prot_P-littoralis_Contig202.23.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig202.23.2
Unique Nameprot_P-littoralis_Contig202.23.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1149
Homology
BLAST of mRNA_P-littoralis_Contig202.23.2 vs. uniprot
Match: A0A6H5KHX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX5_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 6.110e-54
Identity = 643/1251 (51.40%), Postives = 700/1251 (55.96%), Query Frame = 0
Query:    1 MDSSGRGEPDTSDTIDVLKCLRCGQEGCTNVPGLGYQGQGPTMCTEHASPVMIQIVHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGMVDLMKRRSQCVVSNXXXXXXXXXXXXXXXXXXXXXXXXXVYLKNXKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKNCRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKTTPHPPKREGDVNIRLGVAVDPAVLVGLPGGGSNXXXXXXXXPNRSA-------RSP-----------------------EDDFDGG----IGGNGXVNGPGGDRMGGYW-GGMGQQEHRGS---VGVGRAVGRGGSGGMEDIYGXXXXXXXXXXXASIMGWPRSXXXXXXXXXXXXXXXXXXXXXXRQXXXXXXXXXSEDQ-AMRMRRMVQEVGVHDQRQRLTQD------------QQAIKQQHIRSMQTALHRRPGPGQLGGPSLDQNFYGGVPQDDYSHPLGLPPPRSSPQQL--------MTGGVGAGGGGLRSLSRDAHDMRYSAHPVYRDPQQQXXXXXXXXXXXXXXARGYGTPFSYGFMPQMNNTTPHGGGYDPGP-GGDNGDVSVGGVSNVPVSGVLSGRAALRPPGQSQSRSSSVAQPRARRALPPSPGRGXXXXXXXXXXGVPGMSSSGVMEGAG-----EAGRQGGNLSPFVGHQPS---SHLRLPLPPVMGGGSFAPPFQALDWDVGQDGQGDAGGXXXXXXXXXXXXXXXXXSGPGIXXXXXXXXXXXXXXXXXG--------------WPSDTGVSLSHVDYPHA-GGDMGAVGVSSGLPRDDGRRGDV-----VDSSGGG-------------VGGLDMG--IMRQLDPMHGMGDGRGASPGPFHGMGAAAAGVNATGGPPGXXXXXXXXXXXXXXXXXXX---------------SPLMTSALGESSGSSHPGLARLGSG-INGGGGSEA-------------------------------------------SNVLGGALGHDVSPPSPPPHKTERKSPSFDPLSGTPAAAKTESSGGPGIVTQEG------------VGTRGSGSIDGRQQPK 1077
            MD++G GEPDTSDTIDVLKCLRCG EGCTNVPGLGYQG+GPTMCTEHA+P MIQIVHLXXXXXXXXXXXXXXXXXXXXXXXXXXXX    DLMKRRSQCVVS XXXXXXXXXXXXXXXXXXXXXXXXXVYLKNXKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKNCRC   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KTTPH PKREGDV+IRLGV+VD + LVG   GG  XXXXXXXX   +A       RSP                       E ++  G     G      GP G  +   W  G      RG+   V    AV     GG     G            ++ G   +                       Q          +DQ A+RMRR+ Q+           QD                                                 VP D+YSHPLG+PPPRSS            MTGG    GGGLR L+RD+H         YRD  QQ                 YG P  YGF+P M++ +   GGY PG  GGDNG+     V +  V GVL                     P ARR  PPSPGR           G+PGM    +M+        + GRQGG+LSPF+GHQ S   SHLRLPLPP M G  F   FQALDWD   D  G    XXXXXXXXXXXXXXXXX  P +                 G              WPS+  V LSHVDYPH   GDMG       + RDDGRRG       +D  G G             + G+D+G  ++   D MHG+G GR +SPGPFH +GA     +       XXXXXXXXXXXXXXX  X                SPLM S LG  SG + PGLARL +G ++  GG                                              S  LG AL HDV  PSP  H  ER SPSFD LSGTPAA + +   G                    + +RGSGSI GRQ P+
Sbjct:    1 MDNTGGGEPDTSDTIDVLKCLRCGHEGCTNVPGLGYQGEGPTMCTEHAAPAMIQIVHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLMKRRSQCVVSXXXXXXXXXXXXXXXXXXXXXXXXXXVYLKNXKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKNCRCKHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTTPHAPKREGDVSIRLGVSVDASSLVGNLAGGXXXXXXXXXXXXTAAPADRRGHRSPISRPQAAXXXXXXXXXXXXXVRTETEWQTGSAAATGEEERERGPRGTEVAEAWVEGAEMIRIRGTCMRVAAAAAVAMLSWGGD----GKKLVCEIEHVEKALWGISGASALLCVCGNNPGPMGVLGGIGEDQRHQQYASSAVDDQQALRMRRLGQDP---------PQDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPDEYSHPLGIPPPRSSQHXXXXXXXXXXMTGG----GGGLRPLARDSH--------FYRDQLQQQQQHL------------YG-PNPYGFLPHMSSGSQ--GGYGPGAIGGDNGEGLSDVVFSCGVGGVL-------------------FMPHARRPFPPSPGRSGG--------GIPGMPGGXMMDXXXXXXXMDVGRQGGSLSPFIGHQSSASSSHLRLPLPPAMNG-PFQSSFQALDWD---DPSGSGXXXXXXXXXXXXXXXXXXXWWPSLPLEIGDDPWGAASTERRGVGMQGGGSAGGDGGWPSEAAVPLSHVDYPHQEAGDMG-------MGRDDGRRGGGPAEGGLDMEGSGGPXXXXXXXFGTRLPGVDLGQGMIPHFDRMHGIGGGRDSSPGPFHSIGAEVGAASXXXXXXXXXXXXXXXXXXXXXXGAXGETDALNXXXAAGRPMSPLM-STLGGESGETPPGLARLRTGGMSSEGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGLGNALQHDV--PSPSQHNPERSSPSFDALSGTPAAGEVDGPSGSXXXXXXXXXXXXXXXXXXXMNSRGSGSIGGRQPPQ 1170          
BLAST of mRNA_P-littoralis_Contig202.23.2 vs. uniprot
Match: D7G0X0_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X0_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 9.790e-48
Identity = 306/840 (36.43%), Postives = 343/840 (40.83%), Query Frame = 0
Query:  358 KTTPHPPKREGDVNIRLGVAVDPAVLVG-LPGGGSNXXXXXXXXPNRSARSPEDDFDGGIG---------GNGXVNGPGGDRM-----GGYWGG---MGQQEHRGSVGVGRAVGRGGSGGMEDIYGXXXXXXXXXXXASIMGWPRSXXXXXXXXXXXXXXXXXXXXXXRQXXXXXXXXXSEDQAMRMRRMVQEVGVHDQRQRLTQDQQAIKQQHIRSMQTALHRRPGP-GQLGGPSLDQNFYGGVPQDDYSHPLGLPPPRSSPQQLMTGGVGAGGGGLRSLSRDAHDMRYSAHPVYRDPQQQXXXXXXXXXXXXXXARGYGTPFSYGFMPQMNNTTPHGGGYDPGP-GGDNGDVSVGGVSNVPVSGVLSGRAALRPPGQSQSRSSSVAQPRARRALPPSPGRGXXXXXXXXXXGVPGMSSSGVMEGAG----EAGRQGGNLSPFVGHQPSS---HLRLPLPPVMGGGSFAPPFQALDWDVGQDGQGDAGGXXXXXXXXXXXXXXXXXSGPGIXXXXXXXXXXXXXXXXXGWPSDTGVSLSHVDYPHA-GGDMGAVGVSSGLPRDDGRRGDV-----VDSSGGG-------------VGGLDMG--IMRQLDPMHGMGDGRGASPGPFHGMGAAAAGVN--------------------------ATGGPPGXXXXXXXXXXXXXXXXXXXSPLMTSALGESSGSSHPGLARLGSGINGGGGSEA---------------------------------------------SNVLGGALGHDVSPPSPPPHKTERKSPSFDPLSGTPAAAKTES-SGGPGIVTQEGVGTRGSGSIDGRQQPK 1077
            KTTPH PKREGDV+IRLGV+VD + LVG LPGGG  XXXXXXXX +RSARSPE DFD   G         G+G   GP GDR+     GGYWGG    G Q HRGS             G  D+Y  XXXXXXX    +I+GW R                                              QE G                              PGP G LGG                                              +  D    +Y++  V  D QQ                                      GGY PG  GGDNG    GG  ++PVSGVLSGRA L PP Q  S    VAQP ARR LPPSPGR           G+PGM  SG+++G      + GRQGG+LSPF+GHQ SS   HLRLPLPP M G  F P FQALDWD        +G XXXXXXXXXXXXXX    G   XXXXXX            WPS+  V LSHVDYPH   GDMG       + RDDGRRG       +D  GGG             + G+D+G  +M   D MHG+G GRG+SPGPFH MGA   G +                          A                XXXXX    SPLM S LG  SG + PGLARL      GG S                                               S  LG AL HDV  PSPP H  ER SPSFD LSGTPAA + +  SG                SI GRQ P+
Sbjct:  231 KTTPHAPKREGDVSIRLGVSVDASTLVGNLPGGGXXXXXXXXXXXSRSARSPEPDFDAASGVXXXXXKAIGSG---GPDGDRVADRLGGGYWGGGAXXGPQGHRGSXXXXXXXXXDQDPG--DMYAGXXXXXXXD---AILGWGR----------------------------------------------QEGG----------------------------NNPGPMGVLGG----------------------------------------------IGGDQRQQQYASSAV--DDQQ--------------------------------------GGYGPGAIGGDNGPEIGGG--SIPVSGVLSGRAILPPPSQQSSSRGPVAQPHARRPLPPSPGRSGG--------GIPGMPGSGMLDGXXXXXMDVGRQGGSLSPFIGHQSSSASSHLRLPLPPAMNG-PFQPSFQALDWDD------PSGSXXXXXXXXXXXXXXVGVQGXXXXXXXXX------------WPSEAAVPLSHVDYPHQEAGDMG-------MGRDDGRRGGDPADGGLDVEGGGGPXXXXXXXFGTRLPGVDLGQGMMPHFDRMHGIGGGRGSSPGPFHSMGADVGGASXXXXXXXXXXXXXXXXXXXXXXXXXXAMHSSSSGAGGEIDALNXXXXXGRSMSPLM-STLGGESGETPPGLARL---RTTGGMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGLGNALQHDV--PSPPRHNPERSSPSFDALSGTPAAGEVDGPSGSXXXXXXXXXXXXXXXSIGGRQPPQ 860          
BLAST of mRNA_P-littoralis_Contig202.23.2 vs. uniprot
Match: D7G0X1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X1_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 2.400e-29
Identity = 89/98 (90.82%), Postives = 92/98 (93.88%), Query Frame = 0
Query:    1 MDSSGRGEPDTSDTIDVLKCLRCGQEGCTNVPGLGYQGQGPTMCTEHASPVMIQIVHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGMVDLMKRRSQ 98
            MD++G GEPDTSDTIDVLKCLRCGQEGCTNVPGLGYQG+GPTMCTEHASP MIQIVHLXXXXXXXXXXXXXXXXXXXXXXXXXXXX    DLMKRRSQ
Sbjct:    1 MDNTGGGEPDTSDTIDVLKCLRCGQEGCTNVPGLGYQGEGPTMCTEHASPAMIQIVHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLMKRRSQ 98          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig202.23.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KHX5_9PHAE6.110e-5451.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0X0_ECTSI9.790e-4836.43EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G0X1_ECTSI2.400e-2990.82EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 298..360
e-value: 7.8E-7
score: 31.3
coord: 226..289
