prot_P-littoralis_Contig205.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig205.4.1
Unique Nameprot_P-littoralis_Contig205.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length250
Homology
BLAST of mRNA_P-littoralis_Contig205.4.1 vs. uniprot
Match: D7G2Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Z6_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 2.280e-88
Identity = 151/228 (66.23%), Postives = 169/228 (74.12%), Query Frame = 0
Query:   22 VVAVLAQLVDAFAFSSSTLCQTFADASRQGRATRSWRPSSSSRTTALTMMAKNRRERRYADGKGKKSSASKGPKRQPSGPGSDAKWLQVLDKAPEMEIGSVKVVSGKYKGDDKFFTLATHGGNFFAVSEACGRCKFPMINGKVKLLKDGGKAEDVKEGVEQDPEAEVAIGCPLCGAMFDLRTGAIAGEQPKGLAQMLVSKVVSQTPVESIKTYQAQALSTGAVIVRVD 249
            +V VL  LVDAFA  SS    T A A    R+TRS         T +           YA+ K KKSS SK   +QPSG  S+AKWLQVLD   E+E GSVKVVSGKYKG+D+ FTLA +GG ++AVSEACGRCKFP+INGKVKLL  GGKAEDVK GVEQDPEAE+AI CPLCGAMF+LRTG IAGEQPKGLAQ+LVSKVVSQTP ESI T+QAQ LSTGAV+VRVD
Sbjct:    1 MVVVLVPLVDAFALGSSAGWHTHAVARPATRSTRS--------LTTMMXXXXXXXXXXYAEAKNKKSSGSK---QQPSGATSNAKWLQVLDSTSELEPGSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGEIAGEQPKGLAQVLVSKVVSQTPAESITTHQAQVLSTGAVVVRVD 217          
BLAST of mRNA_P-littoralis_Contig205.4.1 vs. uniprot
Match: W7TAQ7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAQ7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 6.890e-11
Identity = 66/194 (34.02%), Postives = 92/194 (47.42%), Query Frame = 0
Query:   59 PSSSSRTTALTMMAKNRRERRYADGKGKKSSASKGPKRQPSGPGSDAK-WLQVLDKAPEMEI--GSVKVVSGKYKGDDKFFTLATHG-GNFFAVSEACGRCKFPMINGKVKLLKDGGKAEDVKEGVEQDPEAEVAIGCPLCGAMFDLRTGAIAGEQPKGLAQMLVSKVVSQTPVESIKTYQAQALSTGAVIVRV 248
            PS+SS T    M+   RR  R      K+  A+ GP+   S  G   + + +VLD   E+    GS K V G  K DDKF  L     G   A+   CGRCKFP++ GKV        +ED    VE D +  + I CPLC   F L +G + G Q   + Q + +   S+     +KTY A A + G+V  ++
Sbjct:   60 PSTSSLTRNAQMLG--RRHGRVLTQAKKRGGAASGPQ---SVTGESLRGFTKVLDVGSELADAEGSQKAV-GPLK-DDKFLLLIRRKEGRVSAIDANCGRCKFPLLKGKV--------SED--PSVEDDEDKGI-ITCPLCAVRFSLASGLVTGAQADNVLQRVSASFFSKQIASGLKTYAAAAGTDGSVYAKL 235          
BLAST of mRNA_P-littoralis_Contig205.4.1 vs. uniprot
Match: A0A7S2USE0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USE0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 5.450e-10
Identity = 43/147 (29.25%), Postives = 66/147 (44.90%), Query Frame = 0
Query:  107 WLQVLDKAPEMEI--GSVKVVS-GKYKGDDKFFTLATHGGNFFAVSEACGRCKFPMINGKVKLLKDGGKAEDVKEGVEQDPEAEVAIGCPLCGAMFDLRTGAIAGE---QPKGLAQMLVSKVVSQTPVESIKTYQAQALSTGAVIVR 247
            W+QV +   +M+   G+ K V      G      +  H G   +    CGRC+FP+INGK+                  D + E  I CPLCG  F L +G    E   Q KGL Q ++   + +T  ++IK Y+ +  + G V ++
Sbjct:   93 WIQVFESDEDMDSKEGATKAVEITDPLGKPAPVLMIRHEGKISSTEIGCGRCQFPLINGKI-----------------MDQDGEPHIECPLCGCGFSLSSGVYKEEMDGQSKGLMQNMMGGFMGKTTPKNIKVYRTEENNVGEVYIK 222          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig205.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G2Z6_ECTSI2.280e-8866.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TAQ7_9STRA6.890e-1134.02Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S2USE0_9STRA5.450e-1029.25Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 107..249
e-value: 2.1E-6
score: 29.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig205contigP-littoralis_Contig205:33613..42836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig205.4.1mRNA_P-littoralis_Contig205.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig205 32749..42885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig205.4.1 ID=prot_P-littoralis_Contig205.4.1|Name=mRNA_P-littoralis_Contig205.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=250bp
MLLSANLSNMSSSSRMLALVSVVAVLAQLVDAFAFSSSTLCQTFADASRQ
GRATRSWRPSSSSRTTALTMMAKNRRERRYADGKGKKSSASKGPKRQPSG
PGSDAKWLQVLDKAPEMEIGSVKVVSGKYKGDDKFFTLATHGGNFFAVSE
ACGRCKFPMINGKVKLLKDGGKAEDVKEGVEQDPEAEVAIGCPLCGAMFD
LRTGAIAGEQPKGLAQMLVSKVVSQTPVESIKTYQAQALSTGAVIVRVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf