prot_P-littoralis_Contig201.98.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig201.98.2
Unique Nameprot_P-littoralis_Contig201.98.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length529
Homology
BLAST of mRNA_P-littoralis_Contig201.98.2 vs. uniprot
Match: A0A6H5J5V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V9_9PHAE)

HSP 1 Score: 489 bits (1259), Expect = 1.820e-165
Identity = 312/548 (56.93%), Postives = 371/548 (67.70%), Query Frame = 0
Query:   17 LPASHGTQPQPNSS-GIAGCAFCGGHAIPFRSKRLSITTSRSSVASNRPPSCSPLSQGCGGSSNACRGKICPLVAAARRW--DGEEDEGGSGDE---RRSGRRRPLRAPWEDIQWSN-SDANSKRRRVGLE-------EDXXXXXXVLGLGERQRGKIQPRVY-RDYDDDYDGDKPRRRRPRADVPDTKSVPSGWDASGWFSGAQQANQGGLFDWARRFYDTLFWYGAASSEDYDELPAMNFQDLLERYDLPAGERPSERPRPIVPPEDLAAEQDFRWRSSGRDSTASAAASTKGASRRRAKPRPSSA----TRSCKQQARRGR-EGEPEWED----EEYRQRGGGRRTAGGRRDGRGEEDELAIAQLRRKQRQLADREYKCEVDLEKVRERLGVVDATVELWIRRSAAMLSRGGSEADTDVLQAKRRIYGLKEEGRQLDDATFELEGRLEDCRAKLDRIVQELQLLGENEVPQAFYTPGDPEE-----TETAEAGTQTW------EEEPE--TSSGNKTKVVEMDSLGLEPEKKLDVEAVPAARDAD 527
            +PASH   P  +SS    GCAFC       RS   S T  +S    +RP SCSPL  G  G S AC G +  + A A RW  DG+E +GG+  +   RR+ RR+PLRAPWEDIQWSN S+ +S+R   G E       +D      +LGL +  R  +QPR Y R YDD     +PRRRR R D+ D + VP+GWD + WF+GAQ+ANQGGL++WAR FY+TLFWYG ASSE  DELPAMNFQDLLER+DLPAGE+ S RPRPIVPPEDLAAEQDFRWR SGR++T  A A+ +  +  RAK R S+A    T S +++ARR R E + +WE     E      GGR    GRR+G  + D +AI QLRRKQRQLA+RE+KCEVDLEKVR+RL VVDATVELW+RRSA MLSRGGSE DTDVLQAKRRIYGLKEEGRQLD AT ELEGRLEDCRAKLDRIVQEL+ LGE  +P+AFYTPG+ ++      ET EAG Q        +  P   T SG+ TKVVE+  LGL  E K   EAVPA  +AD
Sbjct:   13 IPASHAPHPHQHSSVAWVGCAFC---VTGTRSTGSSSTRRQSR---SRPRSCSPLVLGSDGGSRACGGDVGLIAATASRWGADGDELDGGNDGKDRRRRAERRKPLRAPWEDIQWSNPSNPSSRRAARGGERVAWKDVDDEEEEEEMLGLEDGSRSMVQPRGYTRSYDDADVDTRPRRRRSRDDI-DAEPVPTGWDTAQWFTGAQEANQGGLYEWARSFYNTLFWYGGASSEGEDELPAMNFQDLLERFDLPAGEQSSARPRPIVPPEDLAAEQDFRWRPSGREATGGATATAESTNWSRAKGRGSTASGGATGSSRRRARRERDERDLDWESVGRAEREMHAAGGR----GRREGGDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQAKRRIYGLKEEGRQLDSATVELEGRLEDCRAKLDRIVQELEFLGEAAMPRAFYTPGEGDDEIVAKAETVEAGIQAGGGGVKGDVNPSMTTPSGDDTKVVEIGGLGLNAESKRPTEAVPAVTEAD 549          
BLAST of mRNA_P-littoralis_Contig201.98.2 vs. uniprot
Match: D8LRJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ5_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 1.030e-99
Identity = 182/285 (63.86%), Postives = 219/285 (76.84%), Query Frame = 0
Query:  149 VLGLGERQRGKIQPRVY-RDYDD-DYDGDKPRRRRPRADVPDTKSVPSGWDASGWFSGAQQANQGGLFDWARRFYDTLFWYGAASSEDYDELPAMNFQDLLERYDLPAGERPSERPRPIVPPEDLAAEQDFRWRSSGRDSTASAAASTKGASRRRAKPRPSS----ATRSCKQQARRGREGEP-EWED----EEYRQRGGGRRTAGGRRDGRGEEDELAIAQLRRKQRQLADREYKCEVDLEKVRERLGVVDATVELWIRRSAAMLSRGGSEADTDVLQAKRRIY 422
            +LGL +  RG +QPR Y R YDD D+D  +PRRRR R  + D + VP+GWD + WFSGAQ+ANQGGL++WAR FY+TLFWYG ASSED DELPAMNFQDLLER+DLPAGE+ S RPRPIVPPEDLAAEQDF W+ SGR++T  A A+ +G +R R+K R S+    ATRS +++ARR RE    +WE+    E   +  GGR    GRR+GR + D +AI QLRRKQRQLA+RE+KCEVDLEKVR+RL VVDATVELW+RRSA MLSRGGSE DTDVLQ  RR +
Sbjct:    1 MLGLEDGSRGMVQPREYTRGYDDADFDT-RPRRRRSRDGI-DAEPVPTGWDTAQWFSGAQEANQGGLYEWARSFYNTLFWYGGASSEDEDELPAMNFQDLLERFDLPAGEQSSTRPRPIVPPEDLAAEQDFLWQPSGREATGGATAAAEGTNRSRSKDRGSTVSGGATRSTRRRARREREERDLDWENVGRAEREMRAAGGR----GRREGRDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQTMRRDH 279          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig201.98.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J5V9_9PHAE1.820e-16556.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRJ5_ECTSI1.030e-9963.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 442..462
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 466..528
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..528
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..501
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig201contigP-littoralis_Contig201:349364..357932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig201.98.2mRNA_P-littoralis_Contig201.98.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig201 348847..358011 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig201.98.2 ID=prot_P-littoralis_Contig201.98.2|Name=mRNA_P-littoralis_Contig201.98.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=529bp
MHPPGAVHAACLAMVVLPASHGTQPQPNSSGIAGCAFCGGHAIPFRSKRL
SITTSRSSVASNRPPSCSPLSQGCGGSSNACRGKICPLVAAARRWDGEED
EGGSGDERRSGRRRPLRAPWEDIQWSNSDANSKRRRVGLEEDEDDEEEVL
GLGERQRGKIQPRVYRDYDDDYDGDKPRRRRPRADVPDTKSVPSGWDASG
WFSGAQQANQGGLFDWARRFYDTLFWYGAASSEDYDELPAMNFQDLLERY
DLPAGERPSERPRPIVPPEDLAAEQDFRWRSSGRDSTASAAASTKGASRR
RAKPRPSSATRSCKQQARRGREGEPEWEDEEYRQRGGGRRTAGGRRDGRG
EEDELAIAQLRRKQRQLADREYKCEVDLEKVRERLGVVDATVELWIRRSA
AMLSRGGSEADTDVLQAKRRIYGLKEEGRQLDDATFELEGRLEDCRAKLD
RIVQELQLLGENEVPQAFYTPGDPEETETAEAGTQTWEEEPETSSGNKTK
VVEMDSLGLEPEKKLDVEAVPAARDADV*
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