prot_P-littoralis_Contig201.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig201.30.1
Unique Name	prot_P-littoralis_Contig201.30.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	303

Homology

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BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot
Match: D8LRK7_ECTSI (YqgFc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRK7_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 1.840e-112
Identity = 187/261 (71.65%), Postives = 209/261 (80.08%), Query Frame = 0

Query:   45 IHPSVAWLYPA--SSLTSLPTPGGGESIGSSGRKQKKNRTPSRRTMCVDYGTFRVGLAIGVGISPRTVPGITNRGSDLEVARQVLVRARGEGIRDIVASLPHLPDGSETEMCAIVRSFASVLADVGAVSRPSAGVFLWDERFSSAQAGAMLDPYGGGMSRKVEIDSLAASLILEHFFQEGGADNAEKVESSTGVVAAEVLLAAGRKGKADEEEXRRGEREEDAYGEGSRRRFQEMREESARSVAAGEDVSKKYS-RKRRKR 302
            +HPSV+WLYP   SS T++ T        +  R Q+    PSRRT+CVDYGT RVGLAIGVGISPR VPG+TN GSDLEVARQVLVRARGEGIRDIV  LP   +G+ETEMC IVR FASVLADVGA SRP+AGVFLWDERFSSAQA AMLDPYGGGMS KVEIDSLAASLIL+HFF+EGG +NAEKV+ STGVV AEV  AAGR G+  EE+       EDAYGEGSRRRFQEMREESARS AAGED +++ + RKRR+R
Sbjct:   44 VHPSVSWLYPPKPSSTTAVKT--------TDTRSQETKTRPSRRTLCVDYGTRRVGLAIGVGISPRAVPGVTNVGSDLEVARQVLVRARGEGIRDIVVGLPLERNGTETEMCEIVRGFASVLADVGAASRPTAGVFLWDERFSSAQAAAMLDPYGGGMSSKVEIDSLAASLILKHFFEEGGTNNAEKVKPSTGVVTAEVWRAAGRDGEEGEEDESXXXXXEDAYGEGSRRRFQEMREESARSAAAGEDSARRRAWRKRRRR 296

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BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot
Match: A0A7S3X7E5_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X7E5_EMIHU)

HSP 1 Score: 93.2 bits (230), Expect = 5.720e-19
Identity = 58/136 (42.65%), Postives = 80/136 (58.82%), Query Frame = 0

Query:   86 RTMCVDYGTFRVGLAIGVGISPRTVPGITNRGSDLE-VARQVLVRARGEGIRDIVASLPHLPDGSETEMCAIVRSFASVLADVGAVSRPSAGVFLWDERFSSAQAGAMLDPYGGGMSRKVEIDSLAASLILEHFFQ 220
            RT+ VD+G  R GLA+  GI+P  +  I ++ ++L  VA QV+  AR EG   +V  +P+   G E E     R F  +LA   A  RP   V+LWDERFSSA+A +M    G G +R   ID +AA++ILE FF+
Sbjct:   62 RTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLAREAA-PRP---VYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFFE 192

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BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot
Match: R1ED05_EMIHU (YqgFc domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ED05_EMIHU)

HSP 1 Score: 93.2 bits (230), Expect = 6.630e-19
Identity = 58/136 (42.65%), Postives = 80/136 (58.82%), Query Frame = 0

Query:   86 RTMCVDYGTFRVGLAIGVGISPRTVPGITNRGSDLE-VARQVLVRARGEGIRDIVASLPHLPDGSETEMCAIVRSFASVLADVGAVSRPSAGVFLWDERFSSAQAGAMLDPYGGGMSRKVEIDSLAASLILEHFFQ 220
            RT+ VD+G  R GLA+  GI+P  +  I ++ ++L  VA QV+  AR EG   +V  +P+   G E E     R F  +LA   A  RP   V+LWDERFSSA+A +M    G G +R   ID +AA++ILE FF+
Sbjct:   26 RTLGVDFGLRRTGLAVSAGIAPLPIGIIDDQSANLTAVAAQVVRAARSEGASQLVLGMPYNSSGGEGEQAVATRRFGELLAREAA-PRP---VYLWDERFSSAEA-SMRANAGDGAARGQSIDDVAAAIILEEFFE 156

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BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot
Match: A0A7S2ZDD4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDD4_9RHOD)

HSP 1 Score: 90.5 bits (223), Expect = 6.070e-18
Identity = 62/148 (41.89%), Postives = 80/148 (54.05%), Query Frame = 0

Query:   85 RRTMCVDYGTFRVGLAIGVGISPRTVPGITNRGSDLEVARQVLVRARGEGIRDIVASLPHLPDGSETEMCAIVRSFASVLADVGAVSRPSAGVFLWDERFSSAQAGAMLDPYGGGMSRK-----VE--IDSLAASLILEHFFQEGGAD 225
            ++T+ VDYG  RVGLA+ VGI+PR +  I NRG+  EVAR++   AR E +  +V  LP    G E E  A  R F   L     ++ P   ++LWDERFS+  A   L      MS K     VE  +DS AA  ILE FF+  G D
Sbjct:   22 KKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLNSKGDEGEQAAATRKFCEYLR----IALPEPPIYLWDERFSTQTARNRL------MSSKTYRNQVENFVDSEAAVAILEDFFENSGDD 159

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BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot
Match: A0A7S3E813_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E813_9RHOD)

HSP 1 Score: 80.1 bits (196), Expect = 1.280e-14
Identity = 45/105 (42.86%), Postives = 61/105 (58.10%), Query Frame = 0

Query:   85 RRTMCVDYGTFRVGLAIGVGISPRTVPGITNRGSDLEVARQVLVRARGEGIRDIVASLPHLPDGSETEMCAIVRSFASVLADVGAVSRPSAGVFLWDERFSSAQA 189
            ++T+ VDYG  RVGLA+ VGI+PR +  I NRG+  EVAR++   AR E +  +V  LP    G E E  A  R F   L     ++ P   ++LWDERFS+  A
Sbjct:   22 KKTLAVDYGLRRVGLALSVGIAPRRLNKIYNRGNLGEVARRISDVARREMVLQVVVGLPLNSKGDEGEQAAATRKFCEYLR----IALPEPPIYLWDERFSTQTA 122

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BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot
Match: A0A8J2T1I1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1I1_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.470e-14
Identity = 53/133 (39.85%), Postives = 72/133 (54.14%), Query Frame = 0

Query:   87 TMCVDYGTFRVGLAIGVGISPRTVPGITNRGSDLEVARQVLVRARGEGIRDIVASLPHLPDGSETEMCAIVRSFASVLADVGAVSRPSAGVFLWDERFSSAQAGAMLDPYGGGMSRKVEIDSLAASLILEHFF 219
            T+ VDYG  RVG+ +GVG + R +  I +      V  ++L  AR E I  IV  LP   DG+E   CA  R FA  LA     + P+  + LWDERFSS +A A+L    G       +D++AA +IL+ FF
Sbjct:   78 TLGVDYGLRRVGVCVGVGFASRPLEVIEHDEDIDAVVARLLQIARRERIASIVVGLPLEKDGAEGLQCAATRRFADALA----AAAPATPLVLWDERFSSREAEALLAHRPGAA-----LDAVAACVILDDFF 201

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BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot
Match: A0A7S2WGV2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGV2_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.020e-13
Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = 0

Query:   84 SRRTMCVDYGTFRVGLAIGVGISPRTVPGITNRGSDLEVARQVLVRARGEGIRDIVASLPHLPDGSETEMCAIVRSFASVLADVGAVSRPSAGVFLWDERFSSAQAGAMLDPYGGGMSRKVE------IDSLAASLILEHFFQEGGADNAEKVESSTGVVAAEVL 242
            +R  + VDYGT R+GLA+  G SPR V  I + G+  E+  ++L  A+GE    +V   P   DG E     + R+F  VLA   A      GV++ DER+SSA+A A L      +S+K +      +D+ +A  IL  FF E    + E++   T ++ AE L
Sbjct:   56 NRLALGVDYGTRRIGLAMSAGFSPRPVLTIKHTGNTTEMVHKILNIAKGEDAELLVVGNPLNQDGEENFQSDLTRNFTQVLASEVARRSLKLGVYMKDERYSSAEAEANLQ----FVSKKSKGRMLAVLDAESACSILRAFFNEPVDSSVERI---TPLMEAEAL 213

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BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot
Match: A0A7S3F3A2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F3A2_9EUKA)

HSP 1 Score: 75.5 bits (184), Expect = 1.050e-12
Identity = 51/125 (40.80%), Postives = 67/125 (53.60%), Query Frame = 0

Query:   98 GLAIGVGISPRTVPGITNRGSDLE---VARQVLVRARGEGIRDIVASLPHLPDGSETEMCAIVRSFASVLADVGAVSRPSAGVFLWDERFSSAQAGAMLDPYGGGMSRKVEIDSLAASLILEHFF 219
            G+A+  G SP  +  ++  GS  +   VA Q+   A GEG   IV  LP    G E E   + R FAS LA    +      VFLWDERFSSA+A   ++  G G S    ID++AA++ILE FF
Sbjct:    1 GVALSSGFSPIPLTVVSCNGSKEDFPQVASQICRIALGEGASQIVLGLPLNSSGGEGEQAVVTREFASSLACASQLP-----VFLWDERFSSAEASMRMNS-GRGASAGQTIDAVAAAIILEEFF 119

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BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot
Match: A0A7S4J4M8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4M8_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.570e-12
Identity = 55/152 (36.18%), Postives = 79/152 (51.97%), Query Frame = 0

Query:   86 RTMCVDYGTFRVGLAIGVGISPRTVPGITNRGSDLEVARQVLVRARGEGIRDIVASLPHLPDGSETEMCAIVRSFASVLADVGAVSR--PSAGVFLWDERFSSAQAGAML----------DPYGGGMSRKVEIDSLAASLILEHFFQEGGAD 225
            +++ VD+G  R GLA+ +G SP  +  I +  ++  +  +V+  A  EG    V  LP   +G+E+E   + R+FAS LA  GA     P   V +WDER+SS  A A            DP  G M     +D+ AA LILEH++ EGG D
Sbjct:  193 KSIGVDFGLARTGLAVTIGYSPHPLA-IASGMNETALVGEVMRLAESEGATRAVVGLPLHKNGTESERSGLTRTFASKLA-AGAYGHFGPRFRVDMWDERYSSKMAAAKAVAASRRRGGEDP--GRMDLYGSLDADAACLILEHYYAEGGED 340

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BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot
Match: A0A7S0L5P9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5P9_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 4.180e-11
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0

Query:   86 RTMCVDYGTFRVGLAIGVGISPRT-----VPGITNR--GSDLEVARQVLVRARGEGIRDIVASLPHLPDGSETEMCAIVRSFASVLADVGAVSRPSAGVFLWDERFSSAQAGAMLDPYGG-GMSRKVEIDSLAASLILEHFF 219
            R++ VD GT R G+A+  G +P       VP       G   ++ + V   A+ EG+  IV  +P+   G E +     R FA +LA+V  +      VFLWDERFS+A+A   +  +GG G +    +D++AA++ILE F+
Sbjct:   16 RSLGVDLGTVRTGIAVSSGYAPLPLTVLRVPRAAEEPVGDVSQLVQLVCNAAQREGVDQIVVGMPYNHTGGEGKQAQYTRQFAQMLANVARLP-----VFLWDERFSTAEAQHRM--HGGFGAASGEAVDAVAAAVILEAFY 150

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig201.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRK7_ECTSI	1.840e-112	71.65	YqgFc domain-containing protein n=2 Tax=Ectocarpus...	[more]
A0A7S3X7E5_EMIHU	5.720e-19	42.65	Hypothetical protein (Fragment) n=1 Tax=Emiliania ...	[more]
R1ED05_EMIHU	6.630e-19	42.65	YqgFc domain-containing protein n=2 Tax=Emiliania ...	[more]
A0A7S2ZDD4_9RHOD	6.070e-18	41.89	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A7S3E813_9RHOD	1.280e-14	42.86	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A8J2T1I1_9STRA	1.470e-14	39.85	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]
A0A7S2WGV2_9STRA	2.020e-13	35.15	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S3F3A2_9EUKA	1.050e-12	40.80	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]
A0A7S4J4M8_9STRA	3.570e-12	36.18	Hypothetical protein n=2 Tax=Odontella aurita TaxI...	[more]
A0A7S0L5P9_9EUKA	4.180e-11	34.51	Hypothetical protein n=1 Tax=Coccolithus braarudii...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006641	YqgF/RNase H-like domain	SMART	SM00732	rnase_8s	coord: 85..189 e-value: 0.0066 score: 24.8
IPR037027	YqgF/RNase H-like domain superfamily	GENE3D	3.30.420.140		coord: 84..230 e-value: 7.8E-21 score: 76.4
IPR005227	Putative pre-16S rRNA nuclease	PFAM	PF03652	RuvX	coord: 86..220 e-value: 4.6E-18 score: 66.0
IPR005227	Putative pre-16S rRNA nuclease	PANTHER	PTHR33317	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN	coord: 73..254
IPR005227	Putative pre-16S rRNA nuclease	HAMAP	MF_00651	Nuclease_YqgF	coord: 85..223 score: 14.636415
IPR005227	Putative pre-16S rRNA nuclease	CDD	cd16964	YqgF	coord: 88..221 e-value: 5.64581E-27 score: 100.64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..29
None	No IPR available	PANTHER	PTHR33317:SF4	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN	coord: 73..254
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 85..220

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig201	contig	P-littoralis_Contig201:129572..137608 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig201.30.1	mRNA_P-littoralis_Contig201.30.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig201 129572..137608 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig201.30.1 ID=prot_P-littoralis_Contig201.30.1|Name=mRNA_P-littoralis_Contig201.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=303bp
SSSASSSGSLKDSDSNKEGDIKFHRDCEDEDNDDSDEDDFDDDDIHPSVA
WLYPASSLTSLPTPGGGESIGSSGRKQKKNRTPSRRTMCVDYGTFRVGLA
IGVGISPRTVPGITNRGSDLEVARQVLVRARGEGIRDIVASLPHLPDGSE
TEMCAIVRSFASVLADVGAVSRPSAGVFLWDERFSSAQAGAMLDPYGGGM
SRKVEIDSLAASLILEHFFQEGGADNAEKVESSTGVVAAEVLLAAGRKGK
ADEEEERRGEREEDAYGEGSRRRFQEMREESARSVAAGEDVSKKYSRKRR
KR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006641	YqgF/RNaseH-like_dom
IPR037027	YqgF/RNaseH-like_dom_sf
IPR005227	YqgF
IPR012337	RNaseH-like_sf