prot_P-littoralis_Contig208.46.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig208.46.1
Unique Nameprot_P-littoralis_Contig208.46.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length99
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig208.46.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 35..56
e-value: 4.9E-6
score: 26.3
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 30..58
score: 11.704078
NoneNo IPR availableGENE3D4.10.1000.10coord: 34..60
e-value: 1.5E-5
score: 26.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..99
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 34..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig208contigP-littoralis_Contig208:260716..261024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig208.46.1mRNA_P-littoralis_Contig208.46.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig208 260716..261024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig208.46.1 ID=prot_P-littoralis_Contig208.46.1|Name=mRNA_P-littoralis_Contig208.46.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=99bp
QAGGLINSTVQAPRPAARGFHGGAAGPRGGARRGTCRQFDRTGDCRFGSR
CVFTHVHNVSRGSPKRKAAGDGGAGTSGGSHKESKGAAPAPVVKKTKDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf