mRNA_P-littoralis_Contig204.1.5 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig204.1.5
Unique Name	mRNA_P-littoralis_Contig204.1.5
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig204.1.5 vs. uniprot
Match: D7FN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN49_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 7.700e-59
Identity = 97/141 (68.79%), Postives = 117/141 (82.98%), Query Frame = 1

Query:  253 LSPGEFSRRACAELSVGSAFVQPMAQSISQQLIEHKRKFPGWTLEGMVAPAAENIQVLDIDVRFRSIIYRDQVRWDINCLHNSPERFARSTVADLNLPQEMEPTIALILHQQVSNHRMAAPSSISSSEGCHFKDIEGPCIS 675
            LSP EFSRR CAEL +G +FVQP+AQSI QQLIE+ RK P W +EG +APA ENIQ + IDVRFRS+I+RD+++WD+NC +NSPE+FAR TVADLNLPQEMEP IAL  HQQVS  RMAAPSS +++E   FKD+EGPC+S
Sbjct:   39 LSPLEFSRRTCAELGIGVSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTTHQQVSRFRMAAPSSTTNNEDAQFKDVEGPCVS 179

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BLAST of mRNA_P-littoralis_Contig204.1.5 vs. uniprot
Match: A0A835YTF3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF3_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.710e-15
Identity = 48/126 (38.10%), Postives = 75/126 (59.52%), Query Frame = 1

Query:  253 LSPGEFSRRACAELSVGSAFVQPMAQSISQQLIEHKRKFPGWTLEGMVA---PAAENIQVLDIDVRFRSIIYRDQVRWDINCLHNSPERFARSTVADLNLPQEMEPTIALILHQQVSNHRMAAPSS 621
            LSP  F+    A+L++      P+A++I  Q++  +   P W+     A   PA E +  +++++R  +++YRD+  WD+N   NSPE FA  TVADL LPQ MEP IAL L +Q++N+R    S+
Sbjct:  530 LSPEAFAAATAADLALPRKLEAPLARAIRAQVVTAQATLPVWSGSSGAAAMYPAGEALVPIELELRLGAVLYRDKFEWDMNEPLNSPEAFAARTVADLALPQPMEPAIALALREQLANYRQLTRSA 655

[Close]

BLAST of mRNA_P-littoralis_Contig204.1.5 vs. uniprot
Match: A0A6H5KRK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK3_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 4.610e-8
Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 2

Query:   68 LVSSGYCGASIVCCNVDIDLDGVRVTESVLWDL-QSSVRCTSR 193
            L SSGYCGAS+VCCN+D+++ GVR  +SV+WD+ QSS   +SR
Sbjct:    2 LASSGYCGASVVCCNMDVEIGGVRFVDSVMWDIHQSSAVRSSR 44

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig204.1.5 vs. uniprot

BLAST of mRNA_P-littoralis_Contig204.1.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FN49_ECTSI	7.700e-59	68.79	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835YTF3_9STRA	2.710e-15	38.10	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5KRK3_9PHAE	4.610e-8	60.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig204	contig	P-littoralis_Contig204:2651..17017 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FN49
PFAMs	HMG_box,SNF5
Model size	1956
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K09530,ko:K11648,ko:K12662
KEGG Pathway	ko03040,ko04141,ko04714,ko05225,map03040,map04141,map04714,map05225
KEGG Module	M00354
Hectar predicted targeting category	other localisation
GOs	GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006333,GO:0006337,GO:0006338,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016043,GO:0019219,GO:0019222,GO:0022411,GO:0031323,GO:0031326,GO:0031498,GO:0032984,GO:0032986,GO:0033554,GO:0034641,GO:0034728,GO:0043044,GO:0043170,GO:0043933,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0065007,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:1901360,GO:1903506,GO:2000112,GO:2001141
Exons	4
Evalue	3.53e-65
EggNOG OGs	KOG1649@1\|root,KOG1649@2759\|Eukaryota
Ec32 ortholog description	SNF5
Ec32 ortholog	Ec-06_008390.1
Description	chromatin disassembly
Cds size	555
COG category	K
BRITE	ko00000,ko00001,ko00002,ko01009,ko03021,ko03036,ko03041,ko03110,ko04131

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig204.1.5	prot_P-littoralis_Contig204.1.5	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig204 3872..16837 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789996.8263757-UTR-P-littoralis_Contig204:2650..3871	1680789996.8263757-UTR-P-littoralis_Contig204:2650..3871	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig204 2651..3871 -
1680789996.8799047-UTR-P-littoralis_Contig204:16837..17017	1680789996.8799047-UTR-P-littoralis_Contig204:16837..17017	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig204 16838..17017 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789996.8428025-CDS-P-littoralis_Contig204:3871..4057	1680789996.8428025-CDS-P-littoralis_Contig204:3871..4057	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig204 3872..4057 -
1680789996.8517773-CDS-P-littoralis_Contig204:4307..4604	1680789996.8517773-CDS-P-littoralis_Contig204:4307..4604	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig204 4308..4604 -
1680789996.860398-CDS-P-littoralis_Contig204:14105..14150	1680789996.860398-CDS-P-littoralis_Contig204:14105..14150	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig204 14106..14150 -
1680789996.8700707-CDS-P-littoralis_Contig204:16810..16837	1680789996.8700707-CDS-P-littoralis_Contig204:16810..16837	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig204 16811..16837 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig204:2651..17017-
coding sequence from alignment at P-littoralis_Contig204:2651..17017-

protein sequence of mRNA_P-littoralis_Contig204.1.5

>prot_P-littoralis_Contig204.1.5 ID=prot_P-littoralis_Contig204.1.5|Name=mRNA_P-littoralis_Contig204.1.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=185bp
MYFESVSRVRLIRDIIPKSWKLPILSPGEFSRRACAELSVGSAFVQPMAQ
SISQQLIEHKRKFPGWTLEGMVAPAAENIQVLDIDVRFRSIIYRDQVRWD
INCLHNSPERFARSTVADLNLPQEMEPTIALILHQQVSNHRMAAPSSISS
SEGCHFKDIEGPCISPVQPVDQNEFNARNWKHNR*

mRNA from alignment at P-littoralis_Contig204:2651..17017-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig204.1.5 ID=mRNA_P-littoralis_Contig204.1.5|Name=mRNA_P-littoralis_Contig204.1.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=14367bp|location=Sequence derived from alignment at P-littoralis_Contig204:2651..17017- (Pylaiella littoralis U1_48)
TGTCAGTTCTTCGGAGCACAAGCGGGATATGGATCAGCTCACAAGGATGA
CCTCCGCCAATGCAAGACTCGTGAGCAGTGGATACTGCGGGGCTTCGATT
GTGTGCTGTAACGTCGATATTGATCTTGATGGTGTGCGCGTCACTGAATC
AGTCTTGTGGGATTTGCAAAGCTCGGTGAGATGTACTTCGAGAGTGTATC
ACGGGTGGCAACTCTGGTACATTGAGGGCACCCCGTGATACAAGGAAAAT
ACTGTACTACCGAAATGGCATAACCCTCCCACATTGCACAACTCCAGACG
GCACAATGTGGAATAGTTGGTGAGTGCCCCTTTAATCCTCTTGGGCCTTC
GGAGGGAATACTCGGGCATCAGAATCGAGCATTTTTTTTTTTTGTTCCAG
CCCGGTCTACTTGGATTCTGGAATCATGAACATGTCTGTGAATGCGCCGC
ACTTCCGGGAAACAGCATGCATTGGCTTCTCCATCTGGCAAGGCTTCGAT
GAACGAGACGAATTGGTTGTAGCAGGCGGTTGTGCCGCCCTCCGTGTAGG
TGGTAGCGTCAACCGCGGAAAGAACAGACATGGTTGCGTTCTCTACGAGA
GCCTTCACCAGGCAGCAGCACCAGCAGCAATGCGTACGCTTAAGAGACCG
AAGGCCTCCACACCCAGGGGATAAGAGAAATACCGAAACAGGAAAACCTT
CAACCGGGAAAAATCGGGCATTATTTCCGGGCAATTGAATGATACTTGAA
ATAGAGAGCATGGGCAAACACACCGGAACCAGGGATCCAACATGCTACCT
CTGTCGGCTCGTAATAGCGGCCGGGCTATTCTTCTACTATGTAACCCTAA
CCCATCGAGCCTATCGCGGGCCTTTGCCGTGGCCCCTGCGTATTTTTAGC
TCGTGCCATGGCTGCTGTGCTGCTGCAATTCTCGAGGCGATTGGCAGGAG
CTTATTTTATTTTTTTGAGGCAATGCGCGGCGAGATTGCGCACGAAACGG
AACCCTTTTGCCCGACAAAAAAAAAGATTACTCGACTAGCCACCTGCGTG
AGCAGCCTCAGTCCCAGAGGGGTTAACGGGGAATTAAAGTAAACGAAATT
GGGCTCCGATCGGCCCGAGGAAAAAAGAGAGAGAGGCATTATTTTCTTTG
AAAGAGCGTGTTTCCGATTCAGCACCCACCGAGGAGGCTTGTTTTTGTTC
ATTTCTTCGCGAAAATGAAGTGTTTTGGACCTTTTTTTTTTTTTGCGAAA
ACCAAAAACGAAATCGACATGGCAGGCTTGTTGGCGGAGACGCTTCAGCT
CGGCAAGGCACCTCCGGAAGACTTTTGCACAGTAGACAAGTTCACGTGTT
GACTGATAACTCGCCACACAAGGGACGACATTCCCTGCTATTTGCATGTC
TAGATAGATGGGGTTCGCGTAAACTAGGAATACCCAAGGTTCAGGGCAGT
GGGGCGCCAAGCGTGACGCAAACAAAGTTTCCAACTTGTGCTCAACGACC
CGCCCGTGCTTTGAGCCGCTTTTCCGGGTGAGTTCGCAAGCAGCCACGTT
CCCGTTTTCACTATTATCTCAACAGAAACCGGACGAAATTCCCTACCAAC
TGCGTACCTAGAGAGATGGGTCTACTTTCCATCGGGACCGCCCAAGGTTT
GGGGCCGCTAGGTGCCGAGCGTGACGGGAAACGAGTGGTCAGCCATCCGA
AAAATGTCCAACAAAGAGCAGCCGATTTTGCCTCTTTCGCCTGAGAGACG
GCTGATTCGCAAGGTTTTTCCCGTCGCGTTTGACGCGGTTCTGCTACGAA
TTTTGACCTGTGCCGACAGAAGATTGTCATACCGTTGTGTCGGTGCAGTT
GGAAAAGAATCTCGTCCAGTTTTGGGCGAGATATCAAAGAAAACATGAAC
TTCGCTCCTGTGCAAAGGTGAACGCAAATAAATAGCGTTCCTTCGAGTGC
ATCCCCTCTTCGTCTCCACCCTGGTGCCAGGCCCGTTGCAACAGCTTGCA
ATAAAATGATAATTCCTGTTCGGGTTTATGTAAAAAGGCGTGTGTTCTAA
TTTCGTTTTCGCAATTTCGTTAATTTTATTCTCCCGTTAGAGCCCGTATT
AACGGGGAATTGAAAAAAACGAAATTGCGAAAAAGAAAACGAGAGAACTT
CGTTCTTCATTAAATAAAAAAAAATAATCGTTGTTGGGTATTAACGCGTT
TTTCCACAAGGACACCGAGGACCCGAATACGAAGAGACAACGCCAAACAT
GAAGTACAAACCCTAGCGCGCGCATAGTTTGCAACGGATACGGTGTGATG
TGCAACAAACAACACATGACGACAACAGCAGAAGTTCTCCTGTGATTGTG
TTCCGTGAGCGAGCGTTCTCTCCTTGCTTATATCGCTGTCGTGTCCTGCT
CTTGCTACCTGGCTGTTGCGAGCTGGCTGTTGCGCCGACTTCCTGGTTGC
CATGGAGCCTGGGAGGCTGTTGAATCAAGCCTCCCCAAGCTACGACACTC
CGGCATTTCGTTTTCGTTTTCGCAAAAAAAAAGGTCCAAAACACTTTATT
TTCGCGAAGAAAAAAACGAAATACCGCCTGTTCGGTGTGTGCTGAATCGG
AGACACGCCTCTTTCAAAGAAAATAACGCCTCTTTCTCTTTTTTTCTCGG
ACCAATCAGAGCCCAATTTCGTTTTCTTTTTCGCAATTTCGTTTTTTTCA
ATTCCCCGTTAATCCGGGCTCTTAATTCGGGACTATGTTACGGAGTATTG
GGTATACCCCTAGGTAAGGGTATTATCTAGACATAGGGTACCTGTAGTAT
GTATTCCAAGCCATCGGGCCCCCTGGCCCGATGACGCCCGTGCCCTCAGT
GTGTCCTGTCGGCTGAGAGACTAATAAGAGATATCATCCCCAAGAGCTGG
AAGCTACCCATTGTGAGTGTCCAAGTGGCAAAGAACCCCCTAGGAGCAAG
AGCTCCTTAAGATCTGGCGTCGACGGCAAGCTTCGTATTACCATTGGTTT
AACGTGCGGTAAAAGCGAGGAAAAAGTAAAAACAAATGATGAAAAAATTG
GAAAAAAGACAAAAACGGAGAAAAAGAAAAAAAGTGGGAAAAAAGAAATA
AAGAGAACAACACAGCCAACGCTCGAACGCTCGCTGTCGCGATTTGGTCC
AGCGTGCCGTGCACTGGTGAGCATTGAACTGGCGCGCATGATGTGCTCCA
CGAGGTGTTTACTGCTGGTTCAGATTGAACATTTTTGCGGATCGAAGTTG
CCCGCGGCCTTCGTATGAAACCACGCCGGGGGCTACGGATCTGCTTGTAA
CGTCAAGGACGAGGTCGGCCGGGCTTTCACAAGCTTATCTACAACCTTAC
CGTAAAAGGAGCTTTATTATCAATGCGATCGTTTTCAATATTTCGTTGGA
ATCTTCCAACGATCGTATGATAGGACCGGGAAAACATCGTTTCTTTACGG
GTGGAGCTCAAACACGGAAAAAAACTACTGCTGTAAACGAGGTACACTTC
ACGCCATGAGACAGCAGACAGCACAGCAGCGCCTGTAGGCCTCGTTTTAG
CAGCATCACTGATTCTTGGGAAGCGGACATCTATCTGCACATCGACGCCG
CTATCTGTACGCAGTTTTCAGCCCTCGTGTGCTGGTTAAAGGAGGGTTGC
GAGAGGAGTGTTGGTTCTCAGGGTGGTTCAAAATCCCGGACGTAAATCAT
CATGGTGTTTTTTGCGTCGCAATCACAACCTATACTTCACGGCATCAAAC
AGAAACGGAGCTAGACGACCTCCCAAGCCCTCATTCTTTCAAAAGAGAAA
CCAACATGATACTGACCGTCGACACCGCTGCCTCTACCCAGTGGTCACAG
CATGTGTGCTACCCAGGGAAGGATTGCAAGAAAGGGGTGTGTGTTGATGG
GGCGGACCGAAAATGCGGAGAACGCGGCGCAAAAGAGTGCCTGCAAGTTC
TGACCATCGTCCGTCCGCAATACCTTCGCCGATCTTTTGCCACCCCCCGT
CAAATACACAAAGCAGGGATCGCTTGCTTATGTGTTGTTCTCATAGTCTC
TGTTCTTTCTGCTGCTGCTGGTAGGTGGGTTGAGGTGGGTTGTGGTGTGT
TCATTGGAAATCTTGAAAAATTCTTGTGTTCGTGGGAAACGAGTTTTTTT
CACGAATTTTTTGGTGAGTGGATTTTCCACGTTCGGGGGGAAAATAGATT
CCAACGATCATTGAAAACATCCACGGGGTGTCTCGGTAATTGTCCCGCTG
TACTTGTACCGCGGTATCGGTAATGGGACTTTTTGCGTTACCGCGTTTTT
TCAATTGTCCCATTCCCATACACAAATTCAAGAATAATGTGAATATTTCT
TTTCTCTCAATTTGTTTTTCTCACAAATTTTATACTTTTTTAAATCGCCG
TTTTTGAAATTTACAGGGGGTGTCTCGGTAATTCTCCCGCGGTAATTTTA
CCGCGGTGTTTACCGCGGGAATGAGACTTTGGTGTTACCGCGCTTTTTGA
ATTGTCCCGTTCCCATACAATCAGTTACCGCAAGAAAAAAAATGTCCCAT
TCCCGCCGAACAAATTACGGTGAAAATATCGAAAATCCCGCGATTTATCG
GTACCGCGGTAACAATTGCCACAACATATCGAACGTCCCAATTACTGCAC
AGAAACACAAGTTGCGTTCACGCAAGGATATGTCATGCCCTCGTGCGTGG
GTCGATCAATAGGCCGTCGGGCGATGTTAGGAATTTCCATCGCGAAACTC
ACGAGTTCTACTCGGAAGCGTATACGCTTCAACTATTTTCTCTTTTTCCT
TTTCTCTTCTCTCGTGTCTATTTATATTTTATTTACAGCAGTTTTTGCTT
TTGGTATTGGCTCACAACCACGCGTCAGAGCAACACAGCTCGAGCTACAC
ACCACACAGCGACACACCCGAGGGTAGGCAGGCAGTCATGGAAGCAGGCG
CCAATGTTGGTCTGTTGAAAGCAACTAACTGCTGTTTCTTGAAAGCAACT
AACTGCTGTTTCGCAGAAGTTGCTGTGTGGACATGCAAACATACATGTGT
CCACGTGACAACAACAGCGTGTGCCGTACCAAACACCGTAGTTTTTTGGA
CGGGGGTGGGCTCTCCACGGCTTTGGCGTGGTAGGCTTTGGTTTGGGTAA
AAGAGAGTAGTTCTATCGTGGTGATGAAAGTGATCAGTCGAATCCTGTTT
TTTATTTTTTATTGTTTTGATTTAGCTGCGAATGTCTCTCTTTGATCTTT
AGAGTATTACCTTTTTATTTTTTACTTTTTCTACTCTCTCCCTTGTATAT
GCGGCGATCAAAGTGCCAGCAATCTTATTCCCACGTCCAGGGTGGGGATC
CGACCGTGGTTGACGCCACCCGTCGTCCAAGATCTCGGGCCCGCCATTTG
ATGATTGATGTATATACAGTCAGTAGTTGGTTTTGTGTAACAAGAAGTTT
AAAATGGGGTTACCTTCGACCGTCTTTCGGTTATATCGCGTTCGTGTTAA
ATCTATGAACGTACTCGCTTCGCCACACCATACATACGCTGGGACACCTA
AAGTACATCGTTAGCGCGGTGGTCAATTACCGTGGAAAAAAAAAACGAAA
TTGCCGCGGTGGCCAATTACCGTGGAAAAAATACCGCGCATTACCGCGGC
CGTTGAGTGCCGCGATATCGGTTACCGAGGCAGTCGATACCGTAAAATAA
ATACCGTGAATTACCGCGGTTGCTGAGTACCGCGGTAAATAAATGGTCAC
GAAGCCAAAAGTCGTTGCCGAGACACCCCCTGAAAAATTAAAACAATTTT
TGTCAGTTATCGCATCGAAAAAATTGTCCCATTCCCGCAGAACAAATTAC
TGTGAAAATATCGAAAATCCCGCGATTTATCGGTACCGCGGTAAAAGCTA
CCGCAAGATTGTGAAAGTCTCAATTACCGCGTGTCCACGTGACAACAACA
GCGTGTGCCGTACCAAACACCGTAGTTTTTTGGACGGGGGTGGGCTCTTC
ACGGCTTTGGCGTGGTAGGCTTTGGTTTGGGTAAAATAGAGTAGTTCTAT
CGTGGTGATGAAAGTGATCAGTCGAATCCTGTTTTTTATTTTTTATTGTT
TTGATTTAGCTGCGAATGTCTCTCTTTGATCTTTAGAGTATTACCTTTTT
ATTTTTTACTTTTTCTACTCTCTCCCTTGTATATGCGGCGATCAAAGTGC
CAGCAATCTTATTCCCACGTCCAGGGTGGGGATCCGACCGTGGTTGACGC
CACCCGTCGTCCAAGATCTCGGGCCCGCCATTTGATGATTGATGTATATA
CAGTCAGTAGTTGGTTTTGTGTAACAAGAAGTTTAAAATGGGGTTACCTT
CGGCCGTCTTTCGGTTATATCGCGTTCGTGTTAAATCTATGAACGTACTC
GCTTCGCCACACCATACATACGCTGGGACACCTAAAATACATCGTTAGCG
CGGTGGTCAATTACCGTGGAAAAAAAAAACGAAATTGCCGCGGTGGCCAA
TTACCGTGGAAAAAATACCGCGCATTACCGCGGCCGTTGAGTGCCGCGAT
ATCGGTTACCGAGGCAGTCGATACCGTAAAATAAATACCGTGAATTACCG
CGGTTGCTGAGTACCGCGGTAAATAAATGGTCACGAAGCCAAAAGTCGTT
GCCGAGACACCCCCTGAAAAATTAAAACAATTTTTGTCGGTTACCGCATC
GAAAAAATTGTCCCATTCCCGCAGAACAAATTACTGTGAAAATATCGAAA
ATCCCGCGATTTATCGGCACCGCGGTAAAAGCTACCGCAAGATTGTGAAA
GTCTCAATTACCGCGTAGAAAAAATGTTGCGTTTCCGCAAGCAAATTGCA
GTTTTCAGTCTGTCTGGTGGGTTCGAACTCCACCATATAGTCATTTTTTT
TCTACTCTTCTACTTTTTCTCTATTCTGTTTTGTGTGCAAGGAGAGAGTT
GCGCAAGTAGAGGCAGCAACAGCGGGCACGTCCATTGTCTTGGAGCTATG
AATCTGGTTTGTGCTGTATAACATGGGTGCGTTGAAAGTAACTGCTGTTT
TGCAGAAGTTATTGTGTGGACATGCAAACATACATGTGTCCACGTGACAA
CAGTAGTCCCGTACAAAACCGTAGTGTCTTGGACAGGGGTGGTCTCTTCA
CGGCTTTGGAGTGGTAAGCTTTGGTTTGGATAAAAGAGTCGTACTCGTTG
TGGTGAAGTAATAAGTACAGTTGACACCCGGGAGTCGGATCTTGTTCGTT
GTTTATTGTTGTTTGCTTTGGCTGCGAATGTCTGTCTTTGATCTAGAGAG
TGTTTTTTTTATTCTTTTACTTTTGTGTGAAGGTGTGATACATACGTCGG
GCCGACCATGTGGTGATTGATGTGTTATACAAAGTTGGTTATACGAAATA
TACAACTAAAATATACCGTTACCACGATGAAAAAATTGCCGTGGTGGCCA
ATTACCGTGGGAAGAATAACGCAAAATTACCGCGGTGGTTGAGTACCGCG
GTAACAATAACCGCGGTGGCCAATTGCCGTGGAAAAATTGCCGCGAGTTA
CCGCGGTCGTCGCGGTAGCAGTTACCGAGGCAGTCGATCACCGTCCAATA
AATACCGTGACTTACCGCGGTTGCTGAATACCGCGGTAAATAGTCCCGAC
ATCAAAAGTCGTTACCGAGACACCCCCTGAAAATATCCGCATCGATAATA
AAGCTCCTAACGTTGTGATACCGTTGAGGGCGAGGTTTCCCGAGCGTGCA
CAAACTCATTACGGTGCTGATGGTCGTGAGCGAATCACGGTTGAGGTTGC
CCGGCCTTACCAACTCTAGTCCGGGGTATATAGGTTGTGGACGTGTCGTG
GCTATAGGGTTGGAGTGACCTTACCCAACTGCTACCTTACATTGGAGGCT
CGTGAGCATTGTGAGCTCGATCATGAGAGGTTTGCCAACCATCACCCCCA
ATCGAAAGGTTGAGAATGTGCACTAACCGTCTAGAACGTACCCCAGTGGC
CACCTGTGATGATTTCGTATGACATCATAAACATGTTGTCCCTAAAATAC
CGAATACCGGACGGCGGTACTACAGCTGCACTGATAATGTACTCGGAGTA
CTTCTTATTCCTGTCTCATAAGGTACCAGGTATGCGATACTGCCGTACTA
CTGCTCGGTGTTCTGCCGCTGCTACTGCTTTGTGAACGTGTATGCGACAT
TGCTGTACGTAGATGTTTACCGGAAGGTCAAATTAGTCACACGAGCAACA
TTGCAAAATGCGCTCGTGATTCTAAGCATATACTTCGAAGTACGAAGTAT
CATGCAATACTATCGTGAGAAAACACATCGGTGATGAATAATACTTCGGA
GTAATTCGTAAAATAGTACTGAAGTACATACTTCGAAGTACGATATATTT
GTCTACGAGTATTTGTCAGGATTTTCCCGACAGGATGTTTTTCACGTTTG
TTTTTCTGGGGGAAAATGCTTCGAAATATGAAACATGCGGCCGAAGATTT
ATCAAAACGACGATTCCGGCCCTTTGCTGGGAAATCTTCTTTGATGAACA
TTTACCAAAGAGCTTTCTTGCAAATTCCGACACGGCAGGAATTAAAAGTC
GGGCCGCGTATGATATGTGCTCCGATATCATACCCGACACCCGACACACA
TGAACACACGACTCTTCCAACGGCACCCATGACTTAGAGGCCGACACACG
CCACCCACACCACCCTCGGTCACACACGCGTGTATGCACGATAAAGAGGG
CTCGAAGCACCCTTAGAGTAACCGCGACCAGCACGTTGGCTGTTGGTTGG
TGGCGGACACCGCCAGGCATGCAAAAACAAATTACATGTCCTTACATGTC
ACGTGGCACGGACAGGCGTTCGTTGTTTCAAACCACGAAACACACGCAGC
AGTTTCCCGATAGTACTAGACCAGCCAAGACACAGCAGTCGCGTACTCAC
TCCCTTTTCCACCAATTGACATGAAATCTTCCTGGCTGTGACCACAATTT
ACTGCTCTCCATTAATGGGGCGTTGGGTTGGAGGTGGGCCCACCCAATCC
CCAGAGAGAAGCGTCGCTCGTTGTTTGAACTACCAACAGACAGCCAAACC
TGGCCTCTTACATACTTGGAAAAAAACTACGAAGTACTTGTCATGCCGTC
TGAAAAAATGGTTCCACATCACTGCAACAAGCAGCAAGCAGATCTGATAC
ACGGCAAAACTGTCCTCTGTCGATTGAATTACCCCGCTTCCAACCCAACG
CCCCATCAATGTAGGCAGGTGAATATAAGTGATATCCAGGAAGTTTTGCG
TTTAGAGGTGTGGCGTAGGGAACGAGATGGTGACTGCTCATAAAGTGTGG
TGTATCTGACCTATATCTCTTCGACCTCTCCATGACCGGCTACTGTCGAT
TGGAAACATGCATACGCACGTGAGTCTCATACAAGCAGCGAGCCGGTGCT
CATTTTTTTGCATGGATGTATGGCACGCTCCCACCACCCACCGGCGATCA
AGGTCTTGGCACGGTGACTTGCGATCTCCCTACCTTCAGATGCCATGGCG
CAGTGTGGTTATATTTTTCCATAACATTCGTTAACACAGCCAGCCGCAGA
CCAATCCCACCTGGAAAAATAAAGAAGCCGGGAGAAAATTAGGATTAAAA
GAGTTCAGTGACCATAAGCGGCGGTACAAAATCTTTGGGAAACAAAGCTC
CAACATGCTGTCAATGATCTTGCGAAAAATTAGCATTTTGACGAAAATTC
CTGTCTTGATTAAATCCGGTGAGACTATAGATAACAATAAGAATAGTAAC
TGGTCCTTGCACACATACATCAGTATCCCTCGCCCTTTACATATGGCAGG
AGTAGCGCTGCCACCTTACGTACACCTTTTCTGCTGAAAGCTCCCATACG
CGAGTTGCACCCACTATCGTACTGCGTGGCGTACCAGACAATGGTGTTGG
CTATCGACGTCTATCTCGAGGTCGCAACACTGATGAACTTACCGCTCCTG
ACACTGCTCAGACTCAATCTTCTGCTTGAGAATTTGCTGTTGATCAGCTG
TGAATCTCGAGCAAGGCCGCTCCAGAGAAAGACCAGTCCAGCGTCAGTAA
CGGCGGTGAATATGACCCTTGTCATGTAGGCAATAGATATTCGCAGACAC
CGGAAGGGTGGTGGAATACATGAGCGATGTAGAGAAGACCAATCTCATAT
GATAGTACTGCAATATACCAGGCACACCAGATCGTTCGATGTTTGACAAC
CTCCTTTCGGTACACACGCTCCGACTTTTGTAGGAATGGTACGATGACGT
CTCCCATCTTTTCCGTAAAGACCCATCCCACATGAGATTTGTGGTGTTTT
GATAGGTCAATACAACAGGGACTTTTTGCCTCATGTAGGTTATTCCACTT
TGTATTCGCTGCTAATTTATTCTAGGCTTCATCCGAAGAAAGACTAATGC
ACTGATGATGTCTCTAATGTCTTTGTAGATAAAAAGAAAAGAAAATAATC
GAATCAAACAGAGCTGGTAATAAAACAAACGTCAATCATTCCACTAGCTC
TGTGCGCATGTGTGTGATTCGGCAGTGTCGAGCTTGCCGTGCAAAGTCAT
GCGCGGGCTGATGTCAATTCAGTCGTATGCCGCGCTCTCTCCAACAATGT
CGGGCACGTGTCAGTCCCTGGAGAAATAATCGCCCATTTCTCTCTTATTC
TCACAAAACATATCACAGCACGGAGTCCCCGGCCTCGACTTACGGTTACA
CACCACGTCAATCTGCTGGTGCACCCGGCTTGTGCTGATCCCGAAGTAAA
AAAATAATGTGGTAGCATTTCCAACAAGCCGCACACCCTCAGAGTTTCAG
CCGATTTGGTCGATTCTACGAGTGCGCTAAAACTAGCGTGTGAAGCTTAT
TTTGGACGACTTACCCTGATATTTCGGCGATGTTTTTGGAGGTAGGCATA
CCATTTTTCTCGACACGAAATCAACCTGGTCGTGCCTTTTAGAATTCAAA
TCGGATTGGGTCGATCGAAAGCAACTGATTGCCGGCCCATCGCCAGCGCT
GTAGTGTTGATCCTAAAGTATACTCTTGATTTTTCAGTTCTATGATCAAC
TCTGCTGTAGCCGATATTCAGCCGATTTAGGCCATTTTATCGATGCGTAA
CCTTGGCGTGAAATTTTTCTCCCGAGAGCGGAAATCGCCGACAATATGAA
GGCGTTCTTCCCCCGATCGCGGAAAATGAACGTGGGGAAAAAATCGCGAA
TATTCGATTGTAGGGAAACGGGTCATTTCGAGAAACGTAGCCAACACACA
CCACACCCACCCTATAATATAGCAGCAACAGCAGTGCAGACCGCAAAACA
AAGATCAGGGTACCCGAGACAAAAACGCTGGCAAGCAAACCCACCGCTAC
TCTGCACCTTCCGGCAGGTGTGGCGATGAGTTGATGAAAAAGTTACAACA
GGAGAAATGTGAGGGAATCGGAATATTTCATTGCGCCGCTAGTCTGCCCG
TTTTATTAATGCTTCACCAAGACACACCCTGCTGGCAACCCCTTTTAAGC
CAGCGAACAAGCTGTGACAACCGCGTAGTACCAGCGTGGTCGAGGGCCAC
GATCATGTAGACATCCATTTCGAAAGAATTAGGAGTTCGGAGGCCTTGGC
TCTGATGCTGTCTGATGTCGTGAATTTAAGCTTGTGAGTGCAACCGATAC
ACACCACCAGCGCGATTTGGAAGCGTCTCACAGCACACACCTTCTTCTTG
TGATCCCCGTTGAGCCTCACACGAGCTACGACAATCGCCTAGCGCCAAGG
ATACTGAGGGTCACTATCATGCAGACCTTCGTTTCGAAAGAGCCAGGACT
TGGGAGGTCTTCAGTCTCTCTTGCTGCCTGCTGTTGTGTCATGTGCTTTG
TTTGGTTTTACAACGAAAAAGCACCATCGCCTGTTCGATTAGAACGGAAA
TATTTTCAAGGTTTGTGCCTCATGAAATAGTTGAGAGAAACCTGAAACTT
GGCGGCCTGATTAGAAAGAGCCTAAGAAAGAGAAATTCAGTGTTTCTTAG
ATGTTTTCCCTTTTTGGTCTGGGTTCGAGCAGCCGTCATGTCGTTTTGAT
TTGCTGAACTGTGTAACTAACTTTATCGCGACGATTACTCTTATAATCTA
TTAGAATCGTGAGATACACAGGACCCAATTTTCTCGATACGATCCCACCT
ACTCTTGGCCTTGCCCCAATTGAGTTTCAACGAGGTAAGTTGACAAGCAC
AGGAATGGTAGAACTGTTTTTGTTTTTCGTCATCCTCTCTATTGGCGAAG
AACAATCGAGAGGATCTGCTGGCTAACATGTGAATCGGGAAACGTTCGAA
ACTTTTGCTGCACTCGTTCACCGGCCATCTACCCCCTTTCTGTTGTTGGC
TTACATAATTCAGCTATCCCCGGGTGAGTTCTCTAGGAGGGCGTGCGCGG
AGCTCAGTGTTGGCTCTGCTTTTGTCCAACCAATGGCGCAGTCCATTAGC
CAACAACTGATAGAACACAAGCGAAAATTCCCCGGATGGACATTGGAGGG
GATGGTTGCGCCGGCGGCTGAGAATATCCAGGTTTTAGACATCGACGTTC
GGTTTCGATCAATCATATACCGTGATCAAGTGCGATGGGACATCAACTGC
CTACACAACAGTCCAGAGCGCTTCGCGAGGAGCACAGTCGCGGATTTGAA
CTTGCCGCAGGCAAGTGTTAGGAGCAGGATGCCCAGTACTGTTCATTTCT
GCCCGATCGATGAAAATTTTTAGTCGAGGGCTATAGGTTGTAAATCAATC
GCAACACCCAAAACTGGGAAACCATTGCAAATATCCAACCGAAGACTTTT
CGTGCCGTGTTATCCTTACGTTCTCCACCTTCACAATTGGGGTCGTGTCA
AATACTCGGTTACTATCTCAACGATACATGCCGCGCAACATTCGATACGA
AACTTTACAGGAAATGGAACCTACTATTGCGCTGATTCTACATCAACAAG
TTTCCAACCATCGCATGGCGGCACCATCGTCAATCTCAAGCAGCGAGGGG
TGCCATTTCAAAGACATTGAAGGTCCTTGCATTTCTCCTGTGCAGCCCGT
TGATCAAAACGAGTTCAACGCACGAAATTGGAAGCACAATAGGTGACTCA
CGAGTGATTGAAATATTTTGCGAAAACTATATTTTCTTCCATGGTGGTCG
TTTCGATTATCTTGGTAGTTTTAGTGCCTCAAAAGTCGCCTTACTTCTCC
TGTGTGCTCACGATTTGTCATGCCAGACACAGCAATCCATAGGTCTGTGC
ATATTTATTTGGTGTCAACGCCCGGCGTACACGTTTCCGACGTGTGATGT
TAAGCAGCGAGAGACCTCCACGTAACTCAACTGTGCGGTATGGTTTGTTG
AGTCGCCTATGACCCCCACCGCCTCCTACGGTGACTGCGATCATCAGTAC
CCGTAGATGGTCGTTGCCGAGTTCGATGTGACTGCTGCTGAATATTCGGT
ACAATTCTATTTTGCAGTTCTAGCAGTCCATCGCCGACTTTTTAACCCTC
GCATCGTGTATTTTATTGCCATTTGCAGACCTGCGTCCAGCAAGGCAAAC
TGCTGAGCTTCGAGAACTCGGTGGCACGACCGTAGGTCGGCAAGAAAAAA
CGTGTATAATACAAAAGGGGGTATGTTCTTGCGTGTGTTGTGCAAGAGGG
GAGCAATCAGTAGGTCATACCCGACGATGAGCTAGACTGAATGTGGTTGC
TCCTGCCGGCGGCGGTACACTGGCAAGTACAGTAGAGCTTTGTGAGACCT
CAGCAGTGAGTAGCGGGCCATCGCATTCTCGATACCAGAGTTCGTTTTAC
ATCGAACCTCACCTTTGCACGCACCAGCGACCAAATTGGTTCAAACCGCA
TACAGAGGGTCACGGAATGGTGATTGATTCCGTTTGTGGATTTGAGGTCT
GGTTTTGAAAATACATTGCTGAAATTGGGACGCGAGTGCGGTCATTAACT
TCCACGAGTGCTGAAGAAAATCGTCCTGTATTATCACTGACATTTTCCCT
TCTGTCTGCACGTGTTGTTTTTGTGCCGAGCGATGCTCGATGCGTTTTTC
TGGCTCCGATTTATTTTTGGGGATTCTGAGGATTCCCCAACGCTGCCGAA
GAGAGAGAGCGAGTGCCAGTGATCTCAAAAATTACTTCACGCACTGGAAG
GCCACACCGCCTTGTTCTACCTGCATCTCTGCAGCAGTCATTCATCCTTG
TAACCTTTGGTTCGTCCCACCGCTGGTCCTTCCGTGTATTTATTGTTGGT
TGTTGTCTTCGTTTCGATAGAACCAAAACATCCATGAAGGCGGGCCTGGG
TCAAGCAGGGTTGGAGG

Coding sequence (CDS) from alignment at P-littoralis_Contig204:2651..17017-

>mRNA_P-littoralis_Contig204.1.5 ID=mRNA_P-littoralis_Contig204.1.5|Name=mRNA_P-littoralis_Contig204.1.5|organism=Pylaiella littoralis U1_48|type=CDS|length=555bp|location=Sequence derived from alignment at P-littoralis_Contig204:2651..17017- (Pylaiella littoralis U1_48)
ATGTACTTCGAGAGTGTATCACGGGTGAGACTAATAAGAGATATCATCCC
CAAGAGCTGGAAGCTACCCATTCTATCCCCGGGTGAGTTCTCTAGGAGGG
CGTGCGCGGAGCTCAGTGTTGGCTCTGCTTTTGTCCAACCAATGGCGCAG
TCCATTAGCCAACAACTGATAGAACACAAGCGAAAATTCCCCGGATGGAC
ATTGGAGGGGATGGTTGCGCCGGCGGCTGAGAATATCCAGGTTTTAGACA
TCGACGTTCGGTTTCGATCAATCATATACCGTGATCAAGTGCGATGGGAC
ATCAACTGCCTACACAACAGTCCAGAGCGCTTCGCGAGGAGCACAGTCGC
GGATTTGAACTTGCCGCAGGAAATGGAACCTACTATTGCGCTGATTCTAC
ATCAACAAGTTTCCAACCATCGCATGGCGGCACCATCGTCAATCTCAAGC
AGCGAGGGGTGCCATTTCAAAGACATTGAAGGTCCTTGCATTTCTCCTGT
GCAGCCCGTTGATCAAAACGAGTTCAACGCACGAAATTGGAAGCACAATA
GGTGA