mRNA_P-littoralis_Contig203.96.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig203.96.2
Unique NamemRNA_P-littoralis_Contig203.96.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A6H5L0V1_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V1_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 2.520e-72
Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 2
Query:    2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQVSARI 322
            GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ  ARI
Sbjct:   24 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ-RARI 129          
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: D8LQX5_ECTSI (UBC core domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX5_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 4.220e-72
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 2
Query:    2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 307
            GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ
Sbjct:   24 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 125          
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A835ZQ60_9STRA (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ60_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.640e-70
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 2
Query:    2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 307
            GP+ DDL+HWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ
Sbjct:   24 GPIGDDLFHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 125          
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: B8C0C0_THAPS (Ubiquitin-conjugating enzyme e2-16kda, ubiquitin protein ligase n=19 Tax=Ochrophyta TaxID=2696291 RepID=B8C0C0_THAPS)

HSP 1 Score: 213 bits (541), Expect = 1.020e-67
Identity = 95/103 (92.23%), Postives = 102/103 (99.03%), Query Frame = 2
Query:    2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
            GPV DD++HWQATIMGPD+SPYAGGVFFL+IHFPADYPFKPPKV+FTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP+IAQ+
Sbjct:   24 GPVGDDMFHWQATIMGPDESPYAGGVFFLDIHFPADYPFKPPKVHFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPDIAQL 126          
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A7S2BUY0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BUY0_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.020e-67
Identity = 94/103 (91.26%), Postives = 101/103 (98.06%), Query Frame = 2
Query:    2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
            GPV DDL+HWQATIMGPDDSPY+GGV+FLNIHFPADYPFKPPKV FTT+IYHCNIN+NGGICLDILKDQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAQ+
Sbjct:   24 GPVQDDLFHWQATIMGPDDSPYSGGVYFLNIHFPADYPFKPPKVAFTTKIYHCNINANGGICLDILKDQWSPALTLSKVLLSICSLLTDPNPDDPLVPEIAQI 126          
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A7S2CNF0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CNF0_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.020e-67
Identity = 96/102 (94.12%), Postives = 100/102 (98.04%), Query Frame = 2
Query:    2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQ 307
            GPV DDL+ WQATIMGPDDSPYAGGV+FLNIHFPADYPFKPPKV+FTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA+
Sbjct:   24 GPVADDLFFWQATIMGPDDSPYAGGVYFLNIHFPADYPFKPPKVSFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAE 125          
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A6T8L654_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8L654_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.060e-67
Identity = 93/103 (90.29%), Postives = 102/103 (99.03%), Query Frame = 2
Query:    2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
            GPV DD++HWQATIMGPDDSPYAGGV+FL+IHFPADYPFKPPK++FTTRIYHCNINSNGGICLDILKDQWSPALT+SKVLLSICSLLTDPNPDDPLVP+IAQ+
Sbjct:    4 GPVGDDMFHWQATIMGPDDSPYAGGVYFLDIHFPADYPFKPPKIHFTTRIYHCNINSNGGICLDILKDQWSPALTLSKVLLSICSLLTDPNPDDPLVPDIAQL 106          
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A397APW7_9STRA (UBC core domain-containing protein n=15 Tax=Stramenopiles TaxID=33634 RepID=A0A397APW7_9STRA)

HSP 1 Score: 213 bits (541), Expect = 2.470e-67
Identity = 95/103 (92.23%), Postives = 101/103 (98.06%), Query Frame = 2
Query:    2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
            GPV DDL+HWQATIMGP+DSPY+GGV+FLNIHFPADYPFKPPKVNFTTRIYHCNIN+NGGICLDILKDQWSPALTISKVLLSICSLLTD NPDDPLVPEIAQ+
Sbjct:   51 GPVGDDLFHWQATIMGPEDSPYSGGVYFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQI 153          
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: A0A6G0WK77_9STRA (UBC core domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WK77_9STRA)

HSP 1 Score: 214 bits (544), Expect = 6.410e-67
Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 2
Query:    2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
            GPV DDL+HWQATIMGP+DSPYAGGV+FLNIHFPADYPFKPPKVNFTTRIYHCNIN+NGGICLDILKDQWSPALTISKVLLSICSLLTD NPDDPLVPEIAQ+
Sbjct:   55 GPVGDDLFHWQATIMGPEDSPYAGGVYFLNIHFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQI 157          
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Match: M4BZ46_HYAAE (UBC core domain-containing protein n=27 Tax=Stramenopiles TaxID=33634 RepID=M4BZ46_HYAAE)

HSP 1 Score: 210 bits (535), Expect = 2.530e-66
Identity = 94/103 (91.26%), Postives = 101/103 (98.06%), Query Frame = 2
Query:    2 GPVTDDLYHWQATIMGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQV 310
            GPV DDL+HWQATIMGP+DSPY+GGV+FLNI+FPADYPFKPPKVNFTTRIYHCNIN+NGGICLDILKDQWSPALTISKVLLSICSLLTD NPDDPLVPEIAQ+
Sbjct:   24 GPVGDDLFHWQATIMGPEDSPYSGGVYFLNIYFPADYPFKPPKVNFTTRIYHCNINANGGICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAQI 126          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig203.96.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0V1_9PHAE2.520e-7298.13UBC core domain-containing protein n=1 Tax=Ectocar... [more]
D8LQX5_ECTSI4.220e-72100.00UBC core domain-containing protein (Fragment) n=1 ... [more]
A0A835ZQ60_9STRA2.640e-7097.06Ubiquitin-conjugating enzyme e2-16kda, ubiquitin p... [more]
B8C0C0_THAPS1.020e-6792.23Ubiquitin-conjugating enzyme e2-16kda, ubiquitin p... [more]
A0A7S2BUY0_9STRA1.020e-6791.26Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2CNF0_9STRA1.020e-6794.12Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6T8L654_9STRA1.060e-6790.29Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A397APW7_9STRA2.470e-6792.23UBC core domain-containing protein n=15 Tax=Strame... [more]
A0A6G0WK77_9STRA6.410e-6793.20UBC core domain-containing protein n=1 Tax=Aphanom... [more]
M4BZ46_HYAAE2.530e-6691.26UBC core domain-containing protein n=27 Tax=Strame... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig203contigP-littoralis_Contig203:378826..384051 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LQX5
Preferred nameUBC4
PFAMsUQ_con
Model size600
Max annot lvl2759|Eukaryota
KEGG rclassRC00052,RC00156
KEGG koko:K00252,ko:K06689,ko:K10746
KEGG ReactionR02487,R02488,R10074
KEGG Pathwayko00071,ko00310,ko00362,ko00380,ko01100,ko01120,ko01130,ko03430,ko04013,ko04120,ko04141,ko04624,map00071,map00310,map00362,map00380,map01100,map01120,map01130,map03430,map04013,map04120,map04141,map04624
KEGG ModuleM00032
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000152,GO:0000209,GO:0000502,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006515,GO:0006807,GO:0006950,GO:0006984,GO:0006991,GO:0007088,GO:0007154,GO:0007165,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009896,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010559,GO:0010564,GO:0010604,GO:0010628,GO:0010638,GO:0010965,GO:0016485,GO:0016567,GO:0016740,GO:0019005,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0023052,GO:0030071,GO:0030163,GO:0030674,GO:0031146,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031331,GO:0031399,GO:0031461,GO:0032182,GO:0032268,GO:0032270,GO:0032436,GO:0032446,GO:0032933,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033554,GO:0034605,GO:0035103,GO:0035966,GO:0035967,GO:0036211,GO:0042221,GO:0043130,GO:0043161,GO:0043162,GO:0043170,GO:0043224,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045893,GO:0045931,GO:0045935,GO:0045944,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051603,GO:0051604,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051788,GO:0051983,GO:0051984,GO:0060049,GO:0060090,GO:0060255,GO:0061631,GO:0061650,GO:0062033,GO:0065007,GO:0070647,GO:0070887,GO:0071218,GO:0071310,GO:0071501,GO:0071629,GO:0071704,GO:0080090,GO:0090068,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902680,GO:1903018,GO:1903052,GO:1903364,GO:1903506,GO:1903508,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990234,GO:2000112,GO:2001141,GO:2001252
Exons4
Evalue2.47e-61
EggNOG OGsCOG5078@1|root,KOG0417@2759|Eukaryota
EC1.3.8.6,2.3.2.23
Descriptionprotein modification by small protein conjugation
Cds size378
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig203.96.2prot_P-littoralis_Contig203.96.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig203 381881..383872 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789996.2120116-UTR-P-littoralis_Contig203:378825..3788551680789996.2120116-UTR-P-littoralis_Contig203:378825..378855Pylaiella littoralis U1_48UTRP-littoralis_Contig203 378826..378855 +
1680789996.2233741-UTR-P-littoralis_Contig203:381867..3818801680789996.2233741-UTR-P-littoralis_Contig203:381867..381880Pylaiella littoralis U1_48UTRP-littoralis_Contig203 381868..381880 +
1680789996.2648172-UTR-P-littoralis_Contig203:383872..3840511680789996.2648172-UTR-P-littoralis_Contig203:383872..384051Pylaiella littoralis U1_48UTRP-littoralis_Contig203 383873..384051 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789996.2331917-CDS-P-littoralis_Contig203:381880..3819581680789996.2331917-CDS-P-littoralis_Contig203:381880..381958Pylaiella littoralis U1_48CDSP-littoralis_Contig203 381881..381958 +
1680789996.2426941-CDS-P-littoralis_Contig203:382845..3829591680789996.2426941-CDS-P-littoralis_Contig203:382845..382959Pylaiella littoralis U1_48CDSP-littoralis_Contig203 382846..382959 +
1680789996.2541804-CDS-P-littoralis_Contig203:383686..3838721680789996.2541804-CDS-P-littoralis_Contig203:383686..383872Pylaiella littoralis U1_48CDSP-littoralis_Contig203 383687..383872 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig203.96.2

>prot_P-littoralis_Contig203.96.2 ID=prot_P-littoralis_Contig203.96.2|Name=mRNA_P-littoralis_Contig203.96.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=126bp
MGPDDSPYAGGVFFLNIHFPADYPFKPPKVNFTTRIYHCNINSNGGICLD
ILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAQVSARIHDPVSVP
AAVGCCCCWRSSCVEHHPQPSRVSC*
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mRNA from alignment at P-littoralis_Contig203:378826..384051+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig203.96.2 ID=mRNA_P-littoralis_Contig203.96.2|Name=mRNA_P-littoralis_Contig203.96.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5226bp|location=Sequence derived from alignment at P-littoralis_Contig203:378826..384051+ (Pylaiella littoralis U1_48)
TGGACCGGTCACGGATGACTTATACCATTGGTCCGTGAGCTTTGACTTGA GAGAGATTGAACCTTTCGTTGGCACCAACTTGGTAGTCATCTCCCCCCTC TCTTCTCAGCATTACAGAGACTTCGCGCTGACTGGTTGTCGCCCCAGAGA GGTTGGTTGAAAATTGGCGAGTGCCTCTCTTAGCAAGAGGTGTCAGGCGC GTCGGCAGCATCTTTGGTCACGTAGGGCCACACGCTAGCTGCGCCTGTTC CTATCCTCTCTGTTGGGGGATGGTGTGCAACAAATTTCTTACACAGCAGC AGCAGCAGCAGACATATGATATGTGAGCGAAAAAAAAGAGAGTCCACGAC AGCAGCAACTGAAAAACTAAACGAAGAAAAAAACGGGTACAAGTATGATA TGCACGAACAAGAGACGAGCTTCGTTCGACTTCCGGTCGAATGCCCCGAA AACGAGATTTCCCCCGCCAAGGAACAACCAAGTTTCGGGCACTGCGGCGT GGACTCCCCGGTTCACGAGGCAGCTACCATGCAAGCAGTAGCCTTGGCGC TCTTAGGTCGCCAGTGTGACGCTCTACCTGTAGCAGTAGTCCCGTATTCT TGATAATTGTCACCGAGTATGTTCCTGGTACAGCAGTATGTAGGGCACAA CCACGCCGCGCTGGGGTGTGGTTGCTGGGCGTTGGTCTGTCGTTGTGTTT TGTGTGTGCGTTCGTTCCTTCCCGTAACTGGTTATACCGAAACCAAGCAA CACAGCAGAGAGAGAAATAGACGCTCTCACGATTAGACCGTGTGACCCCA GCACGTGGTCCCCCCCCCTCTCCTCCTCCTCGTCTACATCACATCATCCT CGGTCAGTCCGACTCAGCTGCACACGGAAGTGATGCCTACCACAGGCGGC CATCAACAATACCTGGTACAAGAGACGGGAAGAGCGACAGAATGAAACAG AGACGCGAAGCCAGATATGGTCGGGCCAGAAAACAGAATACCCTCTCAGT GGCTTTTAGGTTTTTGGTCGTTGATGTATCTCCGAACGACGCACCTGCTG TGTGCGCTCCTGTGCGTTGTGCGCTGTCTGGTCCCCAAAACAAGAAGGCT CTGATGGTGATTTCGTGATTTCGGGGTGATTTTTTTACTCTTTTCTCTCT TTTCTCTCCTTCTTTTCTTGATTTTCGTGTTTTTTTTTTTCTGCGTTTTT TTTCTTATTGGTCGGGGGAGTTTGGAATTTCGACGACACCGACAATTTGT ATACTCCGAGTACTTCGTATACACGTACCGGTTGTTGAGCCGGGTAACTG CGTAGCTGCGTCGAGAGAGCTGCGACTAACTGCACTGCTGGTGTGCGTTG TGTCTGATGAGTTTGAGAAACACAGGTATCACACCTCGGTGAAACGTACT TCGCTTCGAAGTAAGTGCGAAGTACAGAGTTCTGCTGTTCTGTATCACAC GCCAGTCTTGGTTGCTCATCTCCCCTGTAACCATGCTTCGCACCAGTACA TGTTATCCCCAGTCTTAGAAAGAGACGAGTACGGCTCTATTACATGGTAC CAGGTACGATGTTTGGTACGTATGACCTCTTAACGGCACAGCAGCAGTAT GTAAGTAAGAAAGTTTTTGTGGAGATTGAGATACGAACGAACCCCGTGCA GCAGTAAAATGCCCGCACGAAGGCTCGGGTTCAGTCACCTATGGTGTCAG TAGCTGCTGTTAGACCCACATTTTGTGTGCGGGCGTGTCTGTGTGAACCC GTTTCGACCTCTCGTCAAATCCTAGTAGTGTCCATGGCCTCATCCGATAT CACAGCGGGCGCTTTCGGTTACTTCACGCAGTATAGCCGGAATGCCAGAG TCTCGGAGAATTATACCATCACGAGAGGGATAAATGCTGAACAAAATATT CGAGAGACCGACGGTTCGAGTCCGATTGTGTTTGTTGCTGTTTATGGCGG TGGTCAGTGGCCGTGGTGTGCAGCAGCAGTAGCCCTGTAGCCGGCGCAAA CTGACAAGGCAAACCGGGTATTTTTGATACGCGGGAAAACCCTAGTCGCC CAATTAAAGGTACAGCGGTATGTACGAGTAGTGCACCAATGTATGATATG TACTTCGAAGTACGTACATCCGATAGCGAAGAAGCCATACCATACATGTG TGTTGCCTCAGGTATCATATGATATAATACACGTGACACAATGTGATCCT TTCCTGCGGCGAAGAGAGACAGAAACAAAGAAAGATAGAAAGGGAGATAA GCACACAGCGGTGCTTGCGCAACAGCGTATCATATGTATGAGATGCATAC GGTACGGTATGCGAATCTAACACTGCTGTCTGTAATTCCGTTAATCCCTG ATCCGCATTTCATGGGGTCAGGATGTGACGAAAAAACGAAAAACGAAACA CTACAAGTAGGCTCTTCGACATTTCCAGGGAAATGCGGAGTATATCCTTG AAATGATAATATATACGGAGTACTCCGTACTTCGTACGAAGTTTATTTTA TTTTTCTTACAAAGACATCAAATGTGTTCGCCTCTCCCTGGACGAGGATC CAGCGAGATTAACAGCAAACACAGATTGATGTCATATTTCAAAATTTCAG GTCACGATGTTGAGTCACCCTTACCACCCCACCCCACTAGTAGCACGCAC ATCCGAGAACGCATGTGCTACAATGCTTTGATTAGTTCTGCACGCGCTGC TTCCGCTAGACCGGCTCGACTTGGATAAGATCCGCGTCATGTTCAACATT GAAGTCGTTACATACTACTTCGAAGTATATTTCTCGACCACTCTTTATCC TTATATGATAATTGCTCCCAATCGCTGCATGCGTACTGAATGTACCATAA CGCCACGATGTTACACCCCACAGCGGCGGTGTAGATACGTCGCTACCTCG ACATTCAAGAAACAGCTCACTGTCGAGATAAAGGGCCAGGAATTCAAGGC GCGTTCACCGCTCTCGGCCCTCACCTCACCTTCTGCTACCCCCCCCCCCC CAACCCCCCCCTCCCCGGTCACTACCGTTTGTATCCGCGCAGGCAGGCGA CCATCATGGGGCCAGATGACAGCCCCTACGCGGGGGGCGTCTTTTTCCTC AACATCCACTTCCCGGCGGACTACCCCTTCAAGGTAGGGTAGGGTCGGGA TGTTTACATTGGGTGGGGTAGGATTGGGGTTATTTACATTGGGTAAGGTG