mRNA_P-littoralis_Contig208.6.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig208.6.1
Unique Name	mRNA_P-littoralis_Contig208.6.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig208.6.1 vs. uniprot
Match: A0A6H5KXP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXP0_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 2.170e-41
Identity = 123/275 (44.73%), Postives = 144/275 (52.36%), Query Frame = 1

Query: 1042 LSRQVESLLARVEFLEKRRSFEEAGWGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIRVRHGSGDGHHAVGVSTTPYTGLDVLFRTPKQQXXXXXXXXXXXXXXXLHHQPTLSPSRGHTRWADPFFTTTXXXXXXXXXXXRPRSPQRSRLTWCAGEGQGSIEARGGRAPPNSSG----MEGPESPPLYSLGERAGKWALEAPAWPSDPRSDGRNFPR-----GGEG-FDSRPRSATEGLA 1836
            LS+QV+SLLARVEFLEK+RSFE AG   G                               LG                                R   G+GHHAVGVSTTP+TGLDVLFRTPKQ                +H  P LSPSRG TRWA P  T+T           +  SP+RSRLTWCAG+GQ +IEARGGRAPP + G    ++ P SPPLYSLG+  GKWALEA + PSD   DGR+  +     GG+G + SRPRSATEG+A
Sbjct:  280 LSQQVQSLLARVEFLEKQRSFEGAGVSCGGSGRAPPLILTPPPR----------------LGGH------------------------------RAAGGEGHHAVGVSTTPFTGLDVLFRTPKQPQESAERYTQHV----VH--PPLSPSRGKTRWAAPRVTSTDGDNSNIG---QSESPRRSRLTWCAGDGQEAIEARGGRAPPRAQGEGPAVQQPPSPPLYSLGDARGKWALEARS-PSDLGGDGRSLSQNAARGGGDGRWGSRPRSATEGVA 498

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BLAST of mRNA_P-littoralis_Contig208.6.1 vs. uniprot
Match: D7FP16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP16_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 6.750e-40
Identity = 145/275 (52.73%), Postives = 161/275 (58.55%), Query Frame = 1

Query: 1042 LSRQVESLLARVEFLEKRRSFEEAGWGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIRVRHGSGDGHHAVGVSTTPYTGLDVLFRTPKQQXXXXXXXXXXXXXXXLHHQPTLSPSRGHTRWADPFFTTTXXXXXXXXXXXRPRSPQRSRLTWCAGEGQGSIEARGGRAPPNSSG----MEGPESPPLYSLGERAGKWALEAPAWPSDPRSDGRNFPR-----GGEGFD-SRPRSATEGLA 1836
            LS+QVESLLARVEFLEK+RSFE AG G                         XXXXXXXX  XXXXXXXXXXXXXXX                     G+GHHAVGVSTTP+TGLDVLFRTPKQ                +H  P LSPSRG TRWA P    T            P SP+RSRLTWCAG+GQ +IEARGGRAPP + G    ++ P SPPLYSLG+  GKWALEA + PSD   DGR+  +     GGEG   SRPRSATEG+A
Sbjct:  301 LSQQVESLLARVEFLEKQRSFEGAGVGCRGSGSLLNNRRGSEVGFLQEEHPGXXXXXXXXXXXXXXXXXXXXXXXXX---------------------GEGHHAVGVSTTPFTGLDVLFRTPKQPQESAERYSQHV----IH--PPLSPSRGKTRWAAPRVPPTDGGNSNVG---HPESPRRSRLTWCAGDGQEAIEARGGRAPPRAQGEGPAVQQPPSPPLYSLGDARGKWALEARS-PSDLGGDGRSLSQNAARDGGEGGGGSRPRSATEGVA 544

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig208.6.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig208.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KXP0_9PHAE	2.170e-41	44.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FP16_ECTSI	6.750e-40	52.73	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig208	contig	P-littoralis_Contig208:32905..46210 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Seed ortholog	2880.D7FP16
Preferred name	TAPT1
PFAMs	DUF747
Model size	1842
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0001501,GO:0001503,GO:0001701,GO:0003006,GO:0003674,GO:0004888,GO:0004930,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005788,GO:0005789,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0006457,GO:0006935,GO:0007154,GO:0007165,GO:0007186,GO:0007275,GO:0008104,GO:0008150,GO:0009605,GO:0009790,GO:0009791,GO:0009792,GO:0009793,GO:0009856,GO:0009888,GO:0009987,GO:0010154,GO:0010183,GO:0010638,GO:0012505,GO:0014031,GO:0014032,GO:0014033,GO:0015630,GO:0016020,GO:0016021,GO:0016520,GO:0022414,GO:0023052,GO:0030154,GO:0030176,GO:0031224,GO:0031227,GO:0031344,GO:0031346,GO:0031974,GO:0031984,GO:0032501,GO:0032502,GO:0032507,GO:0033036,GO:0033043,GO:0033365,GO:0034613,GO:0034975,GO:0035437,GO:0036064,GO:0038023,GO:0040011,GO:0042175,GO:0042221,GO:0042330,GO:0042995,GO:0043009,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044432,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044706,GO:0045185,GO:0045724,GO:0048316,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048608,GO:0048706,GO:0048731,GO:0048762,GO:0048856,GO:0048863,GO:0048864,GO:0048868,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0050918,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051235,GO:0051239,GO:0051240,GO:0051641,GO:0051651,GO:0051704,GO:0051716,GO:0060089,GO:0060485,GO:0060491,GO:0061035,GO:0061036,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070972,GO:0071944,GO:0072595,GO:0098827,GO:0120025,GO:0120032,GO:0120034,GO:0120035,GO:0120038,GO:1902017,GO:1902115,GO:1902117,GO:1903010,GO:1903012,GO:1904888,GO:2000026
Exons	3
Evalue	4.07e-43
EggNOG OGs	KOG2490@1\|root,KOG2490@2759\|Eukaryota
Ec32 ortholog description	Membrane protein,Tapt1/CMV receptor
Ec32 ortholog	Ec-05_001770.1
Description	positive regulation of bone development
Cds size	552
COG category	S

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680790010.9742215-CDS-P-littoralis_Contig208:32904..33336	1680790010.9742215-CDS-P-littoralis_Contig208:32904..33336	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig208 32905..33336 -
1680790010.984937-CDS-P-littoralis_Contig208:33933..34053	1680790010.984937-CDS-P-littoralis_Contig208:33933..34053	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig208 33934..34053 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680790010.9967701-UTR-P-littoralis_Contig208:34053..35140	1680790010.9967701-UTR-P-littoralis_Contig208:34053..35140	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig208 34054..35140 -
1680790011.007852-UTR-P-littoralis_Contig208:46007..46210	1680790011.007852-UTR-P-littoralis_Contig208:46007..46210	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig208 46008..46210 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig208.6.1	prot_P-littoralis_Contig208.6.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig208 32905..34053 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig208:32905..46210-
coding sequence from alignment at P-littoralis_Contig208:32905..46210-

protein sequence of mRNA_P-littoralis_Contig208.6.1

>prot_P-littoralis_Contig208.6.1 ID=prot_P-littoralis_Contig208.6.1|Name=mRNA_P-littoralis_Contig208.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=184bp
MVTPPPPRIRVRHGSGDGHHAVGVSTTPYTGLDVLFRTPKQQQDSPEQSS
RRQHHHHLHHQPTLSPSRGHTRWADPFFTTTTTSNTNTNDGDRPRSPQRS
RLTWCAGEGQGSIEARGGRAPPNSSGMEGPESPPLYSLGERAGKWALEAP
AWPSDPRSDGRNFPRGGEGFDSRPRSATEGLAAG

mRNA from alignment at P-littoralis_Contig208:32905..46210-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig208.6.1 ID=mRNA_P-littoralis_Contig208.6.1|Name=mRNA_P-littoralis_Contig208.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=13306bp|location=Sequence derived from alignment at P-littoralis_Contig208:32905..46210- (Pylaiella littoralis U1_48)
GCGCAGAACTGAACACAACTGAACTTCAAAAGCTAGCGTGCTGCGCACGT
AAACGTGACGAAAGCTGCTTCTGCTGGCACTCTGCAGAGGAGCGAAACTG
ATCCAAGGAGATAGAAATAACAACGCGCTCCTTTGGCTCGACACACAGAA
CCATATTGACTTTGAAGAACTCCGCTCTCCTTGTATGCGATCGGAGATGG
TGAGCGACACCACCGCTGTGTGCTCGACCACTACATCTACCACCACCACC
ACCCCCACCACCACCCCTACAATATCGGAAAAGCAGGCGATGATTTCCAG
CAGGGGGGGAGAAGCGGCTCCGACATCATCGGCGGCGGGCCTTGGCAATA
GCTTGGCTCCATCGACCTCGGGGGGTAAGTTGCACTCACTTTGTCGTCTT
GTGGCTGGCTCTTGTCGCATATTGAAGTCAGCCATCGTCGTTTGCGTTCT
GTATAGCAGTAATGAACTGCTGTTGCATCGTCCCCGGTTGCCCGCGGCAG
TATCATGATACTGCTGCTGTATGATACGGAGTACGAAGTATCAAAGGCCG
TCAGTGCGCAGCAGGATGCTGGTCCTGCTGCACTGCTACTTAGTGCATCA
TCACACGATACTGCTGTTGTTGTTGTTGTTGTTGTTGATTCTCACATTAG
CTCACTACCGCCGCAGTCTAGCCCGTGGTCACAGATACTGCTGTTGTATT
GGTTCATGCTTCACATGGGGGACAAAGGCGAGCTGCCTCATCGGGGGGTT
CGTTTCGTTCAGAATATGATGCATATCCATATCAGAGGATTATCATAGGA
CCGCAACCCGGCATCAGCATCAGTACTAGCACCAGCACCAAGAGGGGCCC
TCGACGATGGGGAATGAGTAAATCCAAACCCATGTATGACATCATTATGA
TATGATACTGCACCACTATGATATGCATAGTACCAGGAGCACCCGGCGGA
GTGGAACTTTAACTTTGCGCTGTACATGGTCTATACTCTAGCGTATTTAT
ATTACTCCGAGTAATTCTTAAGAGGGTGTTTGCGCAAAAGGATTTCTTTT
TTCCAAATACTTCGTATATTTTTTAACCCTTTGACCCCCCAGGGGTCTGG
AAAAAATAATCATGGAGCCAGAAATCAACTGATTCCGATGCCGATGATTG
GCGAATGGTGGACGGTCTCAAAAAAAAAAGGACTGACGTCTCGCTGGCTC
TGTCCGGTGAAAAATGTGACTTGGTTGTACACAGAAATCTGTCCCCAATT
TGCCCTGAAAAAAATGGGGACAGATTTCAGTCTAAAGCTACACCAAACTT
TTTTTGGGGGGTCAACTACACGAAGTTGTTTGTTTAGTTTTACAGGATGT
TTACTTCAAAGGGATACTGCTGTATGCAAGGTAGCACGCAGCAACACCGC
CACTTAGCATGGCAGATCAGGGTACCCCGCTTGACAACCACACAGCAGTA
GGGTTCCACTCCGCAAGGTTTTACCCGCGCACGACACTCAATCAGGGTCT
ACAGCATCTCATCAGCATCAGCAAGCAGCAGCTGCACTACTACTGAAGCC
AAAGATATCATCTGCATGTTGCATGTATGTGATCAACGCAAGGGTGTCGG
CATGTAATGGTACCCATGTGATGATACTCGTACGAGATCGCCGGGCATGT
TTGTAAGCTTTCAAACGTGCGTGGCGCGATGTGTCTGTTTGCAGTGTCGG
CCCCCGTGTGCGTAGTGTGTGTCTCACCAACCCATCGCACGACACATCAT
CAGCTAGCTGCTTGCTGCAGCATGCACAGCAGCAGCAGCAGCAGCAGCAG
TACAATAATAGTTGCAGAAATCAGGGTATTATGAGTGCAGCAGTACGTCA
GCATCAGCGTTTCATATGAGCGGTAGTCTAACATATAGTCTATGTATCAT
GTCTGATGTATGTGTGCATGTTGTGTGCAATGCAGGGAGGGTTGCCGGCA
TGAAGTGTGATACAACAAGACGATCGCCGTTGTGTCTACCATGCTGTCGA
GGGAAGAGAATAACACACAACAAACCTAACGGCCGGGCGCCCTTGGTCTC
CCATAATAATGAAAAAAACAAATGTGGCACGGAGGCAGCCAACTATTGGT
CGATCCACACACATTCCATCGAGCTCACGGAACCACACCCAAAATACCTG
TAGATAGGCGCCTTCAAAACCCAAGTAAAAAAAAAAAGGTGTCCCCAAAT
TGTCCCCAATTGGGATTGGGGGGTTCAAAGGGTTAAACTTACAAAAATGA
AAAAATGATGTCTTGGTAAGAAAAAAAAAAATCAATGAGTTCGCCTCTCT
CGAGACAAAGATCTGGAGCAGATATCGCAACGAACAAAAGAGTGAAATAC
GTCTACTAGTGTTTCTATACTCATCAGATAATGTACCGTTGCAGCTCCCC
TGAGGGTATCAGGCTCAACAAGACAATGAACATCTTTTTTGTTTGTAAAA
AAAAAATGCACGCCGAAGAACGTAAGTCTTTTGGCATATTTTTTCGGCTG
AGTTTGCGCAAAATAATTTCTTTTGTGGGGGCCGACGGTGCTGAAATACC
GTAATCATGCGAGTCATCGCACCCCCGTGTTAGCTTTTTTGCATTCCGTA
TTGCTCCACAACCAGGAGAGTACCACTGCCGAAAAGGGTGGTTTTGGAAA
GATCTCGTCGAGAGCTTTCGTATGACGGGTCGTTTGGTGTTCGCACTCTC
CTGGTTATGGAGCAATACGGAATGCAAAAAAGCTAACACGGGGGTGCGAT
GACTCGCATGATTACGGTACGCTGCTTGCTGCTGCCAGCACCGTAACTGC
AGCACACACCAAACACCAAACACACCCACTACTGCTGACAGAGGAACACA
CACACTGACGCACGCTGCTGCTATAAAAGAGATCACCCTTAGCACATCAT
ACTATTATACTGCTGTATCGTGGTAGTGGATGGTGCTGGAGCACCGCAAG
GAAATGCAGGAGAGAGATGGGTCAACCGAAGGCGGGCTCGCATCCGCAAC
GACGAACAAACGTCGTCCTCAGTGCTCTCCGCAGCGACAAACAAACGCGA
TGCCTGCAGCAGCAAATGCCTGATCCGCACACACACGCTCTCCACAGCGC
AAAGTCCGCCGTAGCGTCGATTAATTTTAACATCTATGATGTGGCGCCGT
CTCCTCGTCGCCATCGTCTGGCTGCAAGGGTATCTAGCACCAGCCCCTCT
TCGCTCCGTGCTGCGACAGCAGAGGGCTGGCCGCTTGTCTCAGTCAGGCC
GGGGTATTTCGTGACCAATCACATGTGGCCTTGCACAGTCTCGCCTGCAG
ATCAAATATCCTTTTCAAATATCGTTTCATCCAGGGAATTGGTGGAATTT
GAAACTAATACGAAGTACCAGGTATGTATTTCCTTGCAGTCGGCGGGGCC
TCCTGGGGTAACTCATAAAGGGTTTGTGAGAAAAAAAAATATTTCGCGCT
TACCACCCTCATGCTTCGCACTTTTAAAACCCTTCGGTCTTCAGTGCATT
TTTTTATAGGCAAACGCCAAAAAGCGGTATACCGCCTGGTTTCCGCGCCA
CAAAGCGGTACACCAAAATACACCTGGGCATTTGAGCCCCGTTCGCGTCG
CTGATTGGCCGATTGAGCCTCGTAACGTTTTTCGGCACCACCAGTCGGCG
GTACATCACATCTGGGCTTCTCAGGTCGGCTGTCACCGTTTTTCGGCGCG
ACCCGTACCGCTTTCTGGCGGGATATTCCCCAGGCCGCTCGCCCAACAGC
CTTTGAAAACTCCGAATCAGTCATCAACCAAGGAAGCGACGTCACCTAGT
TACAGAGCCCCCCCGACCCTTTGTCGGTGAATAACCTCTCGGCACGTCCT
CCGCGCATTTTCTCTGCACCCGACCCCTTCGGGACCTTACAGCTTGCTGA
AAGCTGACGCGTGCTTCTGGGTTGCTCTGCAAGAAGCTGGCAAGAAGGCC
AGAACAGTTATCACTGCTGCTGCTGCTGTAGAACCAGAACAACAGCAGTA
CACCAGACCATGTGAGAACGCGACTCACACCCCCGGCACAAACACACACA
CCGTGACCGCCGCCTGCCGTGCGAGGCCCCGAAGAATGACCGTTGCCATT
TTTGGCCACAAACAACTCGCATTGTATCCGGACCTACCAATACGTACGCA
AAGCAGGTAAAAATATCATACATGTATACGTGCATCCGAGCCTGCCAAAT
CAGGTGCGTGTCATCGTTCGCGTATTGTATGCATGTGTGTGCTTGTTTGT
TTGCGGGTGCGCGAGTTTTCCCCGTGGTCGGTCTTTTATTTTGGTAAGGG
GCAGCACCGTTGGGTGTGTGTCTGTGTGTGTGTGTGTGTTTGTGCCGGGG
GTGTGAGTCGCGTTCTCACATTGTCTGCTGTACTGCTGTTGTTCTGGTTT
TACAGCAGCAGCAGTGATAACTGTTCTGGCCTTCTTGCCAGCTTCTTGCA
GAGCAACCCAGAAGCACGCGTCAGCTTTCAGCAAGCTGTAAGGTCCCGAA
GGGGTCGGGTGCAGAGAAAATGCGCGGAGGACGTGCCGAGAGGTTATTCA
CCGACAAAGGGTCGGGGGGGCTCTGTAACTAGGTGACGTCGCTTCCTTGG
TTGATGACTGATTCGGAGTTTTCAAAGGCTGTTGGGCGAGCGGCCTGGGG
AATATCCCGCCAGAAAGCGGTACGGGTCGCGCCGAAAAACGGTGACAGCC
GACCTGAGAAGCCCAGATGTGATGTACCGCCGACTGGTGGTGCCGAAAAA
CGTTACGAGGCTCAATCGGCCAATCAGCGACGCGAACGGGGCTCAAATGC
CCAGGTGTATTTTGGTGTACCGCTCTGTGGCGCGTAAACCAGGCGGTATA
CCGCTTTTTGGCGCCTTGCACTTTTTTTAATTGTTTTGTCAACTGAAAAT
TGTTCGTTTTATTTTATTTTATTTCTTGGGGCGGTCTCGTCGGGACGTGG
GGATGGAGTCCGGGATGGAAACAACAAAGAAATCCCGAACTAACGAACGC
GATGGAGCCTGTTGTTACGGCATTGATTATTGATTATAAAAGAAAACACC
GCACCAGCAGTATCCAACACGAGCAACACCCAGACAGCAGTCTTCCAACC
ACCGCAGGGCCTGCTGCATGCATCCTGCTGTGCCCCAGATTGACAAAATG
TAGGTTGAGGGCTACAACAGTGGACAAGAATGCGCTAAAAGAAAGCGCCA
TTCCTGAATCGTTTTGATTTCATTCGGGTATGGGAGAGTAAGGCCTGTGA
TGACTAGACATCATGTCGCGATATTTGAGAGCAGGAGACAGCATCGCGAT
CATCGGTTAACTCTCCTAGTCTCTCCAGGGACGCTACCAGCCTGTTGCGA
GACCTTGTTCGTGACCCTGGCTGAATAACTGTGAGGTGCTCACATGTCAA
TTTTCTCATGATTTGTGCACGCGGAGCCAAGAGCTGGGTTTGTGTCTGGT
TCTCGGGCGGTGGAATACCGGCTGGTTCAGTTTTTTTTAGAACCCGGGCT
GTTCGGGTTGCCCCGCCGAAATAGCCTGGTCCCAGAAGGGTTAACACAGG
TATTCGATATCACATATCGAAGTACGAAGTACGAAGTACTTCATACACAG
CAGTACCTGGTGCTGACTACTGCGCTACCGCTGCACTTCGAGAATTACTT
CGCTTCGTACATCCAGCAGCGATACAAATTGCTGGGACACTGCAGCACAG
ACAGTGTAAAGAGTGCGACACTATACTGTATCATTGGGCGGTTGCGTTCC
TTACAAACACTTCGAAGGGTATGATAAACGAAGTTCTACATTCGTACTGG
ATTCTTCTGTACGTATCGTAACCTACAGCTTCGGAGTATTTCGGAGTTTC
TGTGCATAACATCATTTGCGACACTGCTGCACCCCCGGTGTATCTGTCTT
GCCCATTTTATTCACAACAGCAGTACCTGTCCAACAGCTTTAAGGGGGTC
CCGTTGACTTCAAAAACTTGGAAGTCGGTTAATTCGGGCTGTGGAAACCC
CTTTACCCCACTGCCTGTCACGAAGCACAGTAACACCACCAAGGCACCGA
GAGGAGCCTGCAGGGGGTACAGACCCGCATGCTCCTTGACTCTCTCACTT
CTGCGTTTCGTTTCATCGAATTGCAGCACCGACGAAGAGAAATCAAGCGC
CGCCTCGAAAGTTCGGTTCTCTCCTGAAACATAAATCAAGACATAGGCAG
AAATATGCCAAAATGGATATGCTGTTGCACCAGGGCTCGCCATATGTGTG
TGTTTCGGGCTCATACCATCGGCCATGTGTCCTACGGCATTCGCGTCACC
GCCGAGAAGTTCCTGTGCGCGCGTGTGTTTTTACTACAAAGAACAACAGA
ATGCGGCGCAATAGGCTTTCGGGTACCCCGATGGCAAGCTGGAGCGTCGA
GATCTGTGTATTGTTCTGTAAAGTGGCGCCGGATGGGTTAGGCTATGAGT
CAGGCGTGCTGTGTCAAAAATATGAGGCAATCCATAAACCACAGCATATG
TTACAGCGATTCTAGCGAAAATTTTGTTTGCATTATCTCTTAGAGAGTTA
TCGTACGCCGATGGCGTTTTTCGTGATTTCGCAACACAAATGCCATGTTT
CGTCGACGACCCCACAAAAATCTTCTCACACAAGGCTCTGTGTAGCAAAG
AGAAAGCACGAGACTGACTAATAATGTCTCGAAAGTTGTCGTAGATGCCG
TTTCACTAAAAGGACCGCCTTCGCAGGAAAATTAAGTGAAGTAGGAATTG
GAGAGGGGGGATTACGCAACCCTAACCCTAACCCTAATCCCAACGCCGAA
CCCCCCACTAATTAATTTCAACTAAACTTAATTTGTTTCAAACCCTGCGA
AGGCTACTGCGCTAAAAACACCCGTTTGCCCGAAAATCAGCTGATTTGAA
GCAAATATTTTCCAAATAACTATTTTTTTCTCAAATATTTTCTTCTTGGC
GCCAACGTCTTCAAAAAATCCACCAACGGACAAAAAGCATGTCAAATTTC
CTCACCTCTAGAGAACCCCCTTAAGTACAGTAGTAGTACTTCGGACTTGG
TGTTCAGACACACTTACCTCTACCGATAGCTGGCAATAGACAACGGCCAT
CGTTCAACGTTCACCTTCGACCCACCCACACTTTCGCACAAGAAGTGACG
CCCGTGCGAGCCCAGGTTACCAAATAAATTAACACCTAATGCTTTATGAT
ATTGCACAGCTGTTATCAAGAAGCATCATGCTTTTCCTCGTTTGTTAATG
ATGATGTCAATGGTGCCACACACAGCAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGCAGCGCCATTGGAACATCTGCTATATTTGATC
CGGAGAGGTGATATTAGCGTCCAGCAGCAGTGAGCGAACGTAACGTGATA
TTCAGGCATGGCGTTATTTCATGTAGCACCTATCGTTCTTTATGATACTA
CTGCTGTATTTCCTGGACGGATGGCGCCCAACACCCGTTGCTGTTTCAGA
TTGGCAGCCAAGAACTCGGTGACTCCTGATCGTTCAAAATTGATGTATCG
TGCCATGCGACATGTGTCGCATATACGATGTGATACTGCCTGCTGCTTCA
TGAATATCGTAGGGCACAAATTGTGGCGCGGTAATTAGAAACCGTGCACG
AGAATCTACCAGTACTTGGTATCACACGTGCTACCGGAGACGCAGGAACT
CACGACCCGAGGCTAGCGGCCAATCTGATCTAGAGAGGGACGAAGACTAT
GACGTGTTTGTGCGTGAGAAAATAAAAAATGGGAACTCAGGAACCCCCAG
CATACTTTTATATCTCTCACCAGGTGTAATCTTGTGTGACTAAGGTGTAA
CCTTGTGTGATTAAAATCGTCTCATACGTATGAGATTGATTTTGCCCCCA
TTTCCGACCGAGCAGCGAACCCCCAAAACGGCTGCATGTTTTTCCTTTGG
AACACAACACACATGACAACATCAATCGGTGCTCGGCCCTTATCATAGCA
CACCAATCGCGACCAAACCTTGTGGGGGCATACGCTCCTGTACTCTTGAG
CTTTGGGACAACAAGTGTGTAAGTTGTGGGGGTTCTGTGTATCGAGAGGT
TTCGGTTGACAGGGTGGTACTCTTGGCTTTGAGACAACAAGTGTGTAAGT
TGTGGGGGCTCTGTGTATCGAGAGGTTCCGGTTGATAGGGTGGTACTCTT
GGCTTTGAGACAACAAGTGTGTAAGTTGTGGGGGCTCTGTGTATGGAGAG
GTTCCGGTTGATAGGGCGGTCTGAGCTACAACTTTCGACCGCAACTTTCG
GTTGGCGACCTGACCGTATTTCCCCATAAAATTCGGCTGGAGCACCGACC
GAAGCTTGTGATGGGGGAAATTTTAGCTCAAACCACTCCACTCCGCCAAC
GAAACGTCCCGACACACATAGCCCAAAATCGACGCACTTTGGTTGGTGTG
CCCAGGTTCAGAACACAGAAGCGTACACACGCCCCAAAAGGTTTCGTCGC
GATTGGTGTACTATGATAGGGGCCGAGCACCGATCAATGTTGTCACGTGT
TGTGTCCCAATAAACAAAACCTCAGGCTTGCACGAAAATGTTTCGGGTCT
TCCCGAGGAACGGGACTGTCATGTTGAGCCTGATACCCTCCAGGGGAGTT
GCGACGGTATGTTATTTGTTGAGTTGTACCATAGAAAACAAGTAGATGTA
TCACACTCTTGTGTTCGTTGCTAATCTCGCTGGATCCTCGTCTAGAGAGA
CGAATACATTGATGTCTTTGTAAGAAAATACATAAACATATACTTCCTCT
GTATCATAAGTCTGTGCCGTTATGTTTTTACGCCCCCTCAACGGTGTCCG
ATGTCTTCGGCGATAATTTTTTCGAAATCTTCGGAGTTTTTTGGGCTGAA
ACACATATACCAGGTATATATTTTTCTTGCGCACTACCCTGCGCATGGGC
TAGCGGCCAACAAAAAAGTAGTCAGGCCAAAAATGGCCGTATTTAACCCT
TTCCAGAGGTGGAGTGGGGGGCGGGGGCAAAAAAAAAAACCAATGCAATC
CCCCCCAAAATTATCCCTAACCCTGAACCTAGCCCCCCTACCTCAAAGAT
TCATGTCGAGTCCCTCCTTACTCAAATCAGTATAATAGTGACGCGACGCT
AAAACCAAGACACTTGGGTTTGCCACACTAAAATGAAGATACTTGAGACT
CATGCTCTAAATCCAAGACATCTGGCGGAATCAAAATTCTTTAAATGGGC
CAAAATGGGCATATTTTGACTTCATTTTAGTATAAACAACTGGCTTTTTT
TTTGCTTTTTGTTTTGCATCAGCTTCTTTAAGACTTCATCTTTCGAACGA
ACCTAACTATAGGATGATCGAAACAGTATGGATGCGCAAACAATTACGCG
CCCATAACGGCACAGACTTATGATACAGAGGAAGTATATCATGCGAAACA
AAACAAGTACCAGGTATACATATGTCACCAATTGCCGACCTGCCACAAAC
CGCTCTCTTTACCCCTTCCCCGTCAAAGTCCGAACAAAGTTAAGAGTGAG
AGAAACACTCTTGCCAACCAGAACTTCAGTGACTGATTTCGTCTGCTCCA
CCTTGCAATGCGATTGCCGGCTGCGGTACAGCGGTCTTGGGCAGCAAAAG
CGGCTTGCTGCCTCAGCAGCTCTGTATCGCGCTCTTCCTTCACTCCCTCC
CTCTCTCTTGGCAGCATCCTACAATACTCGGAGTGTATTCATGCATGTTC
CAGCATACGCAAAGGCGGGGGAGACAACAACAATCATACGAAGTAAAGCC
ATACCGTAGAGAAATGTGGGACGCAAGATAGCTCTCGACAATCGGATATG
GGATGGATTGTAGGTGGACAGACACCTGTGGGATGTGGGACGGGAAAGAG
AGAGAGAGAGAATGGCGAAGTCGGGCGTGGGAATGGGAAGCGAGGCGGGC
AGGTAGTGGCGTGGGAAGAGAGTGGGGAGGGAACAGCAGTCCGTGCTGAT
GCGGGACGGTAGATGATGTGGGAACAGGTACTTGCAATGGGAACGGTCGG
GAAAATCCTCAAGTCCCGTGTTCCCCAGTACCGCCCCGACTACTTCTTAC
CGCGCGGGAGCCTGCAAAATATGTGGCCGTTCGGGGGTTCTCTGCTCGAT
CGGAGACAGGGGAAAAAAAAAATATATATATATATATGGCGAAAAAATCA
GCCTCGATAAGAAGCGGCCTTAACGCACTGTGCGGGTGTGACGCAAAAAA
AAACAAAACGGGGGGTAAGATTGTGGCAACGCCCAAAATCATGGTTTCGT
TTCAGCTGCACATGGTGCAGACACATATCGTGCATATTTACATACATGTG
TATCCTGTATACGCATCGATACATACATGCTTGAACACACAGCAGTGCCG
TGGTCGGTCTGGGCTCTGAGCTCTGGTTGGGAAGCTGCTGATTGGTTGGC
CCTGGTTTTGTTTGTTTCCAGTTTCTGTTTTTTCGGGCCTGTATTTCTGT
ATTTGTAACTCCGGCCACCACAGAAGGTACCCCAACGGTACTTTATCTGA
TTTTGTTTTGGGTGAGGCCACCGTTTATTGTTTGTTTCTTTTACTTGTAT
TTTTTTCCTCCTAGCACGATTTTTGCCCGGTTTGTGACCACGGGCTAGAC
TTTGGTGGTGAGCTAACGTGAGAATCAACAAGAACAAAATACACAATGAC
ATGCAGACTACGATACCTGCTGGTGCGTGTCCGTCTCCCACGCATTCAAT
GCATGTGCTCCCCCGTCCGCCTCCTTGCTGGCACTGCTTTTTATTTCGTC
AACAGAACGACAGTCAGTAGCGTCATCAGCCTCCTCGTCCTCGTCATCAT
CATCATCATCATCAGCGGCATCTTCCCGACGGCCTTTTACGCACGAGATA
CCCCCGCCCGCATCGACGAGAAATCAGCAACAACAGCAGCGGTGTGCCAA
CGTTGCGGCGGCAGACGAGGCGACGCCCGCCGCCACCGCGGAACGCGCGA
GAGAGGTGGTTGTTGTCGGAACCTCGTCGTCTTCGTCCAGCAGCAGCAGC
AGCAGCAGCAGCAGCGGCAGCCCGACGTCTTCGTCGGGGCGTCTCCTCGC
GTCTCCCTCAACGTCCTCGTCGTCGTCTCGAAGAAGCAGCAGCGGTACCT
TGTCCGCCTCGCCCCCGGCCCCGTCGTCGCCGTTGCTGCCGCTTGTTTCT
CCGAGAGGCGGCGGCGGCGGCAGTGGTGGCGGTAGTGGGGATGTTCTTGT
TGTTGTTGTTCGTGGGGATGGGGAAACTAGCGGGGATATTGTGACCGCAC
CGTGTGGGGCGTTGGAGCCGCCCCCCACACCAATCAACGGTGGCGTCGTT
GTTGCCGCTGCCGTGGCCGCTGCCGCTGCTGCGGCGCCGCCGCCGCTACC
CCGAGTGCTGAACCCGCCACATGCTAACGGTAGCTGTAGCAGTGGCGACA
GCGGCGGTGTTGGTAGCTTTGGTCGGAAATATGCTGCGGGGACCACCTCC
ACACCTGCCTCTATCTCTGCCGCGATCGATATCCCTGCGACACCATTGCC
TTCGCGAGAGGTCGAGAAGCAGAAGGCGGGCGTTGTTGCTCCGTCCGAGG
ATCTAGTTACATCATCTTCATCGCCATCATCGTCATCATCAGCAGCAGCA
GCAGCAGCAGCAGTAGCAGATGCAGATGCAGATGCAGCAGCAGCAGCAGC
TGGAGGCGGTGCCGCTAGAACAGTCGCGTCTTGTTCCGCCACCGACAGCG
CGGGCGCCGCGGTCGCCTCCGTGCCGTCCTCTACTACCGCTCACTCCGGG
AGCTGTGGCAACGGCAGCGACGCCGGTAGGGCGTGCAGCAGCAGCAGCAA
CAACAAAAACAGCAGCAACAGCAACAGCAACAACGACGACGATGCAGCCT
CCGAGAGGCTGTCGCGCCAAGTGGAATCTCTCCTGGCAAGGGTGGAGTTC
TTGGAGAAGCGGCGATCGTTCGAAGAGGCGGGCTGGGGGGCAGGAGGAGG
AGGAGGAGGGGGAGGGGAACGGGGGAGGTCTCAGAGTAGTAGCTTCGCTC
TCTTGAACCACCGGCGTGAAGGAGGCGCCGGTTCTGATCTTGGGCTTTTG
TCTGAAGAGCGCTCGGGAGGGGGCCTCGTGGGTGGTGACCGCCGCGAGCG
GGAGGTGATGGTGACGCCGCCGCCACCGAGGATCAGGGTTCGCCACGGCA
GCGGGGACGGGCACCACGCGGTTGGAGTTAGTACGACGCCGTACACTGGG
CTCGACGTCCTATTTCGCACCCCGAAGGTGTGTGATGTAATTTTCAAGGT
TTTTCAAGTTTTTTACTTTCAGGATGGAGGAGGGTGGATCAATCGGGCTG
AGGGGAGAGGAGGGCCGTAACCTCTGTCTTCTGTCTGTCTGTCTGTCTGT
CTGTCTGTCTGTCTGTCTGTCTTGTCTGTCTGCTCCGGGTAAATAATTTT
AGCGTGTGTGTGTGTGCGCTGTGTGCGCGCGTGTTTGTGTGTGTCTTTTT
TTTCTGTTGCTGCTGTTTGATGACTGCTGCGTGCTTTTTGTTCTCTTTTA
CTCCGTTGTTGTCGCTCCCCCTGCGTATGTGATGCGTATGCATGCTGGCG
CGTGTGTGTCCGCGTGTGCGTTCGTGCGTGTGTGTACGTGCGTGCGTCTT
GAGACTGGTTCTCGAAGGATCTTTGGTTTTGACTCGCACAGAGTTGTTGG
TTCAATTCTCTTCTCTCCTTTCCTCCCTCTTTTGCTCTCCTTTCCTCCCT
GACTCGCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCCCTCTCT
TCTCTCTTCTCTCTTTTTTTTGTGTTACTCCCCTTTGTCCCCGCGTCCAC
CCCCCCCCTCCACATCCCTGTCAGCAACAGCAAGACAGCCCCGAGCAAAG
CTCACGCCGCCAACACCACCACCATCTACACCACCAGCCAACCCTGTCTC
CCAGCCGGGGGCATACTCGCTGGGCAGACCCCTTTTTCACAACCACCACC
ACCTCCAACACCAACACCAACGACGGCGACCGACCCCGATCCCCGCAAAG
ATCCCGCCTCACCTGGTGCGCCGGAGAGGGGCAGGGGTCGATCGAGGCCC
GGGGGGGCCGAGCCCCTCCAAACTCTTCGGGGATGGAAGGGCCGGAATCC
CCCCCCCTCTACAGCCTCGGGGAGAGGGCGGGGAAATGGGCGCTGGAGGC
GCCGGCGTGGCCTTCTGATCCCAGGAGCGACGGCAGGAATTTTCCGCGCG
GGGGAGAGGGGTTCGATTCTCGTCCGCGGTCTGCGACGGAGGGGCTGGCA
GCCGGG

Coding sequence (CDS) from alignment at P-littoralis_Contig208:32905..46210-

>mRNA_P-littoralis_Contig208.6.1 ID=mRNA_P-littoralis_Contig208.6.1|Name=mRNA_P-littoralis_Contig208.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=552bp|location=Sequence derived from alignment at P-littoralis_Contig208:32905..46210- (Pylaiella littoralis U1_48)
ATGGTGACGCCGCCGCCACCGAGGATCAGGGTTCGCCACGGCAGCGGGGA
CGGGCACCACGCGGTTGGAGTTAGTACGACGCCGTACACTGGGCTCGACG
TCCTATTTCGCACCCCGAAGCAACAGCAAGACAGCCCCGAGCAAAGCTCA
CGCCGCCAACACCACCACCATCTACACCACCAGCCAACCCTGTCTCCCAG
CCGGGGGCATACTCGCTGGGCAGACCCCTTTTTCACAACCACCACCACCT
CCAACACCAACACCAACGACGGCGACCGACCCCGATCCCCGCAAAGATCC
CGCCTCACCTGGTGCGCCGGAGAGGGGCAGGGGTCGATCGAGGCCCGGGG
GGGCCGAGCCCCTCCAAACTCTTCGGGGATGGAAGGGCCGGAATCCCCCC
CCCTCTACAGCCTCGGGGAGAGGGCGGGGAAATGGGCGCTGGAGGCGCCG
GCGTGGCCTTCTGATCCCAGGAGCGACGGCAGGAATTTTCCGCGCGGGGG
AGAGGGGTTCGATTCTCGTCCGCGGTCTGCGACGGAGGGGCTGGCAGCCG
GG