mRNA_P-littoralis_Contig203.79.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig203.79.1 vs. uniprot
Match: D8LQY0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY0_ECTSI) HSP 1 Score: 288 bits (737), Expect = 9.030e-92 Identity = 181/291 (62.20%), Postives = 195/291 (67.01%), Query Frame = 1
Query: 163 PGSYEMPASREQAAAAVAAIAARQEGMASGAQPQIPLPPASVLGENGVDMVGDSLSKNPWSRDEDDSLMRLVEQYGAKRWSVIAMHLPGRIGKQCRERWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGPGAIPTGNIESDGLPGTVLGPGAAATAGGLPGIGLNGDANEAARLLQAAVDLRKQ--------AASQGG-AGGIQPEMVANAQAKAQAAAGALAVGPMHHVRDLAQAAAAQAAQAAALHAVSKGA 1008
P Y +PASREQAAAAVAAIAARQE +ASGA P+IP+P A+VL ENG M GDSLSKNPWSRDEDDSLMRLVEQYGAKRWSVIAMHLPGRIGKQCRERWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPG + E+DG P V G AA GG+P G+ GD + A +GG AG I+PEMVA+AQAKA+AAAGALAVG M VRDLAQAA ALHA SKGA
Sbjct: 98 PMPYGLPASREQAAAAVAAIAARQEALASGAHPKIPMPSAAVLVENGGGMDGDSLSKNPWSRDEDDSLMRLVEQYGAKRWSVIAMHLPGRIGKQCRERWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPG---------------------------------SGETDGAP-PVPGVVAAGPDGGVPP-GMGGDVSSLXXXXXXXXXXXXXXXXXXXXAAIQEGGDAGAIRPEMVADAQAKAEAAAGALAVGRMGQVRDLAQAAXXXXXXXXALHAASKGA 353
BLAST of mRNA_P-littoralis_Contig203.79.1 vs. uniprot
Match: A0A2P4Y2W3_9STRA (R2R3 Myb protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y2W3_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.880e-59 Identity = 89/115 (77.39%), Postives = 106/115 (92.17%), Query Frame = 1
Query: 319 DSLSKNPWSRDEDDSLMRLVEQYGAKRWSVIAMHLPGRIGKQCRERWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGP 663
DS SK PW+R+E+D LM+LV+QYGAKRWS+IAMHLPGR+GKQCRERWHNHLNP VRKDAW EED +IF+ H+++GNQWAEI+K+LPGRTDNAIKNRYYSTMRR+QRQ++RK GP
Sbjct: 45 DSNSKRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPLVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQSIRKKGP 159
BLAST of mRNA_P-littoralis_Contig203.79.1 vs. uniprot
Match: A0A3R7G675_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G675_9STRA) HSP 1 Score: 205 bits (522), Expect = 7.410e-59 Identity = 89/115 (77.39%), Postives = 106/115 (92.17%), Query Frame = 1
Query: 319 DSLSKNPWSRDEDDSLMRLVEQYGAKRWSVIAMHLPGRIGKQCRERWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGP 663
DS SK PW+R+E+D LM+LV+QYGAKRWS+IAMHLPGR+GKQCRERWHNHLNP VRKDAW EED +IF+ H+++GNQWAEI+K+LPGRTDNAIKNRYYSTMRR+QRQ++RK GP
Sbjct: 87 DSNSKRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQSIRKKGP 201
BLAST of mRNA_P-littoralis_Contig203.79.1 vs. uniprot
Match: A0A6H5LIC0_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIC0_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.070e-58 Identity = 112/166 (67.47%), Postives = 118/166 (71.08%), Query Frame = 1
Query: 457 WHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGPGAIPTGNIESDGLPGTVLGPGAAATAGGLPGIGLNGDANEAARLLQAAVDLRKQAASQ--GGAGGIQPEMVANAQAKAQAAAGALAVGPM-HHVRDL 945
WHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGPGAIPT E RLL+ A +LR+QAA Q G AG I+PEMVA+AQAKA+AAAGALAVG M H DL
Sbjct: 5 WHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGPGAIPTALTE---------------------------------RLLKEAANLRRQAAIQEGGDAGAIRPEMVADAQAKAEAAAGALAVGRMGQHNSDL 137
BLAST of mRNA_P-littoralis_Contig203.79.1 vs. uniprot
Match: H3H745_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H745_PHYRM) HSP 1 Score: 205 bits (522), Expect = 1.150e-58 Identity = 89/115 (77.39%), Postives = 106/115 (92.17%), Query Frame = 1
Query: 319 DSLSKNPWSRDEDDSLMRLVEQYGAKRWSVIAMHLPGRIGKQCRERWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGP 663
DS SK PW+R+E+D LM+LV+QYGAKRWS+IAMHLPGR+GKQCRERWHNHLNP VRKDAW EED +IF+ H+++GNQWAEI+K+LPGRTDNAIKNRYYSTMRR+QRQ++RK GP
Sbjct: 74 DSNSKRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQSIRKKGP 188
BLAST of mRNA_P-littoralis_Contig203.79.1 vs. uniprot
Match: D0N805_PHYIT (Myb-like DNA-binding protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N805_PHYIT) HSP 1 Score: 205 bits (522), Expect = 1.250e-58 Identity = 89/115 (77.39%), Postives = 106/115 (92.17%), Query Frame = 1
Query: 319 DSLSKNPWSRDEDDSLMRLVEQYGAKRWSVIAMHLPGRIGKQCRERWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGP 663
DS SK PW+R+E+D LM+LV+QYGAKRWS+IAMHLPGR+GKQCRERWHNHLNP VRKDAW EED +IF+ H+++GNQWAEI+K+LPGRTDNAIKNRYYSTMRR+QRQ++RK GP
Sbjct: 100 DSNSKRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQSIRKKGP 214
BLAST of mRNA_P-littoralis_Contig203.79.1 vs. uniprot
Match: A0A225WNS1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WNS1_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.310e-58 Identity = 89/115 (77.39%), Postives = 106/115 (92.17%), Query Frame = 1
Query: 319 DSLSKNPWSRDEDDSLMRLVEQYGAKRWSVIAMHLPGRIGKQCRERWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGP 663
DS SK PW+R+E+D LM+LV+QYGAKRWS+IAMHLPGR+GKQCRERWHNHLNP VRKDAW EED +IF+ H+++GNQWAEI+K+LPGRTDNAIKNRYYSTMRR+QRQ++RK GP
Sbjct: 83 DSNSKRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQSIRKKGP 197
BLAST of mRNA_P-littoralis_Contig203.79.1 vs. uniprot
Match: G4YSZ1_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora sojae TaxID=67593 RepID=G4YSZ1_PHYSP) HSP 1 Score: 205 bits (522), Expect = 1.570e-58 Identity = 89/115 (77.39%), Postives = 106/115 (92.17%), Query Frame = 1
Query: 319 DSLSKNPWSRDEDDSLMRLVEQYGAKRWSVIAMHLPGRIGKQCRERWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGP 663
DS SK PW+R+E+D LM+LV+QYGAKRWS+IAMHLPGR+GKQCRERWHNHLNP VRKDAW EED +IF+ H+++GNQWAEI+K+LPGRTDNAIKNRYYSTMRR+QRQ++RK GP
Sbjct: 82 DSNSKRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQSIRKKGP 196
BLAST of mRNA_P-littoralis_Contig203.79.1 vs. uniprot
Match: A0A0W8DMT8_PHYNI (Histone-lysine N-methyltransferase setd3 n=23 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DMT8_PHYNI) HSP 1 Score: 205 bits (522), Expect = 1.780e-58 Identity = 89/115 (77.39%), Postives = 106/115 (92.17%), Query Frame = 1
Query: 319 DSLSKNPWSRDEDDSLMRLVEQYGAKRWSVIAMHLPGRIGKQCRERWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGP 663
DS SK PW+R+E+D LM+LV+QYGAKRWS+IAMHLPGR+GKQCRERWHNHLNP VRKDAW EED +IF+ H+++GNQWAEI+K+LPGRTDNAIKNRYYSTMRR+QRQ++RK GP
Sbjct: 100 DSNSKRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPSVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQSIRKKGP 214
BLAST of mRNA_P-littoralis_Contig203.79.1 vs. uniprot
Match: A0A6A3UHX4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UHX4_9STRA) HSP 1 Score: 205 bits (521), Expect = 3.240e-58 Identity = 89/115 (77.39%), Postives = 106/115 (92.17%), Query Frame = 1
Query: 319 DSLSKNPWSRDEDDSLMRLVEQYGAKRWSVIAMHLPGRIGKQCRERWHNHLNPDVRKDAWKPEEDLIIFQYHRSLGNQWAEIAKLLPGRTDNAIKNRYYSTMRRLQRQAVRKGGP 663
DS SK PW+R+E+D LM+LV+QYGAKRWS+IAMHLPGR+GKQCRERWHNHLNP VRKDAW EED +IF+ H+++GNQWAEI+K+LPGRTDNAIKNRYYSTMRR+QRQ++RK GP
Sbjct: 75 DSNSKRPWTREENDKLMQLVKQYGAKRWSLIAMHLPGRVGKQCRERWHNHLNPTVRKDAWTAEEDYVIFECHKNVGNQWAEISKMLPGRTDNAIKNRYYSTMRRMQRQSIRKKGP 189 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig203.79.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig203.79.1 >prot_P-littoralis_Contig203.79.1 ID=prot_P-littoralis_Contig203.79.1|Name=mRNA_P-littoralis_Contig203.79.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=338bp APAPEAAPAPAPAPEALGYQGHGAGELSGPGVSHRPPAIVYPHQGVMHPPback to top mRNA from alignment at P-littoralis_Contig203:309280..314913+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig203.79.1 ID=mRNA_P-littoralis_Contig203.79.1|Name=mRNA_P-littoralis_Contig203.79.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5634bp|location=Sequence derived from alignment at P-littoralis_Contig203:309280..314913+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig203:309280..314913+ >mRNA_P-littoralis_Contig203.79.1 ID=mRNA_P-littoralis_Contig203.79.1|Name=mRNA_P-littoralis_Contig203.79.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1014bp|location=Sequence derived from alignment at P-littoralis_Contig203:309280..314913+ (Pylaiella littoralis U1_48)back to top |