prot_P-littoralis_Contig207.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig207.30.1
Unique Nameprot_P-littoralis_Contig207.30.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length440
Homology
BLAST of mRNA_P-littoralis_Contig207.30.1 vs. uniprot
Match: A0A6H5JU28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU28_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 5.120e-116
Identity = 252/428 (58.88%), Postives = 287/428 (67.06%), Query Frame = 0
Query:    1 MSSGSLEPIPDIVVWVNSTLGRQNVPISQPTGRL-TAVPFRTMGSFIEGPAVAIDIPEMERHNMSLAECEQCALDDFWGMVANQVEQAQATAAMEREDQRSQDIRARIKKEERYTLWDQEDLRKRETRGVVKENLEDTARREYLE--IFYSAPSVDIAMNYTWPTRPSL-GQAWDQQTSDSLAGETGVTLTVTGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTTRTSRNTNNDWSTGSVSGDAVEESSSMRPFHAFRGKKTHQIIPVNNCFIPPRHISESTPKHGIVSAHGLATPAQHLAG------DGTSPGRDFPHITSTTPSGISKAVHLPPMVEVPRDGRPARGLTGSNTTDGVTGESFSFNQRPLTGETQPIVSSFERKLAARRKQWSREAEVEAEERAFLEQTRAQELLRGLRSFHDG 418
            MSS S E + DIVVWV++TL  Q+  IS P     +  PF  MGSF EG A AID+ EMER NMS AE EQCALDDFWG+VANQVEQA+ATAAMERED  S  IRARIKKEERY LW+QED RKRETR  V+E+LED ARREYLE  IFY+APS ++AMNYTWPTR SL G    QQ+S SL G+T V  T  GRG   XXXXXXXXXXXXXXXXXXXXXXXXXX                   G    E SS RPFH FRGKKTHQ+ P  +CF+PPRH+SE T KHG++S H L   A   AG      + T+         +  PSG+SKAVHLPP++E P +G PA           VTGE  S N+RP + +    VSSFERKLAARR+QWSREAE EAEERAF EQ R QELL G++   DG
Sbjct:   36 MSSESPEQLTDIVVWVDTTLRGQDPGISHPPSNPHSKFPFNKMGSFFEGAAGAIDVAEMERQNMSKAEGEQCALDDFWGLVANQVEQAEATAAMEREDLLSAQIRARIKKEERYRLWEQEDRRKRETRSAVREHLEDHARREYLESEIFYNAPSAEMAMNYTWPTRGSLDGITLGQQSSGSLMGDTEVRWT--GRGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTGMEGSSTRPFHVFRGKKTHQVFPAKDCFVPPRHLSEPTTKHGLISVHALTAGAAGAAGACPAGREKTAGPETVDPAGANAPSGVSKAVHLPPLLETPGEGWPAAVPIAGRAA--VTGEPLSSNKRPPSWQRPRSVSSFERKLAARRQQWSREAEEEAEERAFEEQWRTQELLLGVQGLDDG 459          
BLAST of mRNA_P-littoralis_Contig207.30.1 vs. uniprot
Match: D8LFK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK6_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 8.030e-116
Identity = 229/431 (53.13%), Postives = 272/431 (63.11%), Query Frame = 0
Query:    1 MSSGSLEPIPDIVVWVNSTLGRQNVPISQPTGRL-TAVPFRTMGSFIEGPAVAIDIPEMERHNMSLAECEQCALDDFWGMVANQVEQAQATAAMEREDQRSQDIRARIKKEERYTLWDQEDLRKRETRGVVKENLEDTARREYLEIFYSAPSVDIAMNYTWPTRPSL-GQAWDQQTSDSLAGETGVTLT---VTGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTTRTSRNTNNDWSTGSVSGDAV---EESSSMRPFHAFRGKKTHQIIPVNNCFIPPRHISESTPKHGIVSAHGLATPAQHL----AGDGTSPGRD-FPHITSTTPSGISKAVHLPPMVEVPRDGRPARGLTGSNTTDGVTGESFSFNQRPLTGETQPIVSSFERKLAARRKQWSREAEVEAEERAFLEQTRAQELLRGLRSFHDG 418
            MSS S E + DIVVWV++TL  Q+  IS P     T  PF  MGSF EG A AID+ EMER NMS AE EQCALDDFWG+VANQVEQA+ATAAMERED  S  IRARIKKEERY LW+QED RKRETR  V+E+LED ARREYLEIFY+APS ++AMNYTWPTR SL G    Q++S S  G+T VT T    +GRGG                               ++SR+  +DW+  S S  +     E SS RPFH F GKKTHQ+ P  +CF+PPRH+SE T KHG++S H LA          AG   + G +      +  PSG+SKAVHLPP++E   +G PA   +        TGE  S N+RP + +    VSSFERKLAARR+QWSREAE EAEERAF EQ R QELL G++   DG
Sbjct:  456 MSSESPEQLTDIVVWVDTTLRGQDPGISHPPSNPHTKFPFNKMGSFFEGAAGAIDVAEMERQNMSKAEGEQCALDDFWGLVANQVEQAEATAAMEREDLLSAQIRARIKKEERYRLWEQEDRRKRETRSAVREHLEDHARREYLEIFYNAPSAEMAMNYTWPTRGSLDGTTLGQKSSGSPMGDTEVTWTGRGSSGRGGGGGESPCTTSRGGDDAGTALS--------AAQSSRDVLSDWNPSSCSSSSAGTGTEGSSTRPFHVFCGKKTHQVFPARDCFVPPRHLSEPTTKHGLISVHALAAXXXXXXXCPAGREKTAGPETVDPAGANAPSGVSKAVHLPPLLETHGEGWPAAVPSAGRVA--ATGEPLSSNKRPPSWQRPRSVSSFERKLAARRQQWSREAEEEAEERAFAEQRRTQELLLGVQGIDDG 876          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig207.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JU28_9PHAE5.120e-11658.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFK6_ECTSI8.030e-11653.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 410..439

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig207contigP-littoralis_Contig207:165359..168890 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig207.30.1mRNA_P-littoralis_Contig207.30.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig207 164872..172102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig207.30.1 ID=prot_P-littoralis_Contig207.30.1|Name=mRNA_P-littoralis_Contig207.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=440bp
MSSGSLEPIPDIVVWVNSTLGRQNVPISQPTGRLTAVPFRTMGSFIEGPA
VAIDIPEMERHNMSLAECEQCALDDFWGMVANQVEQAQATAAMEREDQRS
QDIRARIKKEERYTLWDQEDLRKRETRGVVKENLEDTARREYLEIFYSAP
SVDIAMNYTWPTRPSLGQAWDQQTSDSLAGETGVTLTVTGRGGGGRDDSS
RPTTCGSGGIGGGSDDSRSALLTTRTSRNTNNDWSTGSVSGDAVEESSSM
RPFHAFRGKKTHQIIPVNNCFIPPRHISESTPKHGIVSAHGLATPAQHLA
GDGTSPGRDFPHITSTTPSGISKAVHLPPMVEVPRDGRPARGLTGSNTTD
GVTGESFSFNQRPLTGETQPIVSSFERKLAARRKQWSREAEVEAEERAFL
EQTRAQELLRGLRSFHDGGGGGGGGGGGRRGGGAGEAPA*
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