e-value: 6.2E-7
score: 31.6
coord: 153..212
e-value: 2.0E-9
score: 39.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 952..1148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 634..676
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 712..726
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..558
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..906
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1044..1071
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1126..1148
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 211..243
e-value: 0.0059
score: 17.2
coord: 248..281
e-value: 2.2E-6
score: 28.1
coord: 285..318
e-value: 3.6E-8
score: 33.8
coord: 322..355
e-value: 3.4E-5
score: 24.3
coord: 137..170
e-value: 1.2E-8
score: 35.4
coord: 99..131
e-value: 0.0072
score: 16.9
coord: 23..53
e-value: 1.4
score: 9.7
coord: 60..92
e-value: 3.2E-6
score: 27.6
coord: 174..207
e-value: 1.8E-6
score: 28.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig202contigP-littoralis_Contig202:89309..100729 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig202.23.2mRNA_P-littoralis_Contig202.23.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig202 88739..101204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig202.23.2 ID=prot_P-littoralis_Contig202.23.2|Name=mRNA_P-littoralis_Contig202.23.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1149bp
MDSSGRGEPDTSDTIDVLKCLRCGQEGCTNVPGLGYQGQGPTMCTEHASP
VMIQIVHLRCDHGDCSARRTFGFDGAAAKFCAAHKTDGMVDLMKRRSQCV
VSNCTKLSTYGFEGFLARYCFSHKSNGMVYLKNRKRCEFYECTRQPTYGK
DGQRARYCSSHKEDGMIDVKNCRCKHQGCTRQPNYGHEGGRAKYCSSHKL
TNMVNVVSRRCEFPACKRQPIYGFEGEKATFCPTHRMDAMSDVVNRHCEF
AGCTKTPSYGYVGERAQFCSHHHLPDMEDVKNRRCEWHECRRYPIFGHEG
ERARFCSAHKTDDMVNVRNRRCEEGSCTKLPTHGFPGEKAKACQAHVKNG
MVNLKARKTTPHPPKREGDVNIRLGVAVDPAVLVGLPGGGSNGGGGDGGG
PNRSARSPEDDFDGGIGGNGGVNGPGGDRMGGYWGGMGQQEHRGSVGVGR
AVGRGGSGGMEDIYGGGGGGGGPHGGASIMGWPRSEGGGGSVNPAGVLGG
GSMGGDPRQQQQQQYGSSSEDQAMRMRRMVQEVGVHDQRQRLTQDQQAIK
QQHIRSMQTALHRRPGPGQLGGPSLDQNFYGGVPQDDYSHPLGLPPPRSS
PQQLMTGGVGAGGGGLRSLSRDAHDMRYSAHPVYRDPQQQQQQQQNQHNQ
QSQQARGYGTPFSYGFMPQMNNTTPHGGGYDPGPGGDNGDVSVGGVSNVP
VSGVLSGRAALRPPGQSQSRSSSVAQPRARRALPPSPGRGGNGGNGGNGG
GVPGMSSSGVMEGAGEAGRQGGNLSPFVGHQPSSHLRLPLPPVMGGGSFA
PPFQALDWDVGQDGQGDAGGEGGGGAPGGGGGGGGGGSGPGIGGQPGGGG
GGPGANGGGGWPSDTGVSLSHVDYPHAGGDMGAVGVSSGLPRDDGRRGDV
VDSSGGGVGGLDMGIMRQLDPMHGMGDGRGASPGPFHGMGAAAAGVNATG
GPPGGGVMQPPGGGADAVNGGGGSPLMTSALGESSGSSHPGLARLGSGIN
GGGGSEASNVLGGALGHDVSPPSPPPHKTERKSPSFDPLSGTPAAAKTES
SGGPGIVTQEGVGTRGSGSIDGRQQPKGGGGSGGGGVAATGSGDGGGGGE
VNKTSIKPQENSGGGGGLVRGEGGGSRNNDDGEGDDARKRLRIEELLH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys