prot_P-littoralis_Contig208.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig208.30.1
Unique Name	prot_P-littoralis_Contig208.30.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	240

Homology

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BLAST of mRNA_P-littoralis_Contig208.30.1 vs. uniprot
Match: D7G531_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G531_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 1.730e-19
Identity = 62/120 (51.67%), Postives = 70/120 (58.33%), Query Frame = 0

Query:  117 GRNREVLERGRGSSAGDRPRSLHHLDRRQYAEERRNFPEEHAQFRERGQG-SSPQVHGMIGGERLTPLRGFEDVAPAVSQQXXXXXXXXXXXXXXXXXXPSSYPREHRTNSDGTLVHSYL 235
            GR+R+ LER  G  +GDRPRSLHHLD  Q AEERR F EE  Q RERG G S+ +VHGMIGGERLTPL GFE+   + S                    P SYPR  R  SDG +  S L
Sbjct:  479 GRDRDPLERAAGGWSGDRPRSLHHLDGGQLAEERRRFAEE--QVRERGPGGSTARVHGMIGGERLTPLSGFEESDASASHARRFYQEQQHQRQYH----PHSYPRMQRARSDGLVAESVL 592

[Close]

BLAST of mRNA_P-littoralis_Contig208.30.1 vs. uniprot
Match: A0A6H5KAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAZ7_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.350e-17
Identity = 58/119 (48.74%), Postives = 70/119 (58.82%), Query Frame = 0

Query:  117 GRNREVLERGRGSSAGDRPRSLHHLDRRQYAEERRNFPEEHAQFRERGQG-SSPQVHGMIGGERLTPLRGFEDVAPAVSQQXXXXXXXXXXXXXXXXXXPSSYPREHRTNSDGTLVHSY 234
            GR+ + LER  G  + DRPRSLHHLDR Q AEERR F E+  Q RERG G S+ +VHGMIGGERLTPL GFE++  + S                    P +YPR  R  SDG +  S+
Sbjct:  484 GRDGDPLERAAGGWSEDRPRSLHHLDRGQLAEERRRFAED--QVRERGPGGSTARVHGMIGGERLTPLSGFEELDASASHARRFYQEQQHQRQYH----PHAYPRMQRARSDGLVSSSH 596

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig208.30.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig208.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G531_ECTSI	1.730e-19	51.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KAZ7_9PHAE	2.350e-17	48.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..69

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig208	contig	P-littoralis_Contig208:154793..156010 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig208.30.1	mRNA_P-littoralis_Contig208.30.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig208 154793..156011 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig208.30.1 ID=prot_P-littoralis_Contig208.30.1|Name=mRNA_P-littoralis_Contig208.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=240bp
GGGGSGGSGGTSTSGRGMVQIGDDHQWEDARRGGHQTALVGRPGSSSGRS
SPFVDDSAWMQQQQQQQDPSNDRRRLHGGSGGGGGGGGVGAGDQHQHQHQ
HQHQHLLHLHSGMQNRGRNREVLERGRGSSAGDRPRSLHHLDRRQYAEER
RNFPEEHAQFRERGQGSSPQVHGMIGGERLTPLRGFEDVAPAVSQQRHHH
NLLRQHQQQLQQQQPSSYPREHRTNSDGTLVHSYLQSQPL