prot_P-littoralis_Contig207.44.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig207.44.1
Unique Nameprot_P-littoralis_Contig207.44.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length527
Homology
BLAST of mRNA_P-littoralis_Contig207.44.1 vs. uniprot
Match: D8LFJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFJ5_ECTSI)

HSP 1 Score: 606 bits (1563), Expect = 5.600e-212
Identity = 337/506 (66.60%), Postives = 388/506 (76.68%), Query Frame = 0
Query:    1 MKR-RCITMNTLVVFSSFAAVSLAFQTAIRLAPNTRQRSTHASGSSLDTRLNLPSAARAFSPSNGH----------TRGGXXXXXSIAMMARSNRLKSVIARQKNLDRRNAPVILSDKAKRKAKRERRAYFRERYACSGRRLIKLQQEDPDSFYIGFVGTNLAGRAQALVAVQAYLRRATELKVAKYFKGDANIKLVDAGNMRLTDMKGKDEHKLGLLRRCDLLVHVVRCFDLFEPKPQHQRRGGKAEEDAEGGSESVEAEDASVSWLSNVGGGLEQEAEDWKELEKHIDWPLLPTPLDDVRSTRAEMALTDLRFIEERQKTNHTKWFWRNRSRALNEKTAIDLVVPVLEDAYTVGGELKPVGLGFRDSCLKDEPGTNGTTLYRSKKRAAIEEIGFLTPKPIVYVANVPAEAAPSSDXXXXXXE--KPADVSESAQAISKVALAHADTVVSLRRDYGVPAVVGCLRNAEGQNALGAAVFKAIPRRVLSRDPKLKKAANSAARKTSQ 493
            MKR RC+ + TLV+   FAAV+LAFQTA+RL+      ST    +  D RL    + RA  P++            +R G      + MM RSNRLK+VIARQ+NL++  APVILS+KAKRKAKRERRAYFRERYACSGRRLIKLQQEDPDS YIGFVGTN AGRAQAL AV+AYL+RATE KVAK+ KG+A IKLVDAGNM L++MKGK E KL LLR CDLLVHVVRCFDLFEPKP    RG   EE+   G E  EA   +   LSN+GGG++Q   D +E+E+ IDWPL PTPL+D++ TRAEMA  DL+FIEER KTNHTKWFWRNR+RALNEK AI LV P+LEDAY  GG L+PVG GFR+SCL+DEPG NGTTLYRSK+RAAIEEIGFLTPKP+VYVANVP+EAAPSSD      +  +P + SES +A+ KVALAHAD VVSL+RDYG P VVGCLRN EGQNALGAAVFKAIPR  LSRDPKL+K+ANS  RKT Q
Sbjct:    3 MKRCRCVAIETLVMLC-FAAVALAFQTAVRLSAGD---STAPPAACSDGRLTA--STRALIPNSYRPARWCCTRVASRDGGNKNSRVVMMGRSNRLKTVIARQRNLEKSTAPVILSEKAKRKAKRERRAYFRERYACSGRRLIKLQQEDPDSLYIGFVGTNGAGRAQALGAVEAYLKRATEFKVAKHHKGNAKIKLVDAGNMCLSEMKGKGERKLSLLRHCDLLVHVVRCFDLFEPKPFKPWRGAGREEEDRPGDEVDEA--PATQLLSNLGGGVKQGGGDGEEVEEEIDWPLSPTPLEDIKETRAEMAYADLQFIEERHKTNHTKWFWRNRNRALNEKAAIALVTPLLEDAYASGGVLEPVGTGFRNSCLRDEPGENGTTLYRSKRRAAIEEIGFLTPKPVVYVANVPSEAAPSSDEDDDANDDAEPKEASESGEAVRKVALAHADKVVSLKRDYGAPVVVGCLRNPEGQNALGAAVFKAIPRDFLSRDPKLRKSANSPRRKTQQ 500          
BLAST of mRNA_P-littoralis_Contig207.44.1 vs. uniprot
Match: A0A835YXS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXS7_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.910e-44
Identity = 146/428 (34.11%), Postives = 204/428 (47.66%), Query Frame = 0
Query:   76 IAMMARSNRLKSVIARQKNLDRRNAPVILSDKAKRKAKRERRAYFRERYACSGRRLIKLQQEDPDSFYIGFVGTNLAGRAQALVAVQAYLRRATELKVAKYFKGDANIKLVDAGNMRLTDMKGKDEHKLGLLRRCDLLVHVVRCFDLFEPKPQHQRRGGKAEEDAEGGSESVEAEDASVS-----------WLSNVGGGLEQEAEDWKELEKHIDWPLLPTPLDDVRSTRAEMALTDLRFIEERQKTNHTKWFWRNRSRALNEKTAIDLVVPVLEDAY------TVGGELKPVGLGFRDSCLKDEPGTNGTTLYRSKKRAAIEEIGFLTPKPIVYVANVPAEAAPSSDXXXXXXEKPADVSESAQAISKVALAHADTVVSLRRDYGVPAVVGCLRNAEGQNALGAAVFKAIPRRVLSRDPKLKKAANS 486
            + M AR+  L+S    QK    R A      ++ R  KRE R   R R   SG RL +L+++   ++YIG +G N AGR  A+ +++A LR+ TELKV K F   A+++++DAG M L DM  +D  +   LRRC+L++HVVRCF   E  P  +    + E+D    +E+V      V                                      L PTPL+D   TRA MA  DL  I ER K NHT  FWR R RA+NE  A+  + P L   Y       VGG L+P G  F  S L+D    +G  L+  ++R AI  +GFLT K  ++ A+  A  +          E   D   +A A           V  +   +G+      L+ A+G  AL AAV  A+P+ +L+RDPK +KAA S
Sbjct:   46 LHMAARAKDLRS---EQKRQGLRLAKGGRPPRSVRALKREGRREHRARMGGSGTRLKELREDK--AWYIGVIGMNGAGRGLAVKSLEAALRKQTELKVGKEFVR-ADVRIIDAGRMPLDDMPTQDPGRFAKLRRCNLMIHVVRCF---EAPPAPEPTAAQEEQDLSTAAEAVVPRSRRVPSKLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVLLPPTPLEDALRTRAAMAYADLHIIYERSKVNHTAAFWRVRQRAINEMAALRRIEPELARIYLKASDRAVGGILQPAGDEFSASVLRDSK--DGKHLHE-RQRWAIRPLGFLTCKRTIFCASTSAGGS--------NGEGRGDSERAATA----------AVTEMAEKFGLLCAEAALQAADGGEALAAAVVAAMPKSLLARDPKRRKAARS 443          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig207.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFJ5_ECTSI5.600e-21266.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YXS7_9STRA3.910e-4434.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 182..420
e-value: 2.1E-9
score: 39.0
IPR023192TGS-like domain superfamilyGENE3D1.10.150.300coord: 287..390
e-value: 2.1E-9
score: 39.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..526
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..516

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig207contigP-littoralis_Contig207:228367..233418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig207.44.1mRNA_P-littoralis_Contig207.44.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig207 228308..234232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig207.44.1 ID=prot_P-littoralis_Contig207.44.1|Name=mRNA_P-littoralis_Contig207.44.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=527bp
MKRRCITMNTLVVFSSFAAVSLAFQTAIRLAPNTRQRSTHASGSSLDTRL
NLPSAARAFSPSNGHTRGGGGGGGSIAMMARSNRLKSVIARQKNLDRRNA
PVILSDKAKRKAKRERRAYFRERYACSGRRLIKLQQEDPDSFYIGFVGTN
LAGRAQALVAVQAYLRRATELKVAKYFKGDANIKLVDAGNMRLTDMKGKD
EHKLGLLRRCDLLVHVVRCFDLFEPKPQHQRRGGKAEEDAEGGSESVEAE
DASVSWLSNVGGGLEQEAEDWKELEKHIDWPLLPTPLDDVRSTRAEMALT
DLRFIEERQKTNHTKWFWRNRSRALNEKTAIDLVVPVLEDAYTVGGELKP
VGLGFRDSCLKDEPGTNGTTLYRSKKRAAIEEIGFLTPKPIVYVANVPAE
AAPSSDSDDDDDEKPADVSESAQAISKVALAHADTVVSLRRDYGVPAVVG
CLRNAEGQNALGAAVFKAIPRRVLSRDPKLKKAANSAARKTSQPRKKPQQ
RQQLVRASSPPPGTADTASAVGSVAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR023192TGS-like_dom_sf