mRNA_P-littoralis_Contig209.18.41 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig209.18.41 vs. uniprot
Match: D7G3H2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3H2_ECTSI) HSP 1 Score: 1362 bits (3525), Expect = 0.000e+0 Identity = 883/1606 (54.98%), Postives = 1013/1606 (63.08%), Query Frame = 2
Query: 110 DDCRAASFTPPIEVVHAFGSCPDRVRDNVCALDDGRVVYVVGSRVAVKATAESSVSGAXXXXXXXXXSNDRLEFLSTGLRVARVTALTCSPEKGFVAVCYKGVVD-GPNQGVAYATVYHMPTRPRPSRVKTLSYERPRRQQRQ----RGSSFSGSGSIEGTSRYDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXTSATAEFVSATFSHDSRFLVVLDGSPEWTLVWFEWKTGKRMYTLQLDSPVHRVALSPLDHSKTATAGADGHFRIWRTQQGGKVTPMVPIAGLREDVCYRDVAWLNGDRLVLVAHEGTVTLVSPSDVLQDWNLGDSDEEDASHPCSPSSPIPIVGGSGGSTDSIGTEQTMSAGAYEGSLNVVAAHARGFFVGGSHGQVLVFEQEKNAXXXXXXXXXXXXXXSARDTYALTRVVRIFGVDLVELRPTAEPDYRWLLAGAEDGEIGLLDVNELLSAAPDGGSLASSVTSSDGGVGSTRRGGGATLTSGTTGVKSGESRTTISRLCRGRSTQAAAPESSATGAAADEVSLETCYADGGG-IVSRGFAKAMDAFEDSLRVAADAELGLAGAGSRQQHAK-KGNGAAATRTISVSGSKQSRETTIGSPLYRPVARGLGLRGRQEPIFSGDGDLKGAGRRGGSLSCLTVCARKPLLGAIAKGGPRRSAGVAAAEAGEGRYSEMDAASNGDICGGGDTADSGVPRGKGQQQRLQNQHQPARGVEVQIWNYRTKRLLVRHRFGXXXXXXXXXXADSLVGSVIPAAGDDQRGDGVMDADGKXXXXXXXXXDVLLPVAISLHPSGNSIAVAFPHYVNVFYIVGAGGEAVGDQGDGDCGGVDGVAGIAASKDSLAMSRQQMGVAEAVAASDMAPLASLRSDQREFLTKGMFSAPGEQDQVINCDPVSAVHYSPGGHMLAVVTGKMVQVLGVHSGPAGGRLGRVQTFSGHASDVSSFCWGADDRRCWTTADGYIFEWEVGAGMGALGIDGVRRGEYISKRAVFEGIVADPALDGGVVACXXXXXXXXXXXXXXXT--NISGGSDDVGGALGGFDVG-RSESRQGSGSQGAAPVPTEKGRSLTVSDRTTINNISINRNNHDGDGEGRDRISPEAPQVSSGSSGSGNKIAKKXXXXXXXXXXXXXXXXXXXXXXXXSVCATTGGTMAPVASLPRGSTAPAPRSGGRTMATSDADALRPGGEGDQRKSSIFVWPRKIEASSQEAGLEATVPFRLTCVRATAFEARFKGVHNVLLAGTREGMALAFDWGRLLRNSGGGGCSGDRGWGNVKKEENGGEKAAALAPSAQVCLHSRPITSLALTADGTHFFTAAGDGAVFMCKVQLEGRHIVNTDSCDAAPAV---------GKLTPKLTNGATEAPLLQKSKLKLEGPFAGKQASEAAAAPGGSCMALEACVEELLVLMDQEAVARLQAKAAAAYQQLTQAKHQARFELEKSKRDQQKELAAVKEAGKMDLSMVEVDVACLRQALVKGKKEREDLVRVSAEQRKREASVMNAMYEKKLALQAESYIQLKIAYEELTQAAADDADEMHAKAELAAREHENSKREDMKRVLEDHRVLSGYVDFVSTQFHKAIDDEQLGHDKQI 4870
D+ AAS PPIEVVHAFGSCPD+VRDN+CALD+ RVVYVVGSRVAV A A S + + RLEFLSTGLRVARVTA+ CSP++ FVA CYK VV+ PNQ AYATVYHMP+RPR SRVKTLSYERPRRQQ+Q G S S +SR+DS SATAEF +ATFSHD + L +LDGSP WTL+WFEWKTGKRM+T+QLDSPVHRVALSP D+SKT TAGADG FRIW TQQGGKV+ MVPI GLR DVCYRDVAWLN DRLVL AHEGTVTLVSP++VLQ+W+L SD AS S P G+G S S+GT+ T+SAG + GSLNVVA H RGFFVGGS GQVLVFEQE A R+TYAL RVVRIFGV LVELRPT EPDYRWLLAG EDGEIGLLD +E+ SA PDG SL SS T + RLCRG AP ++ G A + T DGGG VSRGFAKAMDAFEDSLR AADAEL G GSRQQ +G+ + + S S S+++ + YRPVAR LG+RG G+G + E+QIWNYRTKRLL A L+GSV+ A GDDQ G DA G PV+ISLHPSG+SIAVAFPH VNVFYIVG+GGEA+GDQ + GG GV SK+ L+MS QQ+GVAEAVAA +MAPLA+LRSDQRE LTKGMFS PGEQ+ +INC+PVSAVHYSPGGH++AVVTGK+VQVLGVHSG AGGRLGRVQT SGHASDVS+FCWGAD+RRCWT ADGYIFEWEVG+G+GALG D VRRGE++SKR FEGIVADP LDGG+VACXXXXXXXXXXXXXX + GG G +G D G R +S++GSG AAP L + + T N N +DG+ +AP V ++ +G + K S CATTGG+ APV+ LPRGS+A A R GG +AT+DA L G+ Q SS FVWP K+E S E GLE R++G HNVLLAGT+ G+ALAFDWG LLR+S +GD G+++ EK L PSAQVCLHS PITSLALTADG HFFTAA DGAVFMCKVQLEGRH +++ A +V + PK AT + + K K+ A A AP SCMALEACVEE +VLM++EAV RLQAKAA+A QQLT KHQARFELEKS RDQQKELAAVKEAG+++LS++EVDVA LR+ALVKGKKEREDL R S EQRKREAS MNAMYEKKLALQAESY+QLK+AYEEL+QAA DDA+EM AKAE AAREHE SKREDMKRVLEDHR+L+GYVDFV QFHKAID EQ GHDKQ+
Sbjct: 8 DEDHAASCAPPIEVVHAFGSCPDKVRDNICALDEERVVYVVGSRVAVTAPANGSANDGGS-------GSSRLEFLSTGLRVARVTAVACSPDRRFVAACYKAVVEEDPNQTAAYATVYHMPSRPRASRVKTLSYERPRRQQQQGHLRSGGRSRSSNSSRSSSRHDS---YCSTASSGGTGDKGCGRFSPPPTVLPSATAEFATATFSHDGQILALLDGSPAWTLLWFEWKTGKRMFTVQLDSPVHRVALSPFDNSKTVTAGADGLFRIWSTQQGGKVSCMVPIPGLRGDVCYRDVAWLNADRLVLAAHEGTVTLVSPNEVLQEWDLSRSDGLGAS------SFPPDGDGAGDSAGSVGTDDTLSAGVHGGSLNVVATHRRGFFVGGSRGQVLVFEQETRAGGAS----------GGRETYALARVVRIFGVSLVELRPTMEPDYRWLLAGGEDGEIGLLDTDEIFSAVPDGDSLTSSXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXTPVPRLCRGGGH---APATAXXGVALETXXXXT---DGGGEAVSRGFAKAMDAFEDSLRAAADAELASTGTGSRQQGGNHRGSASLSAGPSSASASRETGGKVKANTQYRPVARALGVRG-----MLGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAGGIDGSSEIQIWNYRTKRLL----------------AGELLGSVVVAGGDDQVGGDGTDAGG------VREEGATCPVSISLHPSGDSIAVAFPHCVNVFYIVGSGGEAIGDQDNACGGGGGGVTDPVTSKEPLSMSLQQLGVAEAVAAVEMAPLATLRSDQREILTKGMFSVPGEQEPIINCEPVSAVHYSPGGHLIAVVTGKVVQVLGVHSGTAGGRLGRVQTLSGHASDVSAFCWGADNRRCWTAADGYIFEWEVGSGLGALGTDKVRRGEFVSKRVAFEGIVADPTLDGGLVACXXXXXXXXXXXXXXKNRADADGGRKLSRGTMGKLDGGARGKSQRGSGLPSAAPAAENCSPHLGNAPKRT------NSNGNDGNATAE----LQAPGVGGSNTNTGGERRSKRRHLEPS-----------------STCATTGGSTAPVSLLPRGSSAAAARRGGSRVATADAARL---GDRCQSSSSFFVWPPKLEPISGEPGLET----------------RYRGAHNVLLAGTKGGLALAFDWGCLLRDS----AAGDEEKGDLR------EKGGVLVPSAQVCLHSLPITSLALTADGKHFFTAAEDGAVFMCKVQLEGRHTTTSNTRGATTSVVGNAYSSFPPRPKPKPNAVATSSQHVSKGAEKV----ADAGAVGIVPAPSESCMALEACVEEGMVLMEEEAVGRLQAKAASALQQLTHVKHQARFELEKSSRDQQKELAAVKEAGRLELSLMEVDVASLRRALVKGKKEREDLARDSIEQRKREASAMNAMYEKKLALQAESYMQLKVAYEELSQAAVDDAEEMQAKAENAAREHERSKREDMKRVLEDHRILTGYVDFVGAQFHKAIDHEQAGHDKQV 1493
BLAST of mRNA_P-littoralis_Contig209.18.41 vs. uniprot
Match: D7G3H1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H1_ECTSI) HSP 1 Score: 451 bits (1161), Expect = 3.690e-136 Identity = 351/721 (48.68%), Postives = 410/721 (56.87%), Query Frame = 2
Query: 4946 MASKKELRTLSKRMEQQCTREVDSVLALAAEKEKSEQLEARVAVLEQEVRAKAQRLSEWENMTDKQKTAVSELEKLKKALTMQLMEQRSMLESKDAVVTKTKEKLDRHAKLQNEGVRQVASLQKEISAKARMLTAVQAEMSRLKASLQHREALLKATGTRVMSALDSATEKDHWLLVKQKVEAIVVPTLDRERLDGLDPDEAAMEQSRQRIKMQESLQKMRDALRQEHQNNEQQNLVRIAENLELTRELNLLRKKNTSLAAKVTRLGAKIKLDKEIRRKQQ----AARDHSHSAPEFPGALCGT-----GTRSFSSPLPRLCNLNTGEGGGGVAGTHRPYVGGXXXXXXXXVGVSFGDEEAAQQGQAAFETGGPSPMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADNFNGRSSTALGASXXXXXXXXXXXSRRAVTATAAGGAEQTQQRQPNQGPLSASL------LAARHGHWARPETGENMATPAVLSAAPVPRRSSGR----LRAGG---GGNRTAGGVGRPKSNKLGRSGMRVLMPGEGARDYSSLLKGSGSVRGRELEARLATAEAEATRLARENHRIALEAERAIGAREADAERAVVALTTELQKLRAAAAASKARNVDMMRGARNGEAIPAL--VGGERNSDGFAGLPSHFTSRGSSVNEDMGSGSTVVAVRLPSPGNTVCYSDGLSLSAPTPF--GVKDEDD 7030
MA++KELRTLSKRMEQQCTREVDS LAL AEKEK +QL+ARV VLE+EVRAKAQRLSEWENMTDKQKTAVSELEKLKKALTMQLMEQRSMLE+KD +V KT+EKL R+AK+QNEGVRQV LQKEISAKARM +AVQAE+ RLK SLQHREALLK TRVMS LDSA EK+HWL K +VEAIVVP L+RERLDGLDPDEAA EQSRQR+KMQ DKEIRRK AA+ S SAP GA G G SF PRL +LNTG G GT R YVG G + ++ A Q+G E GG P + AD T +G R ++A A + QQ+Q + P S+SL + A RPET + S AP R S R ++ GG R++ R K+ + GMRVL+PGEGARDYSSLL+GS ++RGRELEAR+ATAEAEAT LARENHRI +E+ER IGAR+ +A+RAV ALT EL K RAAAAA+ + + +A V +S AGL T SS SGSTVVAVRLPSPGNTV YS+ +SL+APTPF G+ +ED+
Sbjct: 1 MAARKELRTLSKRMEQQCTREVDSGLALTAEKEKCDQLQARVLVLEEEVRAKAQRLSEWENMTDKQKTAVSELEKLKKALTMQLMEQRSMLEAKDKLVAKTQEKLARNAKMQNEGVRQVGILQKEISAKARMYSAVQAELGRLKTSLQHREALLKGAATRVMSVLDSANEKEHWLSAKNQVEAIVVPILERERLDGLDPDEAATEQSRQRVKMQ---------------------------------------------------------FDKEIRRKXXXXXXAAQGFSSSAPGMLGACFGAPATGGGVASFLGGAPRLQSLNTG----GFDGTDRLYVG-------CGDGDAAFEDNADQEGHQPSELGGGQPSKAADTSA-------------------------------ADGAASGMGTTIGTPAMSAEPVQAD---RLISAMTAAEGIRQQQQQAVRLPRSSSLPARDGVITATGSARRRPETRGTITGKPAASTAPGDIRGSLRSPWAVKKGGVTRAVRRSSSSCSRFKNTAVAGGGMRVLLPGEGARDYSSLLRGSEALRGRELEARVATAEAEATWLARENHRITVESERVIGARDVEAKRAVGALTAELHKARAAAAAAGGARAGLRDLETHNQATSFSDDVDHGSSSSSRAGLR---TGGESSARNTAVSGSTVVAVRLPSPGNTVGYSENISLTAPTPFISGMSEEDE 616
BLAST of mRNA_P-littoralis_Contig209.18.41 vs. uniprot
Match: A0A7I8WAM4_9ANNE (DgyrCDS13433 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8WAM4_9ANNE) HSP 1 Score: 67.4 bits (163), Expect = 4.600e-7 Identity = 51/212 (24.06%), Postives = 103/212 (48.58%), Query Frame = 2
Query: 686 TAEFVSATFSHDSRFLVVLDGSPEWTLVWFEWKTGKRMYTLQLDSP-----VHRVALSPLDHSKTATAGADGHFRIWRTQQGGKVTPMVPIAGLREDVCYRDVAWLNGDRLVLVAHEGTVTLVSPSDVLQDWNLGDSDEEDASHPCSPSSPIPIVGGSGGSTDSIGTEQTMSA----GAYEGSLNV--VAAHARGFFVGGSHGQVLVFEQEK 1288
++EFVS +FS DS++L+ G P+WTL+++ W+ + M + + P V++V +P D+++ G + F+++R + T + A + + Y AW++ +R+V+ G + + +V + NL D + D + E+TM+ +++ S+NV +AA ++GF G+V +FE+ +
Sbjct: 106 SSEFVSVSFSPDSKYLITQGGKPDWTLLYWTWEKSRVMASTKTSDPRGSLPVYQVTFNPQDNTQICATG-NAIFKLFRYSE----TTLKQFAFQKAEQNYLCQAWVSDERVVVGTDSGKLLIFEAGEVKSEINLADLIKLDREK------------------SDLEREKTMTTISDEQSFDASVNVTAIAAFSKGFACTVGPGRVFIFEKSE 294
BLAST of mRNA_P-littoralis_Contig209.18.41 vs. uniprot
Match: UPI001939C05A (cilia- and flagella-associated protein 57-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939C05A) HSP 1 Score: 62.8 bits (151), Expect = 1.170e-5 Identity = 38/133 (28.57%), Postives = 72/133 (54.14%), Query Frame = 2
Query: 686 TAEFVSATFSHDSRFLVVLDGSPEWTLVWFEWKTGKRMYTL----QLDSPVHRVALSPLDHSKTATAGADGHFRIWRTQQGGKVTPMVPIAGLR--EDVCYRDVAWLNGDRLVLVAHEGTVTLVSPSDVLQDW 1066
T E+VS +FS DS++L+ G PEWTLV++ W+ K M T+ Q P+++V+ +P D+++ G + F+++R +G + G + E + AW++ +R+V+ G + L ++ D+
Sbjct: 106 THEYVSLSFSPDSKYLIAQGGKPEWTLVYWVWEKSKVMATMKTTNQAGQPIYQVSFNPQDNTQICVTG-NHIFKLFRYAEGN-----LKQFGFQKLEPQNFLSHAWVSDERVVVGNDSGHILLFENGEMKADF 232
BLAST of mRNA_P-littoralis_Contig209.18.41 vs. uniprot
Match: A0A7M5TYH9_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5TYH9_9CNID) HSP 1 Score: 60.8 bits (146), Expect = 4.520e-5 Identity = 51/206 (24.76%), Postives = 96/206 (46.60%), Query Frame = 2
Query: 692 EFVSATFSHDSRFLVVLDGSPEWTLVWFEWKTGKRMYTL----QLDSPVHRVALSPLDHSKTATAGADGHFRIWRTQQGGKVTPMVPIAGLREDVCYRDVAWLNGDRLVLVAHEGTVTLVSPSDVLQDWNLGDSDEEDASHPCSPSSPIPIVGGSGG-----STDSIGTEQTMSAGAYEGSLNVVAAHARGFFVGGSHGQVLVFEQ 1282
EFVS +FS DS++L+ G P+WTL ++ W+ K + + Q +S +++V +P D++ G G F+++R + A L Y +WLN ++L++ G V L ++ D+ + ++ E + G +GG S +S+ + S+ +AA+++GF G G + V+E+
Sbjct: 106 EFVSISFSPDSKYLIAQGGRPDWTLFYWTWEKAKVLASTKSSNQQNSAIYQVTFNPNDNTHVCVTG-HGIFKLFRYSENNLKQFAFQKADLHRH--YLCQSWLNEEKLLVGTDSGKVLLFEGGELKGDFPVIENTLEKS-------------GSNGGLSANASVNSLADLTSNKTVQPATSVPFIAAYSKGFVCSGGLGAIYVYEK 295 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig209.18.41 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig209.18.41 >prot_P-littoralis_Contig209.18.41 ID=prot_P-littoralis_Contig209.18.41|Name=mRNA_P-littoralis_Contig209.18.41|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2339bp MCWGGVVHAQQRRRMNIGVVGRDDDCRAASFTPPIEVVHAFGSCPDRVRDback to top mRNA from alignment at P-littoralis_Contig209:103419..136417+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig209.18.41 ID=mRNA_P-littoralis_Contig209.18.41|Name=mRNA_P-littoralis_Contig209.18.41|organism=Pylaiella littoralis U1_48|type=mRNA|length=32999bp|location=Sequence derived from alignment at P-littoralis_Contig209:103419..136417+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig209:103419..136417+ >mRNA_P-littoralis_Contig209.18.41 ID=mRNA_P-littoralis_Contig209.18.41|Name=mRNA_P-littoralis_Contig209.18.41|organism=Pylaiella littoralis U1_48|type=CDS|length=7017bp|location=Sequence derived from alignment at P-littoralis_Contig209:103419..136417+ (Pylaiella littoralis U1_48)back to top |