TCGTTGAGTGGGGTTGGGTTGGGTTGGGTGTGGTTGGGTGTATGATGGAT GTGATGACAATCTTACAGTCGAGTGAGATGCACTCTCCTGGCCATTTACT TGTAAAAGCACGTGTCGGGAGAGGGGGGAGGGTTTTTTGTGTCATACCGA GAGGGATATTTCGTGCCGGCCCTACTACTGCTGCGTACACCCTTGTCTCA AATATGGAGTCGGATTTCGCAGAAACGAACTTTTACGCTTGTGGGAGTCA GCACAGCAGTACCGGTAGTATGGCGCCACTCGGGGGGGGTCAAAACAGTA CAGCGCTTCCAGCGGCAACAGCATACAAGAGTTACGATGCCGAGACTCTA GCTGACGACACAAACCGCGAGAAATAAAGTGTCTCTACGGTCTCTAGGGT TAATTAAGGGGGCGTGTCTTCCGGGTGTTCTTTATATTGTCTGCCTGCCC ACCATCTCTACTGCTGTATGCACTACGGTGGCAGGGGCACCGCCGTTTGC GTTGGCGGTCCACGTGTTTAGGGCCTGTTTACCGGGCGCGGGATAGGTGT GTTGGTTCCCTACCGGAGCAGGGCTTTTTTTTCCACGACGCTGGCAAACG CCTACGTACCTTTTAAGAACCTCACGTTCCGCCGGCCTGAGGCCAGGGGG ACACGAGTGATGCCCATGATGTGTAAGTGTTACATCAATATTTGCTCGAA TCCCTGGTTTTCCCGTGATATTTGTGCTTGCTTATCTAATAGCCACTTCT GTCCCCTGGACCCCCCCCCCCTCCCCCATGCACGCCGCTCTCTGTCTCTT GAACCCCCTCTATGTCACAGCCGCCCAAGGTCAACTTCACGACGAGGATC TACCACTGCAACATAAACAGTAACGGGGGTATCTGCTTAGACATCCTGAA AGACCAGTGGTCGCCAGCTCTCACAATCTCCAAGGTAATTTCGCCTCTCC CTTCCTTCCTTCCTTTCACTGCTTGTAATCGTACCGATAGTTACTCCTCG TGAAAGAAACAAGCAATCCAACCTGTGCTTGGGGAAGTACGACCGCTTTG GAGCGCAGTTCTTGTCGTGTGGGGTTGGTGTCCGCTCGCGTGCGTGCGTG TGGAGTGTGTGTAGTGGGTAGGTGGGTGGGGGTGGGTGTGTTTGTGTGTT TTTAATGTATAGACGCGTTGGTTGATTTTGCTTTCAGTCTTTGTCTGTCG TTGTTTCGAGCCACATGGTTTTGTTCACTTCGGTTTTGTGGATCGCTCCT ACAGACGGGTACCGGGCTTCCTCGTCAGCACGTGAAGTGAGAATGTTACG GCGTCATGACTGATGAGTCCGTGCGAGCCCTGGCCTCCTGCTTGCCGTGG ACGCATATTTAGCACAAGCAGGAGCATGCACCCACACTTCCCCCCTCCCC CAATATGGAGTCGACCTGAAGCAATGCTGTTGTGACCGGGAGAGCACCGC CCGCTCGACCGTTTCGGGAGTTACCCAGCCTTTTATGACGTTCCTGGCCC TTCGCGGCCCCCCCTCCCTCCTTAGCCTGCTCCATTTGCCATCCGCTCGC GCTTGCTCCAACCTCAATCCCTCTGTTTTTCTCCCGCCGTGTAGAACACC CCCCCCCCCCCCCCCCGATCCCTTATTTTGCTGTCAATGTATTGTTTTTG TTTTGTATCAGGTCCTTTTATCTATTTGTTCCCTGCTCACCGACCCCAAC CCGGACGACCCACTCGTACCAGAGATCGCGCAGGTCAGTGCACGTATTCA TGACCCGGTGTCCGTTCCCGCCGCTGTCGGTTGTTGCTGTTGTTGGAGGT CGTCATGTGTAGAGCATCACCCCCAGCCGTCTCGTGTCTCGTGTTAGACG TTGTTGTTGTTGCTGTTGCTGTTGCTGCTGCTGCTGCGGCCGCTGTTGTC TCGACGCTAGAAGAATTCTCCCCTCTCACCCGCTTTCCCACCCCGTGCTT GTAGGATACGTGAAATCAACCGCGCGCACGTGAACACAACCGGCTGGTCC GTTTCGTTCTCGCCGCTGAGGTCGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig203:378826..384051+

>mRNA_P-littoralis_Contig203.96.2 ID=mRNA_P-littoralis_Contig203.96.2|Name=mRNA_P-littoralis_Contig203.96.2|organism=Pylaiella littoralis U1_48|type=CDS|length=378bp|location=Sequence derived from alignment at P-littoralis_Contig203:378826..384051+ (Pylaiella littoralis U1_48)
ATGGGGCCAGATGACAGCCCCTACGCGGGGGGCGTCTTTTTCCTCAACAT
CCACTTCCCGGCGGACTACCCCTTCAAGCCGCCCAAGGTCAACTTCACGA
CGAGGATCTACCACTGCAACATAAACAGTAACGGGGGTATCTGCTTAGAC
ATCCTGAAAGACCAGTGGTCGCCAGCTCTCACAATCTCCAAGGTCCTTTT
ATCTATTTGTTCCCTGCTCACCGACCCCAACCCGGACGACCCACTCGTAC
CAGAGATCGCGCAGGTCAGTGCACGTATTCATGACCCGGTGTCCGTTCCC
GCCGCTGTCGGTTGTTGCTGTTGTTGGAGGTCGTCATGTGTAGAGCATCA
CCCCCAGCCGTCTCGTGTCTCGTGTTAG
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