prot_P-littoralis_Contig204.1.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig204.1.5
Unique Nameprot_P-littoralis_Contig204.1.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length185
Homology
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BLAST of mRNA_P-littoralis_Contig204.1.5 vs. uniprot
Match: D7FN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN49_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 2.150e-64
Identity = 97/141 (68.79%), Postives = 117/141 (82.98%), Query Frame = 0 
Query:   25 LSPGEFSRRACAELSVGSAFVQPMAQSISQQLIEHKRKFPGWTLEGMVAPAAENIQVLDIDVRFRSIIYRDQVRWDINCLHNSPERFARSTVADLNLPQEMEPTIALILHQQVSNHRMAAPSSISSSEGCHFKDIEGPCIS 165
            LSP EFSRR CAEL +G +FVQP+AQSI QQLIE+ RK P W +EG +APA ENIQ + IDVRFRS+I+RD+++WD+NC +NSPE+FAR TVADLNLPQEMEP IAL  HQQVS  RMAAPSS +++E   FKD+EGPC+S
Sbjct:   39 LSPLEFSRRTCAELGIGVSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTTHQQVSRFRMAAPSSTTNNEDAQFKDVEGPCVS 179
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BLAST of mRNA_P-littoralis_Contig204.1.5 vs. uniprot
Match: A0A835YTF3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF3_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.870e-18
Identity = 48/126 (38.10%), Postives = 75/126 (59.52%), Query Frame = 0 
Query:   25 LSPGEFSRRACAELSVGSAFVQPMAQSISQQLIEHKRKFPGWTLEGMVA---PAAENIQVLDIDVRFRSIIYRDQVRWDINCLHNSPERFARSTVADLNLPQEMEPTIALILHQQVSNHRMAAPSS 147
            LSP  F+    A+L++      P+A++I  Q++  +   P W+     A   PA E +  +++++R  +++YRD+  WD+N   NSPE FA  TVADL LPQ MEP IAL L +Q++N+R    S+
Sbjct:  530 LSPEAFAAATAADLALPRKLEAPLARAIRAQVVTAQATLPVWSGSSGAAAMYPAGEALVPIELELRLGAVLYRDKFEWDMNEPLNSPEAFAARTVADLALPQPMEPAIALALREQLANYRQLTRSA 655
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BLAST of mRNA_P-littoralis_Contig204.1.5 vs. uniprot
Match: A0A8H7RY35_9FUNG (GATA-type domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7RY35_9FUNG)

HSP 1 Score: 53.5 bits (127), Expect = 4.800e-5
Identity = 29/59 (49.15%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:   82 LDIDVRFRSIIYRDQVRWDINCLHNSPERFARSTVADLNLPQEMEPTIALILHQQVSNH 140
            LDI V  +++I  DQ  WDINC HNSPERFA   V +L L  E +  IA  + +QV  H
Sbjct:  385 LDITVGNQALI--DQFEWDINCRHNSPERFAEVLVKELGLGGEFKSAIAHSIREQVHAH 441
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig204.1.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FN49_ECTSI2.150e-6468.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTF3_9STRA4.870e-1838.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8H7RY35_9FUNG4.800e-549.15GATA-type domain-containing protein n=1 Tax=Mucor ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006939SNF5/SMARCB1/INI1PFAMPF04855SNF5coord: 81..145
e-value: 3.0E-13
score: 50.1
NoneNo IPR availablePANTHERPTHR10019:SF5SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY B MEMBER 1coord: 21..148
NoneNo IPR availablePANTHERPTHR10019SNF5coord: 21..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig204contigP-littoralis_Contig204:3872..16837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig204.1.5mRNA_P-littoralis_Contig204.1.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig204 2651..17017 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig204.1.5 ID=prot_P-littoralis_Contig204.1.5|Name=mRNA_P-littoralis_Contig204.1.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=185bp
MYFESVSRVRLIRDIIPKSWKLPILSPGEFSRRACAELSVGSAFVQPMAQ
SISQQLIEHKRKFPGWTLEGMVAPAAENIQVLDIDVRFRSIIYRDQVRWD
INCLHNSPERFARSTVADLNLPQEMEPTIALILHQQVSNHRMAAPSSISS
SEGCHFKDIEGPCISPVQPVDQNEFNARNWKHNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006939SNF5