mRNA_P-littoralis_Contig206.14.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig206.14.2 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 560 bits (1443), Expect = 6.900e-181 Identity = 334/623 (53.61%), Postives = 413/623 (66.29%), Query Frame = 2
Query: 212 APTNGHMFQTKPVSRHFLHTKEFNSNGQYGDIEKHADAYNGGGAAVVKARQLDRTDPEVLKKYGDGSYWPMAYAFDLGEKCANGNYLENDDLAVSHGVCGDTPQSGDDNPYVYSTPNSEWDTLTDYTPGEIIDIDVIVTNYHWGHFEVFLCCTADLDDPLGVAKQSCFNKYPLDRDPSDSNNSPVDSAYPGRYYLNPPCMGEQNEVDQT-RPEL-DGV--LMDGTVNHMRYKLPNIECDHAILMMRYHSGRGCKSPGYDEFEPPSWPSACAPNKVDWISTSSHSCNSEDREWGNLFWNCADITITGSVSDQS-AGAAPAPTPTPEAAXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDTK----------------PVSAPTSVVGQPTT-PDDADSSVGYSHEGCFADDAEDRVLGQKISSEDMSTAVCSEYCLAKQATYMATQFGDECWCSQEVDLAFARHTEDEESNFGLCDMMCEGNLDETCGGHDAFDLYKITGPMVSDSVEYEGCYLDDKEERLLQNEIKWQDNMTPDVCRDYCETFEGSHFYATQYGRECWCGASDDVEAYKKNGPGHCLMGCSGDPAVACGGYDSFSLFKYHD*VVP 2014
A GH F +P+SR +L +KEFN +Y +EK A ++NGGGA V+AR +D DP++L YG G W + A+D GE+C N NYLE+D +AV HGVCGD PQ G DNP YSTPN+ W ++ YT G II++ ++ N HWGH E FLC TAD+DDP GV Q C N YPLDRD +D NSP+D YPGR+++NP C GE E DQT RP L DG L +G +N RY LPNI+C+H +L M+Y++ GC PGY EFEP WP CAP+K DW+ + C+ E ++WGN+F+ C+DIT+ S A AAP P P PE XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX XXXX PV+AP V P T P D GYS+ GCFAD EDRV +S M+TAVC EYCL ++ATYMATQ+G ECWCS + ++ + RH++ G+CD C G+ + CGG DAFDLYKIT P EY GC+ DD+E+RLL +EIK Q +MT VCR YCE + ++FYATQYG ECWCG S+D E YK++G G CL GCSGDP VACGG+D+F+LFK+ P
Sbjct: 23 AAVEGHGFCIEPISRQYLRSKEFNEGDEY-YVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARXXXXSXXXXXXXXXXXXXXXXXXXXPVAAP--VYEMPVTMPVDE----GYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSD------GVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERD-AYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDGIAEP 630
BLAST of mRNA_P-littoralis_Contig206.14.2 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI) HSP 1 Score: 528 bits (1361), Expect = 6.580e-173 Identity = 289/599 (48.25%), Postives = 374/599 (62.44%), Query Frame = 2
Query: 212 APTNGHMFQTKPVSRHFLHTKEFNSNGQYGDIEKHADAYNGGGAAVVKARQLDRTDPEVLKKYGDGSYWPMAYAFDLGEKCANGNYLENDDLAVSHGVCGDTPQSGDDNPYVYSTPNSEWDTLTDYTPGEIIDIDVIVTNYHWGHFEVFLCCTADLDDPLGVAKQSCFNKYPLDRDPSDSNNSPVDSAYPGRYYLNPPCMGEQNEVDQT-RPELDGV---LMDGTVNHMRYKLPNIECDHAILMMRYHSGRGCKSPGYDEFEPPSWPSACAPNKVDWISTSSHSCNSEDREWGNLFWNCADITITGSVSDQSAGAAPAPTPTPEAAXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDTKPVSAPTSVVGQPTTPDDADSSVGYSHEGCFADDAEDRVLGQKISSEDMSTAVCSEYCLAKQATYMATQFGDECWCSQEVDLAFARHTEDEESNFGLCDMMCEGNLDETCGGHDAFDLYKITGPMVSDSVEYEGCYLDDKEERLLQNEIKWQDNMTPDVCRDYCETFEGSHFYATQYGRECWCGASDDVEAYKKNGPGHCLMGCSGDPAVACGGYDSFSLFKY 1996
A +GH F +P+SR +L ++EFN +G +E+ A ++NGGGA V+AR +D DP++L YG G W + A+D GE+C N NYLE+D +AV HGVCGD PQ G DNP YST N+ W ++ YT G II++ ++ N HWGH E FLC TAD+DDP V Q C N YPLDRD +D NSP+D YPGR+++NP C G+ E DQ+ RP L G L +G +N RY LPNI+CDH +L M+Y++ GC PGY EFEP WP CAP+K DW+ + C+ E ++WGN+F+ C+DIT+ V+D P PT XXXXXXXXXXXXXXXXXXXXX P T PV A YS+ GCFAD+ DRV +S M+TAVC EYCL ++ATYMATQ+G ECWCS + + + RH++ G+CD C G+ + CGG DAFDLYKIT P EY GC+ D+ E+ +L EIK Q +MT VCR YCE + ++FYATQ G ECWCG S++ E Y ++G G CL GCSGDPAVACGG+++F+LFK+
Sbjct: 44 AAVDGHGFVIEPISRQYLRSQEFN-DGYVHSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEP-EWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL---VADGEMPTVPEPT---------------------XXXXXXXXXXXXXXXXXXXXXEQTVAAPVYEMPVTLPVEA------------------SYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSD------GVCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLD-ANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKF 591
BLAST of mRNA_P-littoralis_Contig206.14.2 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE) HSP 1 Score: 526 bits (1356), Expect = 4.230e-171 Identity = 327/669 (48.88%), Postives = 420/669 (62.78%), Query Frame = 2
Query: 152 MPASSTSSLAAATLLVLTRV------APT--NGHMFQTKPVSRHFLHTKEFNSNGQYGDIEKHADAYNGGGAAVVKARQLDRTDPEVLKKYGDGSYWPMAYAFDLGEKCANGNYLENDDLAVSHGVCGDTPQSGDDNPYVYSTPNSEWDTLTDYTPGEIIDIDVIVTNYHWGHFEVFLCCTADLDDPLGVAKQSCFNKYPLDRDPSDSNNSPVDSAYPGRYYLNPPCMGEQNEVDQTRPEL--DG-VLMD--------------------GTVNHMRYKLPNIECDHAILMMRYHSGRGCKSPGYDEFEPPSWPSACAPNKVDWISTSSHSCNSEDREWGNLFWNCADITITGSVSDQSAGAAPAPTPTPEAAXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDTKPVSAPTSVVGQPTTPDD---ADSSV-GYSHEGCFADDAEDRVLGQKISSEDMSTAVCSEYCLAKQATYMATQFGDECWCSQEVDLAFARHTEDEES----NFGLCDMMCEGN----LDETCGGHDAFD------------LYKITGPMVSDSVEYEGCYLDDKEERLLQNEIKWQDNMTPDVCRDYCETFEGSHFYATQYGRECWCGASDDVEAYKKNGPGHCLMGCSGDPAVACGGYDSFSLFK 1993
+PA AAT +V+ + PT GH F +P+SR +L +KEFN G++ +EK A ++NGGGA V+AR +D DP++L YGDG W + A+D GE+C N NYLE+D +AV HGVCGD PQ G DNP YSTPN+ W ++ Y G II++ ++ N HWGH E FLC TAD+DDP GV Q C N YPLDRD +D NSP+D YPGR+++NP C GE E DQ+ + DG V +D G +N RY LPNI+C+H +L M+Y++ GC PGY EF+P WP CAPNK +W+ + C+ E ++WGN+F+ C+DIT+ P XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PV+A + AD V Y+H GCF+D+ EDRVL I+S M+ A+C E+C+ ++ATYMATQ+G ECWCS + DL +ARH++D E ++GLC CEG+ L +C +A + LYKIT P + EY GC+ DD ++RLL+NEIK+Q +MT VCR YCE F G+HFYATQYG ECWCG SDD E YK++G G C+ CSGDP ACGG+DSF+LFK
Sbjct: 2 VPAQHVEGRRAATAVVVIAMIVAMPYVPTAVEGHGFCIEPISRQYLRSKEFNDGGEF-YVEKWAGSFNGGGADAVQARTIDNIDPDILADYGDGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQSGRSMLNDGEVGLDHVSIMYAYQVYGTSSWRSAKGYINTGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDP-EWPGDCAPNKEEWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGKTFPTAPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQPVAASVYEMXXXXXXXXXXXADVPVEAYTHVGCFSDNKEDRVLEAMITSSAMTGAMCYEHCVDRRATYMATQYGFECWCSHDSDLDYARHSDDLERVDGRDYGLCGTRCEGDKVRILHGSCRQREALENHAMGEIRNLHYLYKITEPTEPEGEEYVGCFADDGDDRLLKNEIKYQPDMTQAVCRTYCEGF-GAHFYATQYGDECWCGTSDDKEDYKRHGHGSCVAQCSGDPTTACGGFDSFNLFK 667
BLAST of mRNA_P-littoralis_Contig206.14.2 vs. uniprot
Match: D8LED5_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED5_ECTSI) HSP 1 Score: 417 bits (1072), Expect = 4.030e-132 Identity = 220/532 (41.35%), Postives = 286/532 (53.76%), Query Frame = 2
Query: 440 LGEKCANGNYLENDDLAVSHGVCGDTPQSGDDNPYVYSTPNSEWDTLTDYTPGEIIDIDVIVTNYHWGHFEVFLCCTADLDDPLGVAKQSCFNKYPLDRDPSDSNNSPVDSAYPGRYYLNPPCMGEQNEVDQT-RPELDGV---LMDGTVNHMRYKLPNIECDHAILMMRYHSGRGCKSPGYDEFEPPSWPSACAPNKVDWISTSSHSCNSEDREWGNLFWNCADITITGSVSDQSAGAAPAPTPTPEAAXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDTKPVSAPTSVVGQPTTPDDADSSVGYSHEGCFADDAEDRVLGQKISSEDMSTAVCSEYCLAKQATYMATQFGDECWCSQEVDLAFARHTEDEESNFGLCDMMCEGNLDETCGGHDAFDLYKITGPMVS------DSV-EYEGCYLDDKEERLLQNEIKWQDNMTPDVCRDYCETFEGSHFYATQYGRECWCGASDDVEAYKKNGPGHCLMGCSGDPAVACGGYDSFSLFKYHD 2002
+GE+C N NYLE+D +AV HGVCGD PQ G DNP YSTPN+ W ++ Y G II+I ++ N HWGH E FLC TAD+DD GV Q C NKYPLDRD +D NSP+D YPGR+++NP C GE E DQ+ RPEL G L G +N+ RY LPNI+C+H +L M+Y++ GC PGY EFEP WP CAP+K DW+ + C+ E ++WGN+F+ C+DIT+ + G P +V PT P E + +C E+C ++ A YMATQFG ECWCS + DL ++RH+++ + GLC C+G +TC A D + + D V EY GC+ DD E+RLL NEIK+Q +MT VCR YCE ++ +HFYATQYG ECWCG S+D E YK++G G CLM CSGDP CGG D+F+L+K D
Sbjct: 1 MGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRAVINNNHWGHIEYFLCDTADMDDADGVVTQDCLNKYPLDRDETDWWNSPIDPNYPGRFFVNPECRGENEETDQSGRPELTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVANGEIDLQG-------NPSCTCRRTYHRDLRNNINTQF-----------------------------------------LVQIPTPP----------------------------IPEQVPLCMCYEHCYSEGAAYMATQFGFECWCSDDTDLDYSRHSDNIDGGDGLCTTACQG---DTCWRERALDACAVLVDRRALLVEEGDEVDEYVGCFADDPEDRLLGNEIKYQPDMTQAVCRTYCEGYD-AHFYATQYGDECWCGMSNDEEDYKRHGSGSCLMECSGDPGTVCGGNDAFNLYKNMD 451
BLAST of mRNA_P-littoralis_Contig206.14.2 vs. uniprot
Match: A0A6H5JMP7_9PHAE (Chitin-binding type-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP7_9PHAE) HSP 1 Score: 338 bits (868), Expect = 8.860e-103 Identity = 158/304 (51.97%), Postives = 205/304 (67.43%), Query Frame = 2
Query: 212 APTNGHMFQTKPVSRHFLHTKEFNSNGQYGDIEKHADAYNGGGAAVVKARQLDRTDPEVLKKYGDGSYWPMAYAFDLGEKCANGNYLENDDLAVSHGVCGDTPQSGDDNPYVYSTPNSEWDTLTDYTPGEIIDIDVIVTNYHWGHFEVFLCCTADLDDPLGVAKQSCFNKYPLDRDPSDSNNSPVDSAYPGRYYLNPPCMGEQNEVDQT-RPEL-DGV--LMDGTVNHMRYKLPNIECDHAILMMRYHSGRGCKSPGYDEFEPPSWPSACAPNKVDWISTSSHSCNSEDREWGNLFWNCADITI 1111
A GH F +P+SR +L +KEFN +Y +EK A ++NGGGA V+AR +D DP+VL YG G W + A+D GE+C N NYLE+D +AV HGVCGD PQ G DNP YSTPN+ W ++ Y G II++ ++ N HWGH E FLC TAD+DDP GV Q C N YPLDRD +D NSP+D YPGR+++NP C GE E DQT RP L DG L +G +N RY LPNI+C+H +L M+Y++ GC PGY EFEP WP CAP+K DW+ + C+ E ++WGN+F+ C+DIT+
Sbjct: 65 AAVEGHGFVIEPISRQYLRSKEFNDGDEY-YVEKWAGSFNGGGADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 366
BLAST of mRNA_P-littoralis_Contig206.14.2 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 333 bits (854), Expect = 1.370e-96 Identity = 218/495 (44.04%), Postives = 273/495 (55.15%), Query Frame = 2
Query: 305 IEKHADAYNGGGAAVVKARQLDRTDPEVLKKYGDGSYWPMAYAFDLGEKCANGNYLENDDLAVSHGVCGDTPQSGD----DNPYVYSTPNSEWDTLTDYTPGEIIDIDVIVTNYHWGHFEVFLCCTADLDDPLGVAKQSCFNKYPLDRDPSDSNNSPVDSAYPGRYYLNPPCMGEQNEVDQTRPELDGVLMDGTVNHMRYKLP-NIECDHAILMMRYHSGRGCKSPGYDEFEPPSWPSACAPNKVDWISTSSHSCNSEDREWGNL---FWNCADITITGSVS---------------------DQSAGAAPAPTPTPEAAXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDTKPVSAPTSVVGQPTTPDDADSSVGYSHE----GCFADDAEDRVLGQKISSEDMSTAVCSEYCLAKQATYMATQFGDECWCSQEVDLAFARHTEDEESNFGLCDMMCEGNLDETCGGHDAFDLYKI 1690
+EK+A AYN GG V+ R TDP +L +YGDG Y P+ + +D GE NGNY+E ++V HGVCGD P+SGD D YSTPN +W L ++ G+ ++I ++ +H+GH E F+C T DLDDP VA Q CFNKYPL R D NSP+D YPGRYY +PPC +NE +Q + D G V M Y LP N+ C+H +L M Y++G C PGY+EF P SW S CAPNK DWI S C D EW NL FW C+DI IT + D + P T P A XXXXXXXXXXXXX XXXXXXXXXXX T P TTP D VG E GCF D+ EDR+LG K+ S DM+T VC +C A +MATQFG ECWCS + L + RH + +++ +CDM C G+ + CGG ++FDLYK+
Sbjct: 13 LEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGWY-PLRWVYDKGEMAPNGNYIEPQGISVRHGVCGD-PKSGDQGGQDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDDVATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCR--ENETEQ---DYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYYTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCG--DNEW-NLAEEFWACSDIAITAETNWCLPCPFFHRICRWIVACRDPDAQPRSRPTATDAPVDATAEPTAAATAEPLHPTPXXXXXXXXXXXXXTPEPTXXXXXXXXXXXXXGTTMTPEPIE-----TTPPPTDGDVGDGEEAEYVGCFHDNKEDRILGDKLDSVDMTTEVCLAHCTELGAAFMATQFGFECWCSADELLDYERHYQMNDAD-AVCDMSCRGDKTQPCGGFNSFDLYKL 491
BLAST of mRNA_P-littoralis_Contig206.14.2 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 324 bits (831), Expect = 1.650e-96 Identity = 183/496 (36.90%), Postives = 249/496 (50.20%), Query Frame = 2
Query: 227 HMFQTKPVSRHFLHTKEFNSNGQYGDIEKHADAYNGGGAAVVKARQLDRTDPEVLKKYGDGSYWPMAYAFDLGEKCANGNYLENDDLAVSHGVCGDTPQSGDDNPYVYSTPNSEWDTLTDYTPGEIIDIDVIVTNYHWGHFEVFLCCTADLDDPLGVAKQSCFNKYPLDRDPSDSNNSPVDSAYPGRYYLNPPCMGEQNEVDQTRPELDGVLMDGTVNHMRYKLPNIECDHAILMMRYHSGRGCKSPGYDEFEPPSWPSACAPNKVDWISTSSHSCNSEDREWGNLFWNCADITITGSVSDQSAGAAPAPTPTPEAAXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDTKPVSAPTSVVGQPTTPDDADSSVG----YSHEGCFADDAEDRVLGQKISSEDMSTAVCSEYCLAKQATYMATQFGDECWCSQEVDLAFARHTEDEESNFGLCDMMCEGNLDETCGGHDAFDLYKITGPM 1702
H+ Q P+SR +F + ++E YN G VK R D D L YG G +P+ + GE NGNYLE +++A HGVCGD Q+ D+ VYST N WD L +T G+++++D+++ YHWGH E F+C T D+DDP GV Q CFN +PL R D + SP+D YPGRYY++P C E E +Q+ ++G + MRY LP+IEC+H IL M Y++G CK GY+EF P SWPS+CAPNK DWI + C + ++ FW C+D ++T S G+ PA P P+ PV DD DS+ G Y + GC+ D +DR+LG K+ S+ M+ C EYC A YMATQ+ EC+CS + DL + RH +CD C G+ ETCGG +AFDLY+I M
Sbjct: 21 HIMQKYPMSRQLSRGIDFKAWDDP-EVEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGEEFPLYF----GEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREE--ETEQSSNSIEGYNIK-----MRYVLPDIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRG-QYPEEFWACSDFSMT------SDGSTPADAPMPD-----------------------------------------------------PVDEE----------DDEDSTDGGMEMYEYVGCYTDRQDDRILGDKLDSDLMTADFCYEYCSEIGAAYMATQYAFECFCSADEDLDYERH------GTAMCDKACRGDEGETCGGENAFDLYRIMPSM 428
BLAST of mRNA_P-littoralis_Contig206.14.2 vs. uniprot
Match: A0A6H5JNS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS7_9PHAE) HSP 1 Score: 310 bits (793), Expect = 1.530e-93 Identity = 141/274 (51.46%), Postives = 184/274 (67.15%), Query Frame = 2
Query: 329 NGGGAAVVKARQLDRTDPEVLKKYGDGSYWPMAYAFDLGEKCANGNYLENDDLAVSHGVCGDTPQSGDDNPYVYSTPNSEWDTLTDYTPGEIIDIDVIVTNYHWGHFEVFLCCTADLDDPLGVAKQSCFNKYPLDRDPSDSNNSPVDSAYPGRYYLNPPCMGEQNEVDQT-RPELDGV---LMDGTVNHMRYKLPNIECDHAILMMRYHSGRGCKSPGYDEFEPPSWPSACAPNKVDWISTSSHSCNSEDREWGNLFWNCADITIT--GSVSDQ 1132
NG GA V+AR + DP+VL YGDG+YW + A+D+GE+C N NYLE+D +AV HGVCGD PQ G DNP YSTPN+ W ++ Y G II+I ++ N HWGH E FLC TAD+DDP GV Q C N +PLDRD +D NSP+D YPGR+++NP C G E DQ+ RP L G L G +N+ RY LPNI+C+H +L M+Y++ GC PGY EF+P WP CAP+K DW+ + C E R+WGN+F+ C+DIT+ G ++ Q
Sbjct: 5 NGTGADEVQARTITNIDPDVLADYGDGNYWIVGAAWDMGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMHPLDRDETDWWNSPIDQEYPGRFFVNPDCRGGNEETDQSGRPVLTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDP-EWPGDCAPDKEDWLPHKNPGCGDEGRKWGNVFFGCSDITLVANGEINPQ 277
BLAST of mRNA_P-littoralis_Contig206.14.2 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 277 bits (709), Expect = 1.820e-80 Identity = 133/279 (47.67%), Postives = 170/279 (60.93%), Query Frame = 2
Query: 326 YNGGGAAVVKARQLDRTDPEVLKKYGDGSYWPMAYAFDLGEKCANGNYLENDDLAVSHGVCGDTPQSGDDNPYVYSTPNSEWDTLTDYTPGEIIDIDVIVTNYHWGHFEVFLCCTADLDDPLGVAKQSCFNKYPLDRDPSDSNNSPVDSAYPGRYYLNPPCMGEQNEVDQTRPELDGVLMDGTVNHMRYKLPN-IECDHAILMMRYHSGRGCKSPGYDEFEPPSWPSACAPNKVDWISTSSHSCNSEDREWGNLFWNCADITITGSVSDQSAGAAPAPT 1159
YN G VK R + TDP VL +YGDG WP+ +A++ GE NGNYLE D++A HG+CGD Q+ ++ YSTPN +W L Y G++++I + +T YHWGH E F+C +++DP G+A Q CFN YPL R D NSP+D YPGRYY++P C + E DQT+PE DG V H Y+LP + CD IL M Y++G CK GY+EFEP SWPSACAP K DWI + C E+ + FW CAD IT D A PAPT
Sbjct: 21 YNARGPTYVKERGMVNTDPAVLAEYGDGE-WPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCR--EGETDQTKPE---GAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCG-ENGSYPEEFWACADFAIT---PDGMANPTPAPT 289
BLAST of mRNA_P-littoralis_Contig206.14.2 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI) HSP 1 Score: 266 bits (679), Expect = 1.240e-75 Identity = 135/328 (41.16%), Postives = 195/328 (59.45%), Query Frame = 2
Query: 188 TLLVLTRVAPTNGHMFQTKPVSRHFLHTKEFNSNGQYGDIEKHADAYNGGGAAVVKARQLDRTDPEVLKKYGDGSYWPMAYAFDLGEKCANGNYLENDDLAVSHGVCGDTPQSGDDNPYVYSTPNSEWDTLTDYTPGEIIDIDVIVTNYHWGHFEVFLCCTADLDDPLGVAKQSCFNKYPLDRDPSDSNNSPVDSAYPGRYYLNPPCMGEQNEVDQTRPELDGVLMDGTVNHMRYKLPNIECDHAILMMRYHSGRGCKSPGYDEFEPPSWPSACAPNKVDWISTSSHSCNSEDREWGNLFWNCADITITGSVSDQSAGAAPAPTPTPE 1171
T+++ + GH+++ P+SR F +++ F + + YN G+A KAR ++ DP+VL+ +G GS +P+A+ NGNYLE +++AV HGVCGD Q+ YST +S W+ L Y G++++ +++ +HWGH E F+C AD +DP G+ Q CFN+YPL R D +NSP+D +PGRYY +P C G+ EVDQT+P L + G MRY LP+IEC H IL M YH+G C GY+EF PPSWPSACAPNK DW+ T+ +C + + FW C+D +IT + P+PTP+ E
Sbjct: 6 TVVLALALRKAQGHIYELYPMSRSFANSESFLDKDDP-NFDGCPHCYNAHGSAGTKARGIELMDPDVLESHGGGSEFPLAFV----PLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFIC-NAD-NDPDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKP-LHAI--SGENMKMRYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTREACG-QGGYYPEEFWACSDFSITRDATP------PSPTPSVE 316 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig206.14.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig206.14.2 >prot_P-littoralis_Contig206.14.2 ID=prot_P-littoralis_Contig206.14.2|Name=mRNA_P-littoralis_Contig206.14.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=618bp MPASSTSSLAAATLLVLTRVAPTNGHMFQTKPVSRHFLHTKEFNSNGQYGback to top mRNA from alignment at P-littoralis_Contig206:124081..136971+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig206.14.2 ID=mRNA_P-littoralis_Contig206.14.2|Name=mRNA_P-littoralis_Contig206.14.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=12891bp|location=Sequence derived from alignment at P-littoralis_Contig206:124081..136971+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig206:124081..136971+ >mRNA_P-littoralis_Contig206.14.2 ID=mRNA_P-littoralis_Contig206.14.2|Name=mRNA_P-littoralis_Contig206.14.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1854bp|location=Sequence derived from alignment at P-littoralis_Contig206:124081..136971+ (Pylaiella littoralis U1_48)back to top |