTGCCCAGTTTGTTCAAAGCA
GCAAAAAAAAGCGGCGTGTCCACGATGAGGAAGTCTGCTTAGCTCGCTGC
GTTTGTTCGGCAAAAAAGAAGAAAACGATTCAGCGTAGCATACATTTTAC
CGCTTTTGATCGTGTTCGTTGCCTTTCTCTCCTCTTTGAAAGAGGATGCC
GGACAACACAGCGCACACATACAGATACGCTAGCGCAGGCGCGCGTACGT
CCGCCGCTACCCACACCAAGGGAAACCTTTCTGATTTTTTATCCCGAGCA
TGTCCCTGACAACTTCTTGTCGGCCTTTGCGCTAAAAGTCATGGTCTCTG
CTCCTACTCCTCCTACCGAACAAGCACAACAAACACACGGACGAACGTAA
CATAAGCTTTCGCTGGCGGGCGGCGCCTTCCTTGAAAACTCCTTGATTGA
CTGCACCTTTTGGTGCGCTATCATGCTGACCACGGGCTAGACTTTTGTGG
TGAGCTACGTGTAACGTGATAATCAACATATATATATATGAATGTGTGCG
CGCCGCTGTGCTGGTGCTGCTTGCTGCTGCTGCTGCTGCTGCTGCTGCGT
GTTTTGGTGTTTTCATGATATTGACTACATGTCATATCTCAATCGAGCAG
GTTCTGGAAGCAGGGCATGGCGTTCCGGTCGTCGTCGTTTGCGAGCCCCG
ATCACCGGCGGGACGAGGCCCGTCGAATCTACGACGCGTACCTGTCCGTA
AATTCCCCAGACCAGGTACGTGCGAAGAGCGCGCGCGCACGGGCAGGTGG
GGGGGGGGGGGGGGGGGGGTAGGCTGCGTGTGCATGTGGAAACGACGTAT
CATATCGGGTACCAAGCGGACGAGTGTATTTCTTAGCTGTCTTGCGTTCA
ACAGCAGCGTATATCATAGTATCATTTGACACAGTAGATAAGAGCGTTTG
CACGGGGGGGGGGGGAGCGGTCAGGCTGCGTGTGCATGTGTAAATGACGT
ATCATATCGGGTACTAAGCGGACGAGTGTACGTTTTGCTATCACGTGACA
TGCCGAAGTCACGTAGCCATGATAGCGTCGCTATTCGTCGTTTGTACGAT
ATTATCTTCCCGTGGTATCAAAACAGGCGCAGTAGCGGTGATGGCCGGAC
ATGATGGTGGTGGTGATACTCGTGGTGGTTTTCAGACCCTTGATCAAGAC
CGACCTAAGACGCATGTGTGTACAATACATCTGCCGGTACATGGTTGCTA
AAAACAGGGTATCCTCCGTCAATCACGTAGGTTGTGCTTGGTATGTAGTG
TAAATGTCCTTCATGATTGACGGATGGCTGGTGTGAGGTCGCCCTCGGTA
TTTAGTAGATGGCTGGGTGGTGCCAGAATGCGATTCAGCGCCTTCATCAT
GGCCGGGCAATGTGTATTTTATCCGTCGGCGCTAATGAGGTAGTGTGAAC
ATCGCCGAGGCGGGTTACCCGCAAGGGTTAGCCGCGATTCTCGGATTTGT
AGATCAGCAGCGGAGGAGTCGACGCCAATGGTAAGTAAGCGGGACCGTAC
CCCCGACTGGCTGGGTAGAGCGTTGTGGTGCTGCTGTTTAAGATCGGCTC
GCTCCATCAGGCTCTCTGTATCATGCGTATCCAGTGTTTCTGTTTGTTCA
GTTTAATCCATTTCGTGCTATGTTTGAGACGCCGGTGGCCTTGTAGGCAT
TTTTTTATGTTTGAAACCAGGTACGTACGACGTTTAGAAAGACAGATATT
ACACATATCCAATGACTCTTGGTTCAGTGGACATGCGTACCTAAATAACA
ACATGACTGTGTTGCATACCTGCCACACACGCCTTGGATCATTATCACAC
GCAAGCAAGAATATAGTGACAAAAATGTGTTTCTCCGGAACGGCAGCAGT
ACAGTACAAGCAAACAGTCAGTCCACACCCGCACACACAAATGCTTGAAA
TGTCACATTTTTGGTTGACAATTTTTTTTTTCTCGTACGGTGCGGCACTC
GCCACGCTTCGTCCCGCAACGGCGCCGGGGTGTTGCGTACCGACTGTACC
GCTGTACTGTACCGTACTGCACTGTTCTGTACTGTATTGTGCTGTACTGT
ACTGCACTGCACTGCACTGCACTGTACACAGGTGAACATCTCCCACGACG
ACAGAGAGAGCGTCCTGGCGGCGCTGGAGGGTAGACCAGGCGCGCAGGCC
GTGGGCGCAGGCCTTTTCGACGAGGCCTTGATACAGGTGCATGTGTGTGC
GTGGGCGTGGGCGTGGGCGTGTGCATGTGCGTGGGCGTGGGCGTGGGCGT
GGGCGTGCGTGCGTGTATGGGTCAAGAAATTACTTCGTTATATACTTGTA
CTTCCAAAACCACAGCAGCTGGCTTGTTGAGCACTTGGACTGCGCTGATG
GGTGCAAGAGGGGCATCGTCACAACAACGTTTCATTCTCGTGCATGGAAC
GTTTTTTTCTCATAATGGCACATCATCCAAGCTGGGCCGGGCAAGACGAC
CTGAAACCGGCAATATCGCCGCGCGCGGCTCAATTTTTGGAGTTGGAGCC
TGACATTTTGAGGGGTGATTTGGACGGCACTCGCCGAGACAACTATTGGT
TGGCTTTTTTTTTGTTTTTGTTTTTTTCTCGAGATACGACCAAGTTTAGG
TTTCCCAAATACAGGAAACCTCTCGACAGAAGGACAAAAAGGGGGGGGGG
CGGGAAAGCCAACCAATAGTTGTCTCGGCGAGTACCTTCCAAATCACCCC
TCAAAAATTCAGGTTCCAACTCCAAAAATTGAGCCGCGCGCGGCGATATT
CCGGAACCACCTTTGACGGGAGGAAAAAGTCCAAAATATGCGTGGCCATG
ACATGTGCCCCATAGGATGTGTTTCATGAAGAGAGAGCATGAATTTGGTT
AGATAGCGCGTGCGCACTCTGTTCTAGCGTTAACTGTCCTCCTCCGCGCT
GCTGTGTTCTTTGCTTGGGTCTGCTGTGCTGTTGTCTGCCTACTCGCTAC
AAGCACAAGACAACACATGCGAAGTTGCGGCGAAAAATTCTGAATTCCAG
AAAAAAAAATTAAACAAAACGGTTTCATCCCGCTTTTTTGCGCCGCATAT
TGGTGCTCTGTGATTGGTTGTAAGAACCCTTCATTTGTCTGTACACGTGG
AATTTGTCTCTTTCAGCTTGGAGCTTGTTCGCCTCCGTTCCACAAATGCA
GCGACACTTGTAGCGAGAGAAAAGAAGTACGCAACGTCGAGTTATGACCA
TCTGACACATTCTGGGTTTCTTGCCCGGCCCAGCTTGTATCATAAACCAA
ATGTTATGTTCGTGTGAAATATCAAAACCAAGCATCGTGAAACACGTTCA
ATGCACATCGGTTCCTCCCCCATATCAGAAACCCCGTCATCCTTTAAAGT
CTTTCACGGGGACATATTTCGAGTATGTACGATGCAATGTGGGTTCGTTT
ATACCACTTTATGAAAACAGATGGTAAACGGTGCGGCATAGGTACAGTAC
AAGTATGGCCTTCTTTTACGGTAACTCGTTTTATTTTGTTTTTCCTCTTA
ACACCATGTGTGCATGGTTTGTGACCACGGGCGAGGCGATAGCGGTGAGC
TAATGCGAGAATCATCATAAACAACAACAACAACGACAATATTCCCTGCT
TTCATAAGCTGCACCCCCGGAGAGGTGGGTCTAGTGCACGTCCGTGGGGA
GAGACCAAGGGTCGCGCCCGTGCGCCACCAACCGAACCGCCACGCGGAAA
GGGTTCATCGATCAACCCTTTTGAGTGAACACCCAAAAAGAAAATCAGCC
CCCAATGAACAACGGAAAACGCGGAAAAGCTTTGTCAATCAGCCCTTTGA
GCACCAAAAAAGGAAATCAATCATCAATAAACAATAACAATCTCCGGGGA
GCATCATTGGCCGGGAGTTCACAGTCAAGTCCCCGATTCTTCTTTTTTTT
CGATTTTTTTCGATTTTTTTCCCGGTGGACAGACAAAAGTTCGACTTGCT
TACCTGTATACTTCGAAGTATAAGAAAGTGTGCCGGAACCCCCCCCCCCC
CACACAAAACAAGATGGGTACACTTGCCTGGTGTTGTAGCCAAGTCTCTT
TTGTTTATGTTTGGGGTGCTCAGCTACCTAGAAAACAGTTCGCCGCAAGG
GGACGTACACGGGATGATGTGACTCTTGTACAGCGCGGCTTGCCATGGGT
ACTGTGTAGGTTGCGTCACCACGCTTATTACACGGAGGAGAGACACTTAA
CCCCCCCCCCCCGCCGGAAAAGGCGCGTGTGATAGCATGAGCACCAAAAA
CCTTTTGAGGCTGTGGGGTTTCATGCAAAATGGAAGGCGGCGGTGTCCCC
CATCCGGTAGGAAACAAAGGGGTTGAAGACTGCCCAACACAACACACACA
CACGCACCCACCAGACGCCTTTCTCCCGTCAGCCAAACAGGCCGAAGAAC
CAACATTATTTTCGGCAGACAACAACGCCCGTGTTCACCACTGCCGTACA
GCGGCTCCTCTTGTCGAAACATGGACGATATTTGCCGCCACGTAAGTAGA
TAGGTGGACCTATCGCCCGCCGAGAAGCGCTGCTGCTGTGTGTGTGGCGT
GGTTTTTCCTTGATTTGCTCACCGCTCTTCTCTTCTTCTCCTCAACGTCG
CCCGGCTGGTTTTGACGTTTGACGTTTTGACCAATCGGCGAGCCTCAGGC
AATAAATTCATCAATCAGGATCAGGTAGGGGTTGTCCTTGCGATATGGCT
GTCCTCATCTCATTTCGAAGTATTACTCCAAATGTGCAGCATCAAGTTCA
TTCAGTGGACTTTTGTCAGATTTCTGTGCTCGGGTAGTGTTCCGATTTCC
TTATCGAAAGCACGTCGTTAACGCGTACCAGAAATGTGAAATACTTCGAA
AGATTGAAGACGATTAATTTTATCACTTCGAAGGAAACACTTGGACATAT
TTAATCCCAGGTAGATAGGCCGGTCGCCCCGGTGGTTCAGTTGGTTATCC
ACGCAACCTTCTGACACTCACGCGTGAGTTCGAATCCCAGTGCAGTAACA
CGACCTCGGTTTTTTTGTCACATTGCGCGTGAAAGTGGAAAGCGATCTAT
GCGTGAGTAAACGAAAGTTCGATCGTGCCATCGACGAGGGAAAGGGATCG
CTGTCCCCTTTCTCGCGATAAAAGCTCAACCAAAAACAAGGCAAGCACCG
CAGAGGGAAGTGGAGAAAAAAAAAAAAACTCCTGTGTTGACTTCCCCCTG
TGTGACCCCGGTTGAAGCGTCTACCTACCCGAAAGGTGTAGAGTGGCGTC
CAATTAAAGGGATGACAATACACACACAGCTTACTGATATTGAAGATTGT
ACACACACGTGATGTTTCACATTTATTTTTCGTACTTCAATATATTTTTT
TAAATGTTCCAAACGAAGTACTTATCAAACAGATGTATCTAAATATTCAC
TTCGAAGAAAATATTTGATACTTAAACATCAAGTACTATAATTCTTTATG
AAGTATCGTATCAACGTTGAACATGAAATATGAAATACGGACCCCCGTCC
ATCCCTCCTCGTGCGGTGATTGGTTGATTTCACTCGACCAAATCAGGTGG
AGGATATGCTGATTCTCGGGCCTTTCCCGCGCTTCGCCAGCAGTACGGTT
AAGAACATCGAGTCTAGCTGGACAAAAGTCGTGGAGGGTGCCGGTGTCGA
AGACACTGGAGGTGAAAACAAATAAATAAGCGTATCAATGAATTTGGTAC
GGACGTACTTCGAATATACATTTACATGAAATAATGCCATGTACCATGTG
TGATGTTGTGTTATGAAAAGGATACCAACCGGCTGTGCCAAACTTCGATT
TTCCGTGTGTCAAAGCAATCGGTGTCAGATTTCAATTTTCTACTGTTGCT
GGTCATCATGTGGGAATCTTTTTGTAGATTATTTCGCCCACCGTGTGGTG
TATTTTCTTTACTTCGTTTCGTTTGGAAGTATGTATGTCTTCGGTAATCC
CACGCAGGGCATGGCAGCCGGTATTGGACTTTGATGTCGGGCGTTGCGCC
CCACGTTGGTCGTTCTGTTTGACCCCGTCCTCTTCAAACGCCTGCTGTTT
GATCTGGTGGAGTTCATGGCCGTTCCATCGACTCGGAGATGTCTTCATTT
TGTCGCTTGTTCCCCCCCCCTCCCCCCCCCTCCCCCCCCCCTCTCTCTCT
CTCCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCTCTCCCTCCCTTTCGTTTTTTCTCCCTCTATCATCCCTCTCTCTCCTC
TCTCTGGCGCTGTCTCCCTGTCTTCTCTCTCTCCCTTCCCCTCTCTGGCG
CTGTCTCCCTATCACGGCCGCGCCTCCATCTCTGTCTCTCGACATGTACA
TCGTGTACATGTATTGTTTTATGTTCGTCAGAATCGTTCTACGCGACATT
GTTCGACATGGCGCCCCACCTCGAAACCCTCTTCACGAGGTCCAAGCACG
TGCAGGGGGAGGTGTGTGCAGAACAGTTTGTTTGTCTATGACGTTCTCTC
GTACGATGTATAAAATTCTTGATCGTTGCTGGCGGCGTATATACGATACG
AACGAAGGGCATTGTTTCGTTGTTGTTGTTGTTGTTGTTGTTTTCACCGA
CCATTCACGTATTTGGCTATTATTACGCTCATCGCCTGCTTGTTTTTTTA
CGGTCTTGGTTGTCTTGGTGAAACGTACACTTTAGTTCCTTTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCGATTTTAACTTATAAATGGTTGTGACC
ACCGAACGAAGTCGTCAGTGACCCGTCGGAGCAGCACAGACAAGGTTGGG
TTAATTTGTATTGCGATAAAGCAGTCAATACCCTAGTATTAGTCAGCTTG
TTGCGATCCGTGTCATCGCTGACAGTCCCGCTTTACGCCCCCGCCCCCGC
CTCCCCGCCCCCTCTCATGCGTGTTGTGTTGTGTAATGTTGTGGATGTTG
TGTGTGCTGTATGTGCTGTGTTATTTTGTTTTGTTCTATGTTGTGCTGCG
TTGCGCTGTGTTGTTCTGTGTTGCGCTGTGTTGTGTTGTGTTGTGCTGTA
TGCTGCTGGGTGTCTCCCCGTAAAACCGTGCGCCGTTTGTATATATATTT
CGTGATGCAAACATCGCACCACCTGATTTCATTTGGTCTAGATGCTAACG
GGAATCGTGGAAACATCCGTGAGGCTTCTCAACAACCTCCAAGACCTCGT
CCCGGAGCTCGTACAACTCGGCCTCAGACACAACGCCTACAAGGTACGTA
CGTGCTGCGTAGAAACCTTTTTTGAAGGGTAGAAAATGCTCACCCTATTG
CTTCCCTGCCGGGCTGGTCGCTCCGTTGATACGTGCAACAAGCAATTCCT
CCCGGAGAAGATGAGCGGGCTCGTCGGATGCGCATCACGGTCAACCGACA
TCACGAAATCCATAACCAACCCCCTGAGCTTTTGATGTGATTCTCCCTTG
GGGTCGTTTTTGTGTTCTTATTACGCGGTCCAACGTTGCTATCATATTCA
CTGTCTATTGCGCGCGCCACACGTATTTGTTCTTGTATTACGTTGCGTGG
TATGTAATGTTGCGTTACACAGGTGCGCAAGGAACACTTTCCCATTGTTG
GAGACGCCCTGATCGCCACGCTGAGCGTAATGCTCCAAGATGAGTTCACG
GAGGAGATCAAGCAGGCCTGGCTCGTCGTCTACAAGCTCATGGCCAACAT
CATGGTGAGGAGGGAGGAGGGGTGAAGGCACGCGACAATCCTGTCGCCTG
AAGCAAAGTGGGAAGGCATCCGAGGAATGATGTATACTTCGAAGTACGTC
AGACTGACGGAGGTATTGGTAGTACCATATCGACACGGCGTTGGTCAGAA
CAGACGGGACGATGAAATGGTCATATGATACGACCATTTCTACACAACGT
ATGGGATGATGGAATACGTACGTGTATTCCATCACCCCATCTGTCCTGAC
CACCGCTGTGTCGATATGGTGCTGAAAACCTCCATCAGTCTGACGTGCAC
TTCGAGAAATGTGTTGGGCAAAGGCATGTACGCCATTTGTAGTCAAAGGG
TGTTCGATATCATCATGATAACGGTGTGCGGAAGACGGCAGTCAGGCTGT
ATGTATGCCCACATACCAACAAGCGCAGTGTCGAGAGGAGAGTCAAGGAG
CGGAACAGACCTTTTTGAAAGGAACAGCACCTGCGAGAGCGTGTGCACGA
CGAGAGAGGGGGTCGGTGCTGGGGGCGGCCTAGGGAAAGGTCAACAACGG
AGTGAATCCGGCATGGCGGAGAAGCTGAAGGTTTTCATGGGTAACATCAA
CAGCACAAGGACGGCAGCATCAAAGAGTGTCCTCGACGACATAAACCACG
ATCTATCTGCAAGCTTTCACTTTTTGGAACTTCAGGGCGGGGGGGGTTGT
ATCACGTCGTCACCTGTTTTTGCAGAGAAAAGTGCGAAAAAACGGAGAGA
GAGAGAGAGATGCGGCAAAAGTGCTTGCGTTACTCCCGCGGCCTTGTTGC
TTGCGTTTTGCCCTTCATCGTGGATGCGACTCCTCCTTGGCAACATGAAC
ATCGTGCGTGATTTTGCTGTGCCCACCAAAGACGGCCCGGGAAAGGCGTG
ACAATTAATTGTCGATTTGTTTGTGTGGTGGGGCTTTTCGCTGCACTGCT
TGCTGTCTGCGGGTCCTTTGTCGTTGTGGCAGCACTCCCATGTGTCATCG
CGACCGTTTTTTTGTGCGTTCAATTTTCTCGACGATCGGGCCTGATGTAT
GTTGCAGGCAGCACTTCCGACAACAAGTGTTGTTGCCTACAGCCACGAGT
GGTTTCCCGTGGGACGGGGGGAGCACTGGACACGATGTTGATGTCGAATG
GGTACCTATGCGTGGTGGTACAGTAGTGTTTGGTCGCTTGTGCTGCACAC
CACGTAGTATGTAGTAGGAAAATGGCGTGTACCTTATTTGGCCTTGCGTG
TACCTTTCCTTTTACTTTCTGTGCTTTTTCGAACCTTCCTAGGGCTCAGC
GCTTCTTTTTTTTTTTTACCACGGCCTAGATCTTGGCGGCGATGCGCTAC
TGTTGTGAGAGCCAGCATCAACAACAACAACGACGACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAATCAAAGAGCGAGCGTGAAAAAA
AATCGTAGCATGCACGGTTGAGAGACAGCAGTCGAAACGACCAGCGGGCG
GTAGTGCTTATGGTGTGCATCACCAAGAGCCGGGGAAGGAGGACCTTTCT
GTCGCAATCATCTCGTGAAATCAAAATTGGATGATTACATCGCTAAGATA
GGCAGGCGCAGACCGAATATCATATGTATCTCGCTGCTGGACCCTTTTCG
AATGTGAACTCGTCAGCGCCAGTTGGTAGGCATGGATAAGCGGAATGAGG
GCGTTGTGTTAGTGTCACTGTTGCACCTACGATAGGCCTCTACACTCCCC
CCCCCCCCCCCCCGCCAAGAATCATATAATCCCGTCGTCGTCGTCCCCTA
CTTCTTGAATTGAAACTACACAACGTAGATCTCGGCGCTCGATCCCTCGA
AGGACGATAATGCGGCCAGGGGGAGCATGCTCGAGACGTCGTCCATCAGC
TCCGACT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig209:141264..152770- >mRNA_P-littoralis_Contig209.27.1 ID=mRNA_P-littoralis_Contig209.27.1|Name=mRNA_P-littoralis_Contig209.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=492bp|location=Sequence derived from alignment at P-littoralis_Contig209:141264..152770- (Pylaiella littoralis U1_48)
ATGCTGCTCACGTTCGATGGGCAGACCGGCTTCGAGGAGCATCTCCAGAC
GGAGTACGCCGCCGAGAACCTCTGGTTCTGGAAGCAGGGCATGGCGTTCC
GGTCGTCGTCGTTTGCGAGCCCCGATCACCGGCGGGACGAGGCCCGTCGA
ATCTACGACGCGTACCTGTCCGTAAATTCCCCAGACCAGGTGAACATCTC
CCACGACGACAGAGAGAGCGTCCTGGCGGCGCTGGAGGGTAGACCAGGCG
CGCAGGCCGTGGGCGCAGGCCTTTTCGACGAGGCCTTGATACAGGTGGAG
GATATGCTGATTCTCGGGCCTTTCCCGCGCTTCGCCAGCAGTACGGTTAA
GAACATCGAGTCTAGCTGGACAAAAGTCGTGGAGGGTGCCGGTGTCGAAG
ACACTGGAGGTTCTACGCGACATTGTTCGACATGGCGCCCCACCTCGAAA
CCCTCTTCACGAGGTCCAAGCACGTGCAGGGGGAGATGCTAA back to top
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