prot_P-littoralis_Contig203.82.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig203.82.3
Unique Name	prot_P-littoralis_Contig203.82.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	1098

Homology

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BLAST of mRNA_P-littoralis_Contig203.82.3 vs. uniprot
Match: A0A6H5L2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2M3_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 4.450e-52
Identity = 154/261 (59.00%), Postives = 173/261 (66.28%), Query Frame = 0

Query:  592 ALGIATRSGSLPP-------ADLACAAATSREACRAYRDGRTFHIKVTTDTPRWVWSPPSPPAPRVARGSPPSEGGAGEWGERRAPXXXXXXXXXXXXXXFGGRSQSRVAPIRVSHITWDRNDQDLGEEFALELPLDLERLTFGFAFDR-PVDGVEVDWPPGMKALHFGMAFNPRPXXXXXXXXXXXXXXXXXXXXXXXXXXGNARDVAXXXXXXAKDKKTSEEVTGDGRAGGGWAEFLPPTLEEVVFGGHFNQPVERVKW 844
            ALGI+ RSG LPP          A  AA S+EACRAYR GR FH+KVT DTP+ VWSPPSPP  RV  GS  + G AG  G+                      ++SRV+P+RVSHITWDRND+DLG++FA +LPLDLE LTF FAF+R P DGVE+DWPP +KA+HFGMAFNPRP   XXXXXXXXXXXXXXXXXXXXXXX       XXXXXX             G    GWA  LPP+LEEVVFGGHFNQPVE V W
Sbjct:  990 ALGISARSGFLPPDGDDDTQLPAAAVAAVSQEACRAYRRGRAFHVKVTADTPQHVWSPPSPPPFRVG-GSGRAWGAAGSGGD--------------GDRTGSTTAESRVSPLRVSHITWDRNDEDLGDDFARDLPLDLETLTFAFAFNRLPADGVEIDWPPDLKAVHFGMAFNPRPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------GAGAVGWAVLLPPSLEEVVFGGHFNQPVEGVAW 1224

[Close]

BLAST of mRNA_P-littoralis_Contig203.82.3 vs. uniprot
Match: D8LQX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX8_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.160e-42
Identity = 115/266 (43.23%), Postives = 134/266 (50.38%), Query Frame = 0

Query:  592 ALGIATRSGSLPP-------ADLACAAATSREACRAYRDGRTFHIKVTTDTPRWVWSPPSPPAPRV-----ARGSPPSEGGAGEWGERRAPXXXXXXXXXXXXXXFGGRSQSRVAPIRVSHITWDRNDQDLGEEFALELPLDLERLTFGFAFDR-PVDGVEVDWPPGMKALHFGMAFNPRPXXXXXXXXXXXXXXXXXXXXXXXXXXGNARDVAXXXXXXAKDKKTSEEVTGDGRAGGGWAEFLPPTLEEVVFGGHFNQPVERVKW 844
            ALGIA RSG LPP          A  AA S+EACRA+R GRTFH+KVT  TP+ VWSPPSPP PRV     A G+  + G  G  G   A                   ++SRV+P+RVSHITWDRND+DLG++FAL+LPLDLE LTF FAF+R P DGVE+                PRP                           + R  +                   G     WA FLPP+LEEVVFGGHFNQPVE V W
Sbjct:  731 ALGIAARSGFLPPDGDDDTQLPAAAVAAVSQEACRAFRRGRTFHVKVTAGTPQHVWSPPSPPPPRVGGRDRAWGAAEASGDGGRMGPATATS--------------NALAESRVSPLRVSHITWDRNDEDLGDDFALDLPLDLETLTFAFAFNRLPADGVEIXXXXXXXXXXXXXXXXPRPAAAAIAAAGRP---------------SSPRPSSGGDKAAMVVPXXXXXXXXXGAGAAEWAVFLPPSLEEVVFGGHFNQPVEGVAW 967

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig203.82.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig203.82.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L2M3_9PHAE	4.450e-52	59.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LQX8_ECTSI	1.160e-42	43.23	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 369..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 969..993
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 969..983
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 638..691
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 433..458
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1083..1097
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 388..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..588
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1014..1097
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1026..1045
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 494..512
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 527..543
None	No IPR available	PANTHER	PTHR32134:SF156	SUBFAMILY NOT NAMED	coord: 889..972
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 889..972 coord: 821..928
None	No IPR available	PANTHER	PTHR32134:SF156	SUBFAMILY NOT NAMED	coord: 821..928
IPR008615	FNIP	PFAM	PF05725	FNIP	coord: 879..921 e-value: 9.2E-8 score: 32.1

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig203	contig	P-littoralis_Contig203:337254..343495 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig203.82.3	mRNA_P-littoralis_Contig203.82.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig203 332684..343582 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig203.82.3 ID=prot_P-littoralis_Contig203.82.3|Name=mRNA_P-littoralis_Contig203.82.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1098bp
MDGTSSGGEGAGGGEQQSRVQVESQEALEGEVTAANPTEPLSGDGESAFN
DDGLANDDGVGGGGGGPACSTERTDDDARGSPSPDSGCSGDMSDDESGGD
AQGVGSVTTAADAGNGAEAPAAPASADTASPPLPPPEDVDGGGSVSRGDL
SSGNREEVPCGGARTEAAAAVTASPPPPSEGQDSGGGGGDTVCGDLSSGD
GNDVPDGGVCGGSESAGGGGNAGGVDGSDGSASEDIVDGSVGEKRDGGTS
FRPGTISEVKKVEGEPKVEEQEQQEEEEEEGKNAGSERRGGGGVASCVDP
AAGGGRGSGKRKTGAGAADSAVGSGEDEPTAVADDGVEDNTAVREQGGLS
GARAPVGDKEGGGLPSAGLKALDDDNKNKNKNKNKNKNKNKNNNDNDNDN
EGSEVKYTAASAAAAAAQAVKEEEEDKAYLTAGNSSAGESVEIYFSAGDS
SSGGESSGGGVGGWSAADGDGGGGGGGDVDAETKAPKATPAVEGDATREA
DEVRRDVGAATAPKVKEEAATAADAPDVKNEQSSDSFRVSGVAETEPSMT
EPEPAPEPAESPVETTTAAAATTLAASPPPPRPSAEELAVAALGIATRSG
SLPPADLACAAATSREACRAYRDGRTFHIKVTTDTPRWVWSPPSPPAPRV
ARGSPPSEGGAGEWGERRAPPPLSADDGGGGGGGFGGRSQSRVAPIRVSH
ITWDRNDQDLGEEFALELPLDLERLTFGFAFDRPVDGVEVDWPPGMKALH
FGMAFNPRPAPAPAAAPLPAAAAAAAAAAAAAAAAGNARDVAAAAAVAAK
DKKTSEEVTGDGRAGGGWAEFLPPTLEEVVFGGHFNQPVERVKWPARLKR
LLFGANFKQKIEAADWPETLEHIAFGSYFNLPVEAVKWPKSLRKLVFGTG
FNQPIENCSLPDGLEEIIFGTHFNQPVAGVKWPGSLLRATFGDRFNQPVV
SASWPPSLTHLTFGRGFDQTLTSSSSSPQQQAGGGGGGGGGGWPPVGLIS
VVVGSKFSGDAVDLAEPAAAGEGGTASTPEGSNNRGRSSGSRSSDGDGGG
GGGGGSGFVIKRRLSLRRAKRRGSKLRGGSPLPTPASPSTQHTAPRG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008615	FNIP