prot_P-littoralis_Contig209.26.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig209.26.1
Unique Nameprot_P-littoralis_Contig209.26.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length141
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig209.26.1 vs. uniprot
Match: A0A6H5K1U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1U5_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 4.210e-5
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 0 
Query:   67 RGIYRRGTSSFRNQISKFVRKESSNTVPGVSASSFPTDPPPMAAAT 112
            RG+YRRGTSSFRNQ SK VRKES  +VP  +AS  PT+PP   AAT
Sbjct:  795 RGMYRRGTSSFRNQFSKLVRKESILSVPPSAAS--PTEPPMTGAAT 838
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig209.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1U5_9PHAE4.210e-567.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig209contigP-littoralis_Contig209:140088..141150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig209.26.1mRNA_P-littoralis_Contig209.26.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig209 140086..141150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig209.26.1 ID=prot_P-littoralis_Contig209.26.1|Name=mRNA_P-littoralis_Contig209.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=141bp
PNGSAGSSSNWAGGRHPAFESAAAGNSVGISGNSTDVDGGSGGGGSGVGN
GVGTDVGNGGGRGGGVRGIYRRGTSSFRNQISKFVRKESSNTVPGVSASS
FPTDPPPMAAATPPAASAVKPLRDVTSATFEVAAATAAAAA
back